Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995233.1:6043759-6049834[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.1 97 4.1 4.6 1 23 257 279 257 279 0.96

2 17 1.2e-06 5.8e-05 23.7 1.4 1 23 460 482 460 482 0.98

3 17 1.3e-05 0.00059 20.5 5.3 2 23 489 510 488 510 0.97

4 17 7.2e-06 0.00033 21.3 3.0 1 23 516 538 516 538 0.98

5 17 0.0003 0.014 16.2 4.5 1 23 544 566 544 566 0.98

6 17 0.00014 0.0066 17.2 5.1 1 23 572 594 572 594 0.96

7 17 0.00012 0.0055 17.5 2.7 1 23 600 622 600 622 0.99

8 17 0.00033 0.015 16.1 5.9 1 23 628 650 628 650 0.99

9 17 5.8e-05 0.0027 18.5 1.3 1 23 656 678 656 678 0.98

10 17 0.00024 0.011 16.5 3.4 1 23 720 742 720 742 0.98

11 17 1.1e-06 5e-05 23.9 2.9 2 23 749 770 748 770 0.97

12 17 0.00012 0.0055 17.5 2.7 1 23 776 798 776 798 0.99

13 17 0.0022 0.1 13.5 4.5 1 23 804 826 804 826 0.98

14 17 0.00081 0.037 14.8 2.7 1 23 832 854 832 854 0.98

15 17 2.3e-06 0.00011 22.9 1.9 1 23 860 882 860 882 0.98

16 17 0.0001 0.0046 17.7 2.9 1 23 888 910 888 910 0.96

17 17 1.2e-05 0.00056 20.6 2.1 1 23 916 939 916 939 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.1	97	4.1	4.6	1	23	257	279	257	279	0.96
2	17	1.2e-06	5.8e-05	23.7	1.4	1	23	460	482	460	482	0.98
3	17	1.3e-05	0.00059	20.5	5.3	2	23	489	510	488	510	0.97
4	17	7.2e-06	0.00033	21.3	3.0	1	23	516	538	516	538	0.98
5	17	0.0003	0.014	16.2	4.5	1	23	544	566	544	566	0.98
6	17	0.00014	0.0066	17.2	5.1	1	23	572	594	572	594	0.96
7	17	0.00012	0.0055	17.5	2.7	1	23	600	622	600	622	0.99
8	17	0.00033	0.015	16.1	5.9	1	23	628	650	628	650	0.99
9	17	5.8e-05	0.0027	18.5	1.3	1	23	656	678	656	678	0.98
10	17	0.00024	0.011	16.5	3.4	1	23	720	742	720	742	0.98
11	17	1.1e-06	5e-05	23.9	2.9	2	23	749	770	748	770	0.97
12	17	0.00012	0.0055	17.5	2.7	1	23	776	798	776	798	0.99
13	17	0.0022	0.1	13.5	4.5	1	23	804	826	804	826	0.98
14	17	0.00081	0.037	14.8	2.7	1	23	832	854	832	854	0.98
15	17	2.3e-06	0.00011	22.9	1.9	1	23	860	882	860	882	0.98
16	17	0.0001	0.0046	17.7	2.9	1	23	888	910	888	910	0.96
17	17	1.2e-05	0.00056	20.6	2.1	1	23	916	939	916	939	0.97

Sequence Information

Coding Sequence: ATGCGGTGTTGTGTGCCTTTCTGCAAAAGAACTTCCGACAATGTATCAACATCGGACGGAGAAGGGAAAGCGATCAGTTTTCATGGTTTTCCCCGTGAAATGCATCTCCGTACTGCCTGGCTTAGAGCCCTCGGCAAACAAGACGACCTTCCAGACTCTGCTGTGGTCTGCTCGCAACATTTTCTAAGTGATGACATTTATGAAACAGAAAGTGGCTCAAGGCAAATATGTGCCGGTGCTATTCCTTCCACAGTGCAGGTTTGCATGATATGCCTAGACACTGACAGCAAGCTGTTACTAATGAGTAAACTGAAATTGGATGAAGCATATGAGAAGTTAACCGGAGAGCCTCTGTGTGATCAAGGAAAACTAAAACAGACACTTTGCGTACAATGTGCTCATAGATTGATAAACTTCAGTAGATTTAGAGACAAGAGCTTGAGAGCCCGTGCACTGATGATGGACTTAGTTGAGAAACATGAATCAATAACAAGACACCATATTACAATGATAAATCGCACAAAACACCAACTAACGAGTAATATGGTGGTGACATCGCTGGGCCCTGACCACTGTGACTTACACATACTAGAATATCTCTCAGAAGACAACCAGGAAGAATCGGAGGAAAGCAGACTAGAAGGTATCATGAAAATTGAAGGAAATGATGAGTCCACGTCGGCTGATGAAGACATGGAAATGGAGAATGAAGATGACAAAAATTTAATTGATTTTGTTGAGAATCCAGTAAAATACGAAAGTGCTCCCTTCCAATGTGCATGTTGTTGGGAGGAGTTTGTCCATGAACATGCCTACATGCAACATATGAGCAAGCATGTCCAGCAAGGTGACGGTGATGGTGAATGTGAGACGTCACAAGTATGCAAGCCTCATACAGCTGTGAGCTCCAGCTCTGCACACTCTGCACTCAGCACTGAGAACAAGCAGGCGGACTTCAGCCCTTCTGCACATTCTACTCAAACCTTAGTCGCTCCCCTACCCGCGAGTCTTGCGACAAATAACGAGATACAAGTGCCCCCAACTGAAGAAGCCGATACAAACGTCAGTTGCCGCTACAACAGATTAACAGATTGTTTTGTCAAATTATACGATGTTTTCTCAAAGAAAGTTGTACCAAGACAAGACGGAAAAGCTGTTGTCTTGCGGTCTTGTGTGAGTCAGAACATTGCATCCAAAGATACAGGTTCTCAGGCAACAAGTGAGAACGAAGTCTCTACAACAGAATATGTTGAACCTGTCACTAATAAAGTAAAAGTAATCAAATCAAAAACTTTACAAAATAAAACTGATTGTTTGAAGAAGGTCATTGATATACAATGTTTGTTACAAAGTAGTTCACACACGGAGGGAAAAGGTTTCATTTGTGATATTTGTAGAAAAGTGTTTAGACGAAAACGTCTCTTAGTTAAACACATAAAGACTCACGCTGAAGTAAGATGGCTCACTTGCAAGATTTGCCAGTACAAATGTAAATATCAAAGTGATTTGAAGCGTCATATGAGAACCCACACGGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGAAGTAGTCTAATGAAGCATATGAGAATTCACACGGGTGAAAAGCCATACTCCTGCAAGATATGTGAGTACAAATGTGCACATAGCACTAGTCTAATGCAGCATATGAGAATACACACTGGTATAAAAAATTTCTTGTGTAAGTTATGCGATTACAAATGTGCACATAATAGTAATCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGAAGTAGTATAATAACGCATATGAGAACTCACACGGGTGAAAAGCCATACTCCTGCAAGATATGTGAGTACAAATGTGCACATAGAACCAGTCTAATGCAGCACATGAGAACTCACACTGGTATAAAAAATTTCTCGTGTAAGTTATGCAATTACAAAAGTGCACAAAATGGCACTCTAGTGAGGCACATGAGAACTCACACGGGTGAAAAGCCATACTCCTGCAAGATATGTGAGTACAAATGTGCACATAGCACTTGTTTGAAGAATGTCATTGATATACAAAGTTCGTTACAGAGTAGTTCACACACAGAAGGAAAATGTTTCATTTGTGATATTTGTAGAAAATTGTTTAAACAAAAATGTCTCTTAGTTAAACACATAAAGACTCACGCTGAAGTAAGATGGCTCACTTGCAAGATTTGCCAGTACAAATATAAATATCAAAGTGATTTGAAGCGTCATATGAGAACCCACACGGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGAAGTAGTATAATAACGCATATGAGAACTCACACGGGTGAAAAGCCATACTCCTGCAAGATATGTGAGTACAAATGTGCACATAGAACCAGTCTAATGCAGCATATGAGTATACACACTGGTATAAAAAATTTCTCGTGTATGTTATGCAATTACAAATGTGTACAAAATGGCACTCTAGTGACGCACATGAGAACCCACACGGGTGACCAACCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGTAGTAATCTAATTCAGCATATGAGAATTCACACAGGTATTAAAAATTACTTGTGTAAGTTATGCGATTACAAATGTGCGCAAAATAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGAAAAGCCATACTCCTGCAATATATGCGAGTACAAGTGTTCACGAAGTAGTAATCTAATGCAGCATATTATGAGAGCTCACACTGCCGCTGGTGAAACGCCTTCATCAAGTTCGTGA
Protein Sequence: MRCCVPFCKRTSDNVSTSDGEGKAISFHGFPREMHLRTAWLRALGKQDDLPDSAVVCSQHFLSDDIYETESGSRQICAGAIPSTVQVCMICLDTDSKLLLMSKLKLDEAYEKLTGEPLCDQGKLKQTLCVQCAHRLINFSRFRDKSLRARALMMDLVEKHESITRHHITMINRTKHQLTSNMVVTSLGPDHCDLHILEYLSEDNQEESEESRLEGIMKIEGNDESTSADEDMEMENEDDKNLIDFVENPVKYESAPFQCACCWEEFVHEHAYMQHMSKHVQQGDGDGECETSQVCKPHTAVSSSSAHSALSTENKQADFSPSAHSTQTLVAPLPASLATNNEIQVPPTEEADTNVSCRYNRLTDCFVKLYDVFSKKVVPRQDGKAVVLRSCVSQNIASKDTGSQATSENEVSTTEYVEPVTNKVKVIKSKTLQNKTDCLKKVIDIQCLLQSSSHTEGKGFICDICRKVFRRKRLLVKHIKTHAEVRWLTCKICQYKCKYQSDLKRHMRTHTGDKPYSCEICEYKCSQRSSLMKHMRIHTGEKPYSCKICEYKCAHSTSLMQHMRIHTGIKNFLCKLCDYKCAHNSNLVTHMRTHTGDKPYSCEICEYKCSQRSSIITHMRTHTGEKPYSCKICEYKCAHRTSLMQHMRTHTGIKNFSCKLCNYKSAQNGTLVRHMRTHTGEKPYSCKICEYKCAHSTCLKNVIDIQSSLQSSSHTEGKCFICDICRKLFKQKCLLVKHIKTHAEVRWLTCKICQYKYKYQSDLKRHMRTHTGDKPYSCEICEYKCSQRSSIITHMRTHTGEKPYSCKICEYKCAHRTSLMQHMSIHTGIKNFSCMLCNYKCVQNGTLVTHMRTHTGDQPYSCEICEYKCSQSSNLIQHMRIHTGIKNYLCKLCDYKCAQNSTLVTHMRTHTGEKPYSCNICEYKCSRSSNLMQHIMRAHTAAGETPSSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954578;
90% Identity: -
80% Identity: -