Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995233.1:6566149-6575529[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00077 0.036 14.9 3.6 1 23 336 358 336 358 0.99

2 21 0.00079 0.036 14.9 5.2 1 23 364 386 364 386 0.98

3 21 0.00023 0.011 16.6 0.6 3 23 393 413 391 413 0.96

4 21 0.19 8.8 7.4 0.3 1 23 419 441 419 441 0.96

5 21 0.00042 0.019 15.8 0.8 1 23 448 471 448 471 0.94

6 21 0.00066 0.031 15.1 0.4 1 21 496 516 496 517 0.93

7 21 0.0022 0.1 13.5 8.1 1 23 524 546 524 546 0.98

8 21 0.091 4.2 8.4 5.0 1 19 552 570 552 574 0.95

9 21 2.1e-05 0.00099 19.8 2.4 1 23 597 619 597 619 0.99

10 21 0.0004 0.019 15.8 3.1 1 19 625 643 625 647 0.95

11 21 3.8e-05 0.0018 19.0 2.0 1 23 670 692 670 692 0.99

12 21 0.0004 0.019 15.8 3.1 1 19 698 716 698 720 0.95

13 21 2.1e-05 0.00099 19.8 2.4 1 23 743 765 743 765 0.99

14 21 0.0001 0.0046 17.7 8.9 1 23 771 794 771 794 0.98

15 21 1.1e-05 0.00052 20.7 2.2 1 23 818 840 818 840 0.98

16 21 3.7e-07 1.7e-05 25.3 4.8 1 23 846 868 846 868 0.98

17 21 0.0043 0.2 12.5 0.9 1 23 874 896 874 896 0.98

18 21 0.00033 0.015 16.1 2.8 1 23 902 924 902 924 0.97

19 21 0.00044 0.02 15.7 3.4 1 23 930 952 930 952 0.97

20 21 0.0037 0.17 12.8 9.3 1 23 958 980 958 980 0.98

21 21 0.0084 0.39 11.6 1.5 2 23 986 1007 985 1007 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00077	0.036	14.9	3.6	1	23	336	358	336	358	0.99
2	21	0.00079	0.036	14.9	5.2	1	23	364	386	364	386	0.98
3	21	0.00023	0.011	16.6	0.6	3	23	393	413	391	413	0.96
4	21	0.19	8.8	7.4	0.3	1	23	419	441	419	441	0.96
5	21	0.00042	0.019	15.8	0.8	1	23	448	471	448	471	0.94
6	21	0.00066	0.031	15.1	0.4	1	21	496	516	496	517	0.93
7	21	0.0022	0.1	13.5	8.1	1	23	524	546	524	546	0.98
8	21	0.091	4.2	8.4	5.0	1	19	552	570	552	574	0.95
9	21	2.1e-05	0.00099	19.8	2.4	1	23	597	619	597	619	0.99
10	21	0.0004	0.019	15.8	3.1	1	19	625	643	625	647	0.95
11	21	3.8e-05	0.0018	19.0	2.0	1	23	670	692	670	692	0.99
12	21	0.0004	0.019	15.8	3.1	1	19	698	716	698	720	0.95
13	21	2.1e-05	0.00099	19.8	2.4	1	23	743	765	743	765	0.99
14	21	0.0001	0.0046	17.7	8.9	1	23	771	794	771	794	0.98
15	21	1.1e-05	0.00052	20.7	2.2	1	23	818	840	818	840	0.98
16	21	3.7e-07	1.7e-05	25.3	4.8	1	23	846	868	846	868	0.98
17	21	0.0043	0.2	12.5	0.9	1	23	874	896	874	896	0.98
18	21	0.00033	0.015	16.1	2.8	1	23	902	924	902	924	0.97
19	21	0.00044	0.02	15.7	3.4	1	23	930	952	930	952	0.97
20	21	0.0037	0.17	12.8	9.3	1	23	958	980	958	980	0.98
21	21	0.0084	0.39	11.6	1.5	2	23	986	1007	985	1007	0.97

