Mjur012155.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola jurtina
Gene Symbol
-
Assembly
GCA_905333055.1
Location
HG995236.1:5110501-5119103[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.15 6.8 7.7 0.4 6 23 277 294 277 294 0.98
2 14 5.1e-05 0.0024 18.6 1.2 1 23 391 413 391 413 0.99
3 14 3.9e-05 0.0018 19.0 2.2 1 23 419 441 419 441 0.98
4 14 0.00049 0.022 15.5 3.9 1 23 447 469 447 469 0.99
5 14 1.9e-06 8.8e-05 23.1 1.9 1 23 475 497 475 497 0.99
6 14 8e-06 0.00037 21.1 1.8 1 23 503 526 503 526 0.97
7 14 0.00045 0.021 15.6 3.8 2 23 533 554 532 554 0.97
8 14 3.8e-05 0.0017 19.0 4.1 1 23 560 582 560 582 0.99
9 14 1.1e-05 0.00049 20.8 1.7 1 23 588 610 588 610 0.98
10 14 0.0008 0.037 14.9 1.9 2 23 617 638 616 638 0.97
11 14 0.0053 0.24 12.3 2.4 1 23 644 666 644 666 0.97
12 14 1.5e-05 0.00069 20.3 3.2 1 23 672 694 672 694 0.99
13 14 0.0061 0.28 12.1 3.3 1 23 700 723 700 723 0.98
14 14 0.53 25 6.0 0.3 1 16 729 744 729 746 0.92

Sequence Information

Coding Sequence
ATGCGTTGTTGTGTACCTTACTGCGAAAACACTTCCACCAATGTGTCCACATCAGATTCGAAGGGGATTAGTTTTCACGGTCTCCCCAGTGATGTGTGTCTGCGCGCTGCTTGGCTCAGAGCCCTCGGCAAACAACACAGTCAGCTACCAGACTCTGCTGTGGTCTGCTCCCAGCATTTTCTTGATGATGAAATTTATGAAACAGAAAGTGGCTTAAGGCAGATTGCTGCTGGTGCTGTTCCTTCAACAGTGCAGGTTTGCATGATATGCCTAGACACTGACAGCAAGCTGTATCCAATGAGTAAACACAAATTGGAAGAAGCATATGAAAGGTTAACAGGATATCCATTGTATGATCAAGGAAACCTAAAACAAACACTTTGTTTACAATGTGCTCAGAGACTGTTAAACTTTAGTAGATTCAGAGACAAGAGCTTGAGAGCCCGTGCACTGATGATGGACTTAGTTGAAAAACATGAATTTATAACAAGACAACATATAAAGATGATAAACCTCACAAAGAACCAACTAAACAGTGATCTTGTGGTGACAATGCTAGGACCTGACCACTGCGACTTGTACATACTGGACTCCACAGACAAACAGACAGAATCAGAGCCAATCCAATATATTAGTGTGGTGAAAAATGAAGAAAGTTATGACTCGCCGGTTGATGAAGACATGGAAGTGGCAGAGGAAGATGACAATACTGCAGACAATGTCAATGAGGAATTCTTATCCGAAAGTGAGATAATAATGGAAGCGAAACAATTGGCTGAAATGCCAGATCCGTTAAAGTATGAAACTACTGCCTTCCTATACTCTCCTTGTTCCGAGGAGTTTGTCAGTGAACATGCGTACATGCAACATATGCGCATGCATGACCAGAAAGTTTGTGGAGATGCTGACTGTGGCACGTCTCAAGTATGCAAGCCTCATACAGCCGTGAGCTCCTCACACTCTCCACACCTCACTGAGAACAAGTCAGTACATATACCAATACTATTTCACATCGCTCCTCTGTCCGCGAGACTTGCGACGAATAACGGAAACAAAGTGCAAGCTGAAGACGCCGATACAGTCCAGAAGAGTAAACTATTTAAAATCAACAATGCGGAACTACACAAGAATTACTACAGTGAAGGTAGTTTACCAATTGAGAAAAATTGGTATACTTGTGATGTATGTAGAAATACGTATGATCGGAAAAGTCTATTAGTCAAACACATAAAGACTCACACTGATATAAAACCATTCGCTTGCAACATTTGCCCATTCAAAACTAAATATAAATATAGTTTAACTACTCACATGCGAACTCACACGGGTGAAAAACTATTTACTTGCAAGCTATGCGACTACCAGTGCGCATTCAATAGTAATTTCGTGCTACACATGAGAACTCACACGGGTGAAAAACCCTACACGTGTAAGTTGTGTGAATATAAATTTGCAAGAAATTATGATTTGATAAGGCATATGAAATCCCACACAGGTGAAAAGCCTTTCAATTGTGAGCTATGCGAATACAAATTTTCCGATAAACGCAATTTAGTGAACCACATGAGAAGAACTCACACAGGTGATAAGTCTGTTAGTTGCACTCTATGCGAATATAAATGTGCGTCTAATAGTAATTTAGTGCATCACATGAAGACTCACAGCGCTTCGAGGTCGTATACATGTAAAATGTGCAACTATATATGCGCGCGAAGTAATCATCTGGTGGCGCACATGAGAACTCACACGGGTGAGAAACCTTACGCTTGTAATGTATGCGAGTACAAATGTGCGCAAAATAGTAATTTATTGAGCCACATGAGAACCCACACGCGTGATAAGCCTGTTAGTTGCGAACTGTGCAAATACAAATGTGCGGACGAACGCACTTTAGTGAGGCACATGAGAACTCACACGCGTGGAAAATGTTTCGCTTGCGAGCTATGCGACTACAAATGTGCATCCAGTAGTAATTTTGTGTTCCACATGAGAACTCACACGGGTGAAAAACCCTACACGTGTAATTTGTGTGAATATAAATTTGCAAGAAACTGTGATTTAATAAGGCACTTGAGAACTCACACGGGTGAAAAACCTTATAGCTGCGAGCTATGCAAATTCAAATGTGTGGACAAACGTAATTTAGTGAGCCACGTGAGAAGGACTCACTCTGGTGAAAAGCCTTTTAGCTGTGATTTATGCGAGATTAAATTTGCTTACAAATATCAGTTGTTATCGACCACGCGGGTATATCGGCGCGGCGATCCGAAATGCTACAGTACGGAACCTACCACCCTTCTAGCGGTGCGGAGCTCTAACGTGTCGCGGGACTCTAATCAACGGACGACCGAGGGTGGGTGTCGCGCGCGCGAGGGGAGAGACGGCGGAGCTGGTTACGGGGCAACGGGTTGCCGCGTACTCCAACACCTCCAGCGTCTATCCTGTGGTTGCGTCTGCCCGAGTTCCCGCGAGCCGACACAGTGTCCACAGAACGACTGGCTGCAGTCGGCGGCCGCGGGCGTTATATACCCGCCCGCGGGTGTCGGTCGGCGGGAGGGCGGCGCGGTGGCGTCGACGGATCATGCATTCGCTGCGTGGCTGGAATTTTCCATCATATCTCGTCGGTGCGGGTACTTCGGTTTGCTTCGCTACAAGTTTTTTTTTGTTTGA
Protein Sequence
MRCCVPYCENTSTNVSTSDSKGISFHGLPSDVCLRAAWLRALGKQHSQLPDSAVVCSQHFLDDEIYETESGLRQIAAGAVPSTVQVCMICLDTDSKLYPMSKHKLEEAYERLTGYPLYDQGNLKQTLCLQCAQRLLNFSRFRDKSLRARALMMDLVEKHEFITRQHIKMINLTKNQLNSDLVVTMLGPDHCDLYILDSTDKQTESEPIQYISVVKNEESYDSPVDEDMEVAEEDDNTADNVNEEFLSESEIIMEAKQLAEMPDPLKYETTAFLYSPCSEEFVSEHAYMQHMRMHDQKVCGDADCGTSQVCKPHTAVSSSHSPHLTENKSVHIPILFHIAPLSARLATNNGNKVQAEDADTVQKSKLFKINNAELHKNYYSEGSLPIEKNWYTCDVCRNTYDRKSLLVKHIKTHTDIKPFACNICPFKTKYKYSLTTHMRTHTGEKLFTCKLCDYQCAFNSNFVLHMRTHTGEKPYTCKLCEYKFARNYDLIRHMKSHTGEKPFNCELCEYKFSDKRNLVNHMRRTHTGDKSVSCTLCEYKCASNSNLVHHMKTHSASRSYTCKMCNYICARSNHLVAHMRTHTGEKPYACNVCEYKCAQNSNLLSHMRTHTRDKPVSCELCKYKCADERTLVRHMRTHTRGKCFACELCDYKCASSSNFVFHMRTHTGEKPYTCNLCEYKFARNCDLIRHLRTHTGEKPYSCELCKFKCVDKRNLVSHVRRTHSGEKPFSCDLCEIKFAYKYQLLSTTRVYRRGDPKCYSTEPTTLLAVRSSNVSRDSNQRTTEGGCRAREGRDGGAGYGATGCRVLQHLQRLSCGCVCPSSREPTQCPQNDWLQSAAAGVIYPPAGVGRREGGAVASTDHAFAAWLEFSIISRRCGYFGLLRYKFFFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00954610;
90% Identity
iTF_00954604;
80% Identity
iTF_00954610;