Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995231.1:8048291-8057771[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.1e-05 0.00096 19.8 1.5 2 23 452 473 451 473 0.96

2 18 1e-05 0.00046 20.8 6.1 1 23 479 501 479 501 0.99

3 18 0.13 5.9 7.9 0.1 8 23 509 524 508 524 0.86

4 18 2.9e-05 0.0013 19.4 2.4 2 23 531 552 530 552 0.97

5 18 0.00025 0.012 16.4 2.2 1 23 558 580 558 580 0.98

6 18 2.7e-05 0.0012 19.5 0.8 1 23 586 608 586 608 0.98

7 18 2.9e-05 0.0013 19.4 2.4 2 23 615 636 614 636 0.97

8 18 0.00025 0.012 16.4 2.2 1 23 642 664 642 664 0.98

9 18 2.7e-05 0.0012 19.5 0.8 1 23 670 692 670 692 0.98

10 18 1.5e-05 0.00069 20.3 2.9 2 23 699 720 698 720 0.97

11 18 3.3e-05 0.0015 19.2 2.2 1 23 726 748 726 748 0.98

12 18 1.3e-05 0.00061 20.5 1.1 1 23 754 776 754 776 0.98

13 18 0.00016 0.0072 17.1 2.6 3 23 784 804 783 804 0.99

14 18 0.00018 0.0081 16.9 1.6 1 23 810 832 810 832 0.98

15 18 9.3e-05 0.0043 17.8 2.6 1 23 838 860 838 860 0.98

16 18 0.00059 0.027 15.3 4.0 1 23 866 888 866 888 0.98

17 18 1.5e-06 7e-05 23.4 2.5 1 23 894 916 894 916 0.98

18 18 0.00016 0.0073 17.1 4.5 1 23 922 944 922 944 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.1e-05	0.00096	19.8	1.5	2	23	452	473	451	473	0.96
2	18	1e-05	0.00046	20.8	6.1	1	23	479	501	479	501	0.99
3	18	0.13	5.9	7.9	0.1	8	23	509	524	508	524	0.86
4	18	2.9e-05	0.0013	19.4	2.4	2	23	531	552	530	552	0.97
5	18	0.00025	0.012	16.4	2.2	1	23	558	580	558	580	0.98
6	18	2.7e-05	0.0012	19.5	0.8	1	23	586	608	586	608	0.98
7	18	2.9e-05	0.0013	19.4	2.4	2	23	615	636	614	636	0.97
8	18	0.00025	0.012	16.4	2.2	1	23	642	664	642	664	0.98
9	18	2.7e-05	0.0012	19.5	0.8	1	23	670	692	670	692	0.98
10	18	1.5e-05	0.00069	20.3	2.9	2	23	699	720	698	720	0.97
11	18	3.3e-05	0.0015	19.2	2.2	1	23	726	748	726	748	0.98
12	18	1.3e-05	0.00061	20.5	1.1	1	23	754	776	754	776	0.98
13	18	0.00016	0.0072	17.1	2.6	3	23	784	804	783	804	0.99
14	18	0.00018	0.0081	16.9	1.6	1	23	810	832	810	832	0.98
15	18	9.3e-05	0.0043	17.8	2.6	1	23	838	860	838	860	0.98
16	18	0.00059	0.027	15.3	4.0	1	23	866	888	866	888	0.98
17	18	1.5e-06	7e-05	23.4	2.5	1	23	894	916	894	916	0.98
18	18	0.00016	0.0073	17.1	4.5	1	23	922	944	922	944	0.98

Sequence Information

Coding Sequence: ATGCGGTGCTGTGTGCCTTTCTGCAAAAATACTTCGGACAATGTATCAGAGGGAGCAGGGAAGGGGATTAGTTTTCATGGTTTCCCCAATGAAGTGCATCTCCGTGAAGCTTGGCTCAGAGCCCTCGGCAAACAAGACAATCTACCAGACTCTGCTTTGGTCTGCTCACAGCATTTTCTTCATGATGACATTTATGAAACAGAAAGTGGCTTACGGCGAATTGTTACTGGTGCTATTCCTTCAATGGTGCAGGTTTGCATGATATGTCTAGACACTGACAGCAAGCTGTTTCTAATGAATAAACATAAATTAGACGAAGCATATGAAAAATTAACCCGATATCCTCTGTGTGATCAAGGAAACCTAAAACAGGCACTTTGTGTACAATGTGCTCAGAGATTGAGAAACTTTAGTAGATTTAGAGATCAAAGTCTGAAAGCTCGTGCACTGATGATGGACTTAATTGAAAAACATGAATTAATAACAAAACGACATATCAAAATGATAAACCGCACCAAACACCAACTAAAGATTAATATGGTGTTGACAACGCTAGGACCTGACCACTGCGACTTACACATACTAGAACACCCCTTAGAAGACAAACAAATTGAATTACAAGAAACAGACCACCAAGTTCTAGTAAAAACTGAAGGAAGCGATGACTCTATGTCGGTTGATGAGGACATTGATGTAAATGAAGATGACAATAATGCCATAGATGAGTTTGTGACTTCTAATGATGAAAACATATCCGACTACAGCATTATGGTGGAAACAAGAGCAATGGATGAAGCACTTTACAAAGCTCTCAAGATGAAAAATATGAGTGCAAATCTCGAGAACAATGGCTGTGATGCTGAATGTAACACCGTCCATGTATGCAAGCCTCGTACAGCTGTGAGCTCTAGCTCTGCACACTCTTCACTCATCACTGAAAACGAGCAAGGAGGCCCCAACCCTTCGGCACAGTCTCCTCAGACCTCAGTTGTTCCCGTGGCCGCGAGTCTAGCGACAAGAAACAAAATAAAAGTGCATCCAACTGAAGAAGCTGATACATCCATCAACAAATTAACAGATTGTGTTGTCAAATTATATGACATTTTCTCