Mjur011693.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola jurtina
Gene Symbol
-
Assembly
GCA_905333055.1
Location
HG995236.1:857987-877474[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.32 15 6.7 3.6 1 23 257 279 257 279 0.97
2 16 0.0026 0.12 13.2 0.3 1 23 437 459 437 459 0.98
3 16 0.0069 0.32 11.9 7.6 1 23 465 487 465 487 0.98
4 16 0.00059 0.027 15.3 6.9 1 23 493 515 493 515 0.99
5 16 0.00044 0.02 15.7 5.4 1 23 521 543 521 543 0.99
6 16 0.00018 0.0081 16.9 5.2 1 23 549 571 549 571 0.99
7 16 9.9e-05 0.0046 17.7 6.0 1 23 577 599 577 599 0.99
8 16 0.00018 0.0081 16.9 5.2 1 23 605 627 605 627 0.99
9 16 0.00059 0.027 15.3 6.9 1 23 633 655 633 655 0.99
10 16 0.00044 0.02 15.7 5.4 1 23 661 683 661 683 0.99
11 16 0.00044 0.02 15.7 5.4 1 23 689 711 689 711 0.99
12 16 0.00018 0.0081 16.9 5.2 1 23 717 739 717 739 0.99
13 16 3.7e-05 0.0017 19.1 2.4 1 23 745 767 745 767 0.99
14 16 2.6e-05 0.0012 19.6 5.4 1 23 773 795 773 795 0.99
15 16 0.00018 0.0081 16.9 5.2 1 23 801 823 801 823 0.99
16 16 0.00088 0.041 14.7 9.4 1 23 829 851 829 851 0.98

Sequence Information

Coding Sequence
ATGCAGTGTTGTGTGCCTTACTGCAAAAATACTTCGGACAATGTGTCCACATCACACGAGGAGGGGAAGGCGATTAGTTTTCATGGTTTCCCCAGTGAAGTGAATCTCCGTGGGGCTTGGCTCAGAGCCCTCGGCAAACAAGACAACCTGCCAGACTCTGCTGTGGTCTGCTCGCAGCATTTTCTAAATGATGAAATCTATGAAACAGACAGTGGTGTAAGGCAAATTAGTACTGGTGCTATTCCTTCAACAGTGCAGGTTTGCATGATATGCCTAGACACTGACAGCAAGCTGTATCTAATGAGTAAACACAAATTGGAAGAAGCTTATGAAAATTTAACCGGACATCCTTTGTGTGATCAAGGAAACCTAAAACAAACACTTTGCATACAATGTGCTCAGAGATTAATAAACTTTAGCAGATTCAGAGACAAGAGCTTGAGAGCCCGTGCACTGATGATGGATTTAGTTGAAAAACATGAATTAATAACAAGCCAACACATAGAAATGATAAACTGCACAAAACACCAACTAAAGAGTAATATGGTGTTGACATCACTAGGACCTGACCACTGTGACTTGCACATACTAGAACACCTCCCGGAAGACAATCAGACAGAATTAGTGGAGACAAGTCACATACTTGAAGTAAAACCTGAAGGAAGTGATGATTCTATGTCGGTTGATGAAGACACAGCAGTGATGAATGAAGGTGGCAGTAATATTTATGATTTTGTTCAGTATCCATTAGAGTACGAAGATGCTTTCTTTCATTGTGCACTTTGTTTGGAGGAATTTGTCCATGAACATGCATACATGCAACATATGAGCATGCATCTGCAGAATGATGACGGTGATGGTGAATGTGACACGTCACAAGTGTGCAAGCCTCATACAGCTGTGAGCTCGAGCTGCTCACACTCTTCACTCATCTCTGAGAACAAGCAGGCAGACCCCAGCCCCTCCGCGCACGCCGCGGAGACCTTAGCCGTTCCTCTGTCCGCGAGTCTTGCAACAATCAACGAGATAAAGGAGCCATCAACTGAGGATGCCGATATGTACAACAGTTGCCAGTACAAAAGACTAACAGATTGTTTTGTCAAACTATATGATATTTTCTCTGACAAAGTTGTCCCAAGACAAGACAGATCACTGACGAAAACACATAAAGCTGTTAGATCTTGTGTGAGTCAGAACATTGCCTCTAAAGATATCAGTTATCAGGCGACGAGTCAGAGTGGAGGCCTTACAACAGAATACAATGAACCAGTCACCAATGAAGAGAATCTTACTGTATCAAAAAGTGTGTACATTTGTGACTTTTGTCAAAAAGTTTTTGAACTAAGATGGGTCCTAGTAAAACACATTCAGCGTCACGCGTTAGTAAAAAGATTTAATTGCGAGATTTGCCAGTACAAATGCAGATATAAAAGTTGTTTTATATTACACATGAGAACTCACACTGGTGAAAAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACCGAAGTAATCATTTAGTGGTGCACATGAGAACTCACACTGGTGAAGAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACGAAAAGAGTAGTTTAGTGAGGCACATGAAAACTCACACTGGTGAAAAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACGAAAAGAGTAGTTTAGTGAGGCACATGAGAACTCACACTGGTGAAAAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACCAAAAGAGTAGTTTAGTGAGGCACATGAAAACTCACTCTGGTGAAAAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACGAAAAGAGTAGTTTAGTGAGGCACATGAGAACTCACACTGGTGAAAAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACCGAAGTAATCATTTAGTGGTGCACATGAGAACTCACACTGGTGAAGAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACGAAAAGAGTAGTTTAGTGAGGCACATGAAAACTCACACTGGTGAAAAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAATGAAAAGAGTAGTTTAGTGAGGCACATGAAAACTCACACTGGTGAAAAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACGAAAAGAGTAGTTTAGTGAGGCACATGAGAACTCACACTGGTGAAAAACCATATTATTGCAAGTTATGCAAGTATAAAGGTAACCAAAAGAGTGATTTAGTGAGGCACATGAGAACTCACACTGGTGAAAAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACCAAAAGAGTGATTTAGTGAGGCACATGAGAACTCACACTGGTGAAAAACCATATTCTTGCAAGTTATGCAAGTATAAATGTAACGAGAAGAGTAGTTTAGTGAGGCACATGAGAACTCACACTGGTGAAACCCCATATCATTGCAAGTTATGCAAGTATAAATGTAAACAAAATAGTCATTTAGTGGTGCACATGAGAACTCACATTGGTTAA
Protein Sequence
MQCCVPYCKNTSDNVSTSHEEGKAISFHGFPSEVNLRGAWLRALGKQDNLPDSAVVCSQHFLNDEIYETDSGVRQISTGAIPSTVQVCMICLDTDSKLYLMSKHKLEEAYENLTGHPLCDQGNLKQTLCIQCAQRLINFSRFRDKSLRARALMMDLVEKHELITSQHIEMINCTKHQLKSNMVLTSLGPDHCDLHILEHLPEDNQTELVETSHILEVKPEGSDDSMSVDEDTAVMNEGGSNIYDFVQYPLEYEDAFFHCALCLEEFVHEHAYMQHMSMHLQNDDGDGECDTSQVCKPHTAVSSSCSHSSLISENKQADPSPSAHAAETLAVPLSASLATINEIKEPSTEDADMYNSCQYKRLTDCFVKLYDIFSDKVVPRQDRSLTKTHKAVRSCVSQNIASKDISYQATSQSGGLTTEYNEPVTNEENLTVSKSVYICDFCQKVFELRWVLVKHIQRHALVKRFNCEICQYKCRYKSCFILHMRTHTGEKPYSCKLCKYKCNRSNHLVVHMRTHTGEEPYSCKLCKYKCNEKSSLVRHMKTHTGEKPYSCKLCKYKCNEKSSLVRHMRTHTGEKPYSCKLCKYKCNQKSSLVRHMKTHSGEKPYSCKLCKYKCNEKSSLVRHMRTHTGEKPYSCKLCKYKCNRSNHLVVHMRTHTGEEPYSCKLCKYKCNEKSSLVRHMKTHTGEKPYSCKLCKYKCNEKSSLVRHMKTHTGEKPYSCKLCKYKCNEKSSLVRHMRTHTGEKPYYCKLCKYKGNQKSDLVRHMRTHTGEKPYSCKLCKYKCNQKSDLVRHMRTHTGEKPYSCKLCKYKCNEKSSLVRHMRTHTGETPYHCKLCKYKCKQNSHLVVHMRTHIG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00954563;
90% Identity
iTF_00954563;
80% Identity
iTF_00954563;