Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995233.1:5922492-5945742[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.5e-06 6.7e-05 23.5 1.4 1 23 624 646 624 646 0.98

2 15 4.9e-05 0.0022 18.7 8.1 2 23 653 674 652 674 0.97

3 15 0.00035 0.016 16.0 4.5 1 23 680 702 680 702 0.98

4 15 0.00017 0.0076 17.0 5.1 1 23 708 730 708 730 0.96

5 15 0.00014 0.0064 17.3 2.7 1 23 736 758 736 758 0.99

6 15 0.00039 0.018 15.9 5.9 1 23 764 786 764 786 0.99

7 15 6.7e-05 0.0031 18.2 1.3 1 23 792 814 792 814 0.98

8 15 7.4e-06 0.00034 21.3 1.3 1 23 856 878 856 878 0.98

9 15 1.3e-06 5.8e-05 23.7 2.9 2 23 885 906 884 906 0.97

10 15 0.00014 0.0064 17.3 2.7 1 23 912 934 912 934 0.99

11 15 0.0026 0.12 13.3 4.5 1 23 940 962 940 962 0.98

12 15 0.00094 0.044 14.6 2.7 1 23 968 990 968 990 0.98

13 15 2.6e-06 0.00012 22.7 1.9 1 23 996 1018 996 1018 0.98

14 15 0.00012 0.0054 17.5 2.9 1 23 1024 1046 1024 1046 0.96

15 15 8.1e-06 0.00038 21.1 2.5 1 23 1052 1075 1052 1075 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.5e-06	6.7e-05	23.5	1.4	1	23	624	646	624	646	0.98
2	15	4.9e-05	0.0022	18.7	8.1	2	23	653	674	652	674	0.97
3	15	0.00035	0.016	16.0	4.5	1	23	680	702	680	702	0.98
4	15	0.00017	0.0076	17.0	5.1	1	23	708	730	708	730	0.96
5	15	0.00014	0.0064	17.3	2.7	1	23	736	758	736	758	0.99
6	15	0.00039	0.018	15.9	5.9	1	23	764	786	764	786	0.99
7	15	6.7e-05	0.0031	18.2	1.3	1	23	792	814	792	814	0.98
8	15	7.4e-06	0.00034	21.3	1.3	1	23	856	878	856	878	0.98
9	15	1.3e-06	5.8e-05	23.7	2.9	2	23	885	906	884	906	0.97
10	15	0.00014	0.0064	17.3	2.7	1	23	912	934	912	934	0.99
11	15	0.0026	0.12	13.3	4.5	1	23	940	962	940	962	0.98
12	15	0.00094	0.044	14.6	2.7	1	23	968	990	968	990	0.98
13	15	2.6e-06	0.00012	22.7	1.9	1	23	996	1018	996	1018	0.98
14	15	0.00012	0.0054	17.5	2.9	1	23	1024	1046	1024	1046	0.96
15	15	8.1e-06	0.00038	21.1	2.5	1	23	1052	1075	1052	1075	0.97