Sequence Information

Coding Sequence: ATGTCTACTATTCCTTCAGTGGTGCAGGTCTGCATAATATGTCTAGACACAGAGAGCAGGTTACATGTAATGAGTAAATACAAACTGAGGAAGGCGTATGAAAACCTAACTGGACATTCTATTGCTGAAAATGAGTGTAAAGCAAAGTTTCTGTGCTCTGAATGCATCCATAGATTGATGAACTTCACTAATTTTAGATACAAGAGCTTGAGAGCGCGTTCAATTTTGGAATACTTGGTTCGAAAATATGAATATGTAACAATAGATCATATAAAATTAGTTGATCGTAACAAATACCACCTAAGGTCTGATATTGTCAAGACAGTCTTTGAGCCTGGCCACTGCGATTTATATATAGACTGTTCTGACACGGACATACTGACAGAACTAGGCGCAACCGTTGATACACTTGCATTGAAACAGGAAGAGAGACACGGGTATGTGTTGGTTGATGGAGACCACAGTCTGCACATGATTATAAAGAATAAAGATGATGTAGACATACAGACAGATTTAAAAACAGCTTTTGGTAACACCATAGTTAAAACCGAGCATAACTATTATGAAGACCACTTAGACATCAAATCGGAAAGACTAAATGAATATGATGATTGCATTGATAATACAAATTTCTATGTACCAAATGATGGTTATATATCTGATAGTGCTAGTACTTTCATTTTGGAGCCAAAACCGATTCTCGAAGAGCTGTTAGATAAAACTCCGACTTGTACAGAAAACACTCATAATCTGGGCATGGCACCAGATCCAACCATAACAAGGAGTAATAGACATGCAATGGAACAAAATAACTACAAAACTGAAACAGATACAAAATTAGATACAGAATCAACTAAAAAAAAGAAAAAGCTTCAAGACAAACTTGAATTCGAGACAATGAAAAATCTTACACTGTACAATGAATCCAGTAACTTTTGGGAGACAGACAAGGAAGAAAAAAATTTACTGGTGAAGCGTGAAACTAAAAAAGATATAGTGAACCCTTATTCCTGTACTATATGCAATTATAAATGTAAACTAAATATCAGTCTAACCGTGCACATGAGAAAGCATAAAGACGAGAAATATTTCACTTGTGAATTCTGTGACTACAAATTTAAACTTAGACACAGTTTGAATCTACACATGCAAAAACACAGGAACGCAGGAGTGAATTGTGGCTTGTGCAACTCAAAGTTTGATAACAATGATAATCTATACAGACATATGAAAATACACTTTGGTGAAAACTCCTTTGCTTGTAATTTATGTGAATACGAGAATGAAGATAATGTTTCTTTTGTACAACACATGAGAACTCACTCGGGTGATAAGGAATCTTTTTCTTGTCAAATTTGTGATTATGAGTTTATGGGTAAAGATCTTTTGAAGAAACACATGTACCTCACACACGAGAAAGGGTCTGGTGGTGATGTGGAAACACAAAAATCAGTTTTGAAAACCCCGAATCAAAGCGATAAAACTCACGCTTGTGAACAATGCAACTCCAAATTTGTATCAAAAGGCAATTTGATGAGACATATAAAAATATACTGCGGTGAGAAAGTGTTCACTTGTCACTTTTGTGAACGAAAATTCAAAGCTAAATGCGATTTGAAGAGGCACATGTTACGTCACACGACTAAGAAAACTTACCCTTGTGAATATTGTGATCATAAGTTTTCTTGTAAAAGTCATTTGAAAGAGCACGCGTGGATTCACACACAAAATCCCTCCAATACAGGTGTTGAAACTCAAAAATCAGTTGTAGAAACCGTAAACGAAAAGTACGTTTGCGAAATATGCGACTCCAAATTTGTACTAAAGAATCATTTAACGAGACACATGAAGACACACTTTATTGAGAAAAGATATACTTGTCAAGTTTGCAATCATAAGTTTTCTTCTAAAAGTCATTTGAAAGAGCACGCGTGGATTCACACACAAAATCCCTCCAATACAGGTGTTGAAACTCAAAAATCAGTTATAGAAACCTTAAACGAAAGGTACGTTTGCGAAATATGCGACTCCAAATTTGTACTAAAGAATCATTTAACGAGACACATAAAGACACACTTTATTGAGAAAAGATATACTTGTCAAGTTTGCAATCATAAGTTTTCTTCTAAAAGTCATTTGAAAGAGCACGCGTGGATTCACACACAAAATCCCTCCAATACAGGCGTTGAAACTCAAAAATCAGTTATAGAAACCGTAAACGAAAAGTACGTTTGCGAAATATGCGACTCCAAATTTGTACTAAAGAATCATTTAACGAGACACATGAAGACACACTTTATTGAGAAAAGATATACTTGTCAACTTTGCGATCATAAGTTCTCTTCTAAAAGCCATTTGAAAGAGCACATGTGCACCACACATGAGAAAAACTCCATTATTGATTTAGAAACTCAAAATTTTGATTCAGAAAGCTCGAGTGAAGGTAAAAAGTATGCGTGTGAGTTATGCGACTCTAAATTTGCATTAAAAAGTCATCTAACGAGACACATGAGAACGCACTCTGGGAAAAAAGCATTTAAGTGTCATGTATGCCAAAAGAAGTTCTCACAAAACAGCAGTTTAAAAAAGCATATGTTAATTCATACCGGTCACAAACCGTACTCCTGTGAGACTTGCCCCTATAAATGTACTTCCGGAATCGATTTAGTGAACCACCAGCGGATTCATACGGGTGAAAAACCATTCGCGTGTACGTACTGCGATTTTAGATGCAACCGCTCGTATTCATTGATTACGCACATACGGGGACACACGGGTGAAAAACCGTTTGCGTGTAAGCTGTGTGCGTACAAGTGTACACGCACCAGTCAGTTGATAAGGCATATGCAAACTCATACAGGCGAAAAGCGTTTTTCATGTAAGTTGTGTGATTATAAATGCACCCGGCATTGCAATTTGCAGATGCATATGCGTGTTCACACGGGTGATATGCTGTCATGTGATTATTGCACGTATAAGACTGCGAACAAAGCCTGCCTTGTGGTCCACATTAAAAGGCATGTGAAACTCAGAGCAGAGATTGAGGTTAACGCGGACCGCCGACTTTAA
Protein Sequence: MSTIPSVVQVCIICLDTESRLHVMSKYKLRKAYENLTGHSIAENECKAKFLCSECIHRLMNFTNFRYKSLRARSILEYLVRKYEYVTIDHIKLVDRNKYHLRSDIVKTVFEPGHCDLYIDCSDTDILTELGATVDTLALKQEERHGYVLVDGDHSLHMIIKNKDDVDIQTDLKTAFGNTIVKTEHNYYEDHLDIKSERLNEYDDCIDNTNFYVPNDGYISDSASTFILEPKPILEELLDKTPTCTENTHNLGMAPDPTITRSNRHAMEQNNYKTETDTKLDTESTKKKKKLQDKLEFETMKNLTLYNESSNFWETDKEEKNLLVKRETKKDIVNPYSCTICNYKCKLNISLTVHMRKHKDEKYFTCEFCDYKFKLRHSLNLHMQKHRNAGVNCGLCNSKFDNNDNLYRHMKIHFGENSFACNLCEYENEDNVSFVQHMRTHSGDKESFSCQICDYEFMGKDLLKKHMYLTHEKGSGGDVETQKSVLKTPNQSDKTHACEQCNSKFVSKGNLMRHIKIYCGEKVFTCHFCERKFKAKCDLKRHMLRHTTKKTYPCEYCDHKFSCKSHLKEHAWIHTQNPSNTGVETQKSVVETVNEKYVCEICDSKFVLKNHLTRHMKTHFIEKRYTCQVCNHKFSSKSHLKEHAWIHTQNPSNTGVETQKSVIETLNERYVCEICDSKFVLKNHLTRHIKTHFIEKRYTCQVCNHKFSSKSHLKEHAWIHTQNPSNTGVETQKSVIETVNEKYVCEICDSKFVLKNHLTRHMKTHFIEKRYTCQLCDHKFSSKSHLKEHMCTTHEKNSIIDLETQNFDSESSSEGKKYACELCDSKFALKSHLTRHMRTHSGKKAFKCHVCQKKFSQNSSLKKHMLIHTGHKPYSCETCPYKCTSGIDLVNHQRIHTGEKPFACTYCDFRCNRSYSLITHIRGHTGEKPFACKLCAYKCTRTSQLIRHMQTHTGEKRFSCKLCDYKCTRHCNLQMHMRVHTGDMLSCDYCTYKTANKACLVVHIKRHVKLRAEIEVNADRRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -