Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995233.1:2100423-2103250[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 6e-06 0.00028 21.5 0.4 1 23 257 279 257 279 0.98

2 11 1e-05 0.00046 20.8 5.9 1 23 313 335 313 335 0.98

3 11 8.8e-06 0.00041 21.0 3.8 1 23 341 363 341 363 0.98

4 11 1.2e-05 0.00056 20.6 3.2 1 23 369 391 369 391 0.98

5 11 8.8e-06 0.00041 21.0 3.8 1 23 397 419 397 419 0.98

6 11 2.5e-05 0.0012 19.6 3.7 1 23 425 447 425 447 0.98

7 11 0.00012 0.0054 17.5 6.5 1 23 453 475 453 475 0.98

8 11 0.00051 0.023 15.5 3.6 1 23 481 503 481 503 0.97

9 11 0.00046 0.021 15.6 3.7 1 23 509 531 509 531 0.98

10 11 0.00026 0.012 16.4 3.3 1 23 537 559 537 559 0.98

11 11 0.00045 0.021 15.6 4.1 1 23 565 587 565 587 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	6e-06	0.00028	21.5	0.4	1	23	257	279	257	279	0.98
2	11	1e-05	0.00046	20.8	5.9	1	23	313	335	313	335	0.98
3	11	8.8e-06	0.00041	21.0	3.8	1	23	341	363	341	363	0.98
4	11	1.2e-05	0.00056	20.6	3.2	1	23	369	391	369	391	0.98
5	11	8.8e-06	0.00041	21.0	3.8	1	23	397	419	397	419	0.98
6	11	2.5e-05	0.0012	19.6	3.7	1	23	425	447	425	447	0.98
7	11	0.00012	0.0054	17.5	6.5	1	23	453	475	453	475	0.98
8	11	0.00051	0.023	15.5	3.6	1	23	481	503	481	503	0.97
9	11	0.00046	0.021	15.6	3.7	1	23	509	531	509	531	0.98
10	11	0.00026	0.012	16.4	3.3	1	23	537	559	537	559	0.98
11	11	0.00045	0.021	15.6	4.1	1	23	565	587	565	587	0.98

Sequence Information

Coding Sequence: ATGATATGCCTGGACACTCGCAGCAAGCTGTTTCTGATGAGTAAATACCAGTTGGAAGAAGCATATGAACATTTAGTGGGACATCCTTTGTGTGGTCAAGGAAAGCTCAAACAAACGCTTTGTATGCAATGTGCCCAGAGACTGGTGAACTTTAGCGCATTCAGAGACAAGAGCTTGAGAGCGCGCTCCCTGATGATGGAGCTACTTGACAGACATGAAGTGATAACTATACGACATGTCAAATTGATAAGCCGCGTAAAATACCAACTACAGTCCGACATTGTCTCGGCGGTGTCGGAGCCCGACTACTGCGATGTGTACATAGCACACTCCGACGCGGACGGACGGACAGAACTAGACGCGACTGCCGCAACTGACGAAGCAGTTGCAGTCAAACGGGAAGCCGAGCCAGCCGCCGCCCAAACAGAGTTATATCCTTTCAGCCACATGATTCCCAAGCCGGAGTCGTCGGGGGACTGCGAGCAAGCTTCGGTCGCTCCTTCGGTACTCGCGACCAATCACGGAAACGAAGAACATCCGACTGATACAGGCGACGAGTTGGATATATTGTCTTTCGAAAATAATACAAACATTTTTGAATATTCAGGGAAATCCCAGGACCCCTTACTAAAACTGAAGGAATCGTTGGCGAAAATAAGTGATAATATCAATTTGCCAACAGCAAGGCCAAATGTTCTTTTGAAAAACGAACACAATTCCCAGGATATATCCAGTACACAGTTAGGAAACTATACTGACCAGATACAGTATATCTGTGACGTGTGCCAAAAGATATTTCAACGGAAAAGTTCCTTAGTTACCCACATTAGGGCGCACACTTACGCAAACACTTTCTCATGTAAGTTAAGAGAGCGCAAATTCACTCAAAGTAGGACGTCATCGAGCCCCAGGAGGACTCACACTGGCGATAAGCCTTTTGTGTGCAAGTTATGTAATTACAAATGTGCACGAAATAGTCATTTAGTGCGTCACATGAGGACTCACACTGGCGAAAAGCCTTTCGTGTGTAAGTTGTGCAATTATAAATGTACAGTAAACAGTAATTTAGTGAAGCACATGAGGACTCACACTGGCGATAAGCCTTTCGTGTGTAAGTTGTGTGATTATAAATGTACAGTAAACAGTAGTTTAGTGAAGCACATGAGGACTCACACTGGCGAAAAGCCTTTCGTGTGTAAGTTGTGCAATTATAAATGTACAGTAAACAGTAATTTAGTGAAGCACATGAGGACTCACACTGGCGATAAGCCTTTCGTGTGTAAGTTGTGCAATTATAAATGTACAGTAAACAGTAGTTTAGTGAAGCACATGAGGACTCACACTGGCGAAAAACCTTTCGCTTGTAAGTTATGTAAATACAAATGTACACAAAATAGTCATTTAGTGAGTCACATGAGGACTCACACTGGCGAAAAACCTTTCGCTTGTAAGTTATGTAAATACAAATGTACAGTAAACAGTAGTTTAGTGAGTCACATGAAGACTCACACTGGCGAAAAACCTTTCGCTTGTAAGTTATGTAAATACAAATGTACAGAAAATGGTAAGTTAGTGCGTCACATGAGGACTCACACTAGCGAAAAGCCTTTCGCTTGTAAGTTATGTAAATACAAATGTACAGAAAATGGTAGTTTAGTGAAGCACATGAGGACTCACACTGGCGAAAAGCCTTTCGCTTGTAAGTTATGTAAATACAAATGTACAGTAACCAGTAGTTTAGTGAAGCACATGAGGACTCACACTGGCTAA
Protein Sequence: MICLDTRSKLFLMSKYQLEEAYEHLVGHPLCGQGKLKQTLCMQCAQRLVNFSAFRDKSLRARSLMMELLDRHEVITIRHVKLISRVKYQLQSDIVSAVSEPDYCDVYIAHSDADGRTELDATAATDEAVAVKREAEPAAAQTELYPFSHMIPKPESSGDCEQASVAPSVLATNHGNEEHPTDTGDELDILSFENNTNIFEYSGKSQDPLLKLKESLAKISDNINLPTARPNVLLKNEHNSQDISSTQLGNYTDQIQYICDVCQKIFQRKSSLVTHIRAHTYANTFSCKLRERKFTQSRTSSSPRRTHTGDKPFVCKLCNYKCARNSHLVRHMRTHTGEKPFVCKLCNYKCTVNSNLVKHMRTHTGDKPFVCKLCDYKCTVNSSLVKHMRTHTGEKPFVCKLCNYKCTVNSNLVKHMRTHTGDKPFVCKLCNYKCTVNSSLVKHMRTHTGEKPFACKLCKYKCTQNSHLVSHMRTHTGEKPFACKLCKYKCTVNSSLVSHMKTHTGEKPFACKLCKYKCTENGKLVRHMRTHTSEKPFACKLCKYKCTENGSLVKHMRTHTGEKPFACKLCKYKCTVTSSLVKHMRTHTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954850;
90% Identity: iTF_00954850;
80% Identity: -