Sequence Information

Coding Sequence: ATGTATTCTACCTGGAAGCTCAAAGAATTGAAAGACGAATTAAAAAAACGAGGAGGGAGGATAACTGGAAAGAAATCGGAACTTGTAGAAAGGTTAGAAGCCTACGATCGAAATTTTAATTTTGGTCACCAAACCCTGCAAGCTTCTCAAAGCCAAGCAATTGACGTACCTGCTGTAGAACTTTACAAAGACGTTAATAGCTCCACCATATTGCCGAAGATTACCAAACATCATATTCAAAGTTACTTTGATAGATTCAATAAAAATATCTGTGATGCTGTTAAATTGTATGAATCGAGATACCTTCTTGTTTTACGATCAGCAACATCTGGCCAAGATACTTACCTAAAAGGTTATTGCAAGGCATCCATGAAACAACTTCAATACGAGATTAACATCAAATTAAATAATGATGGAATGCCTGAAGAGGCAAACTGTGAATGTGCAGCAGGTGAAGGCAATGAAGCCCACTGTAAACACATTGCTGTGGTGCTTCTTGCAGCAGAAAACATTGTCCAGCAAAAAATAATAATCCTTCATGAAGTTTCTACGTCACAACTACAGACATTCCATAAGCCATCAAGGAAATATTATGCTACTCCATTACGAGCTTCCAGATTCCCATCAAAAAGGGATATAAATAATACTGTCTTCTCGCCATACTTGAAGCAAAACCCTGATTTTGACAAGAAGGCATTTCAATGCAGATTCCAGTCCATGATTCTAAATTATCCACAGTCATCAATGCCTATAAAACAGATATATCCTGTAGCCAGCCAACGAAGCATATGTTTGGACCATGAGTACTTGGAAAAAAGTGCCATAGATTGTTTTTTAGAATCTATGGTATTGCAAAATGTATCAGAACAAAAGATTCTGGAAATAGAAAGGGAGACTCGAGGACAAAGCAATAACCCAAAATGGCATAGTTACAGAAAAACCCATATAACAGCCAGCATTTTTCATACTGTGTGCCATTTAAAAACTGAAAGTTTATTGAAATATTCCAGTCAAATCTTACATAAAACTACAATAAAAACCAAAGCAATGGCACATGGCCCAGACCACTGTGACTTACACATACTACATCATACAAAAGACAACCAGGAAGAATCTGAGGAAAGCAGACTAGAAGGTATCATGAAAATTGAAGGAAACGATGAGTCCACGTCGGCTGATGAAGACATGGAAATGGAGAATGAAGATGACAAAAATTTCATTGATTTTGTTGAGAATCCAGTAAAGTACGAAAGTGCTCCCTTCCAATGTGCATGTTGTTGGGAGGAGTTTGTCCATGAACATGCGCACATGCAACATATGAGCAAGCATGTCCAGCAAGGTGACAGTGCTGGTGAATGTGAGATGTCACAAGAATGCAAGCCTCATACAGCTGTGAGCTCCAGCTCTGCACACTCTGCACTCAGCACTGAGAACAAGCCGGCGGACTTCAGCCCTTCTGCACATACTACTCAAACCTTAGTCGCTCCCCTACCCGCGAGTCTTGCGACAAATAACGAGATACAAGTGCCCCCAACTGAAGAAGCCGATACAAACGTCAGTTGCCGCTACAACAGATCAACAGATTGTTTTGTCAAATTATACGATGTTTTCTCAAAGAAAGTTGTACCAAGACAAGACGGAAAAGCTGTTGTCTTGCGGTCTTGTGTGAGTCAGAACATTGCATCCAAAGATACAGGTTCTCAGGCAACAAGTGAGAACGAAGTCTCTACAACAGAATATGTTGAACCTGTCACTAATAAAGTAAAACTAATCGAATCAAAAACTTTACAAAATAAAACTGATTGTTTGAAGAAGGTCATTGATATACAATGTTTGTTACAAAGTAGTTCACACACGGAGGGAAAAGGTTTCATTTGTGATATTTGTAGAAAAGTGTTTAGACGAAAACGTCTCTTAGTTAAACACATAAAGACTCACGCTGAAGTAAGATGGCTCACTTGCAAGATTTGCCAGTACAAATGTAAATATCAAAGTCATTTGAAGCGTCATATGAGAACCCACACTGGTGACAAGCCATACTCCTGCAAGATATGTGAGTACAAATGTGCACATAGCACTAGTCTAATGCAGCATATGAGAATACACACTGGTATAAAAAATTTCTTGTGTAAGTTATGCGATTACAAATGTGCACATAATAGTAATCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGAAGTAGTATAATAACGCATATGAGAACTCACACGGGTGAAAAGCCATACTCCTGCAAGATATGTGAGTACAAATGTGCACATAGAACCAGTCTAATGCAGCACATGAGAACTCACACTGGTATAAAAAAATTCTCGTGTAAGTTATGCAATTACAAAAGTGCACAAAATGGCACTCTAGTGAGGCACATGAGAACTCACACGGGTGAAAAGCCATACTCCTGCAAGATATGCGAGTACAAATGTGCACATAGCACTTGTTTGAAGAATGTCATTGATATACAAAGTTCGTTACAGAGTAGTTCACACACAGAAGGAAAATGTTTCATTTGTGATATTTGTAGAAAATTGTTTAAACAAAAAAGTCTCTTAGTTAAACACATAAAGACTCACGCTGAAGTAAGATGGCTCACTTGCAAGATTTGCCAGTACAAATATAAATATCAAAGTGATTTGAAGCGTCATATGAGAACCCACACGGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGAAGTAGTATAATAACGCATATGAGAACTCACACGGGTGAAAAGCCATACTCCTGCAAGATATGTGAGTACAAATGTGCACATAGAACCAGTCTAATGCAGCATATGAGTATACACACTGGTATAAAAAATTTCTCGTGTATGTTATGCAATTACAAATGTGTACAAAATGGCACTCTAGTGACGCACATGAGAACCCACACGGGTGACCAACCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGTAGTAATCTAATTCAGCATATGAGAATTCACACTGGTATAAAAAATTACTTGTGTAAGTTATGCGATTACAAATGTGCGCAAAATAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGAAAAGCCATACTCCTGCAATATATGCGAGTACAAGTGTTCACGAAGTAGTAATCTAATGAAGCATATTATGAGAGCTCACACTGCCGCTGGTGAAACGCCTTCATCAAGTTCGTGA
Protein Sequence: MYSTWKLKELKDELKKRGGRITGKKSELVERLEAYDRNFNFGHQTLQASQSQAIDVPAVELYKDVNSSTILPKITKHHIQSYFDRFNKNICDAVKLYESRYLLVLRSATSGQDTYLKGYCKASMKQLQYEINIKLNNDGMPEEANCECAAGEGNEAHCKHIAVVLLAAENIVQQKIIILHEVSTSQLQTFHKPSRKYYATPLRASRFPSKRDINNTVFSPYLKQNPDFDKKAFQCRFQSMILNYPQSSMPIKQIYPVASQRSICLDHEYLEKSAIDCFLESMVLQNVSEQKILEIERETRGQSNNPKWHSYRKTHITASIFHTVCHLKTESLLKYSSQILHKTTIKTKAMAHGPDHCDLHILHHTKDNQEESEESRLEGIMKIEGNDESTSADEDMEMENEDDKNFIDFVENPVKYESAPFQCACCWEEFVHEHAHMQHMSKHVQQGDSAGECEMSQECKPHTAVSSSSAHSALSTENKPADFSPSAHTTQTLVAPLPASLATNNEIQVPPTEEADTNVSCRYNRSTDCFVKLYDVFSKKVVPRQDGKAVVLRSCVSQNIASKDTGSQATSENEVSTTEYVEPVTNKVKLIESKTLQNKTDCLKKVIDIQCLLQSSSHTEGKGFICDICRKVFRRKRLLVKHIKTHAEVRWLTCKICQYKCKYQSHLKRHMRTHTGDKPYSCKICEYKCAHSTSLMQHMRIHTGIKNFLCKLCDYKCAHNSNLVTHMRTHTGDKPYSCEICEYKCSQRSSIITHMRTHTGEKPYSCKICEYKCAHRTSLMQHMRTHTGIKKFSCKLCNYKSAQNGTLVRHMRTHTGEKPYSCKICEYKCAHSTCLKNVIDIQSSLQSSSHTEGKCFICDICRKLFKQKSLLVKHIKTHAEVRWLTCKICQYKYKYQSDLKRHMRTHTGDKPYSCEICEYKCSQRSSIITHMRTHTGEKPYSCKICEYKCAHRTSLMQHMSIHTGIKNFSCMLCNYKCVQNGTLVTHMRTHTGDQPYSCEICEYKCSQSSNLIQHMRIHTGIKNYLCKLCDYKCAQNSTLVTHMRTHTGEKPYSCNICEYKCSRSSNLMKHIMRAHTAAGETPSSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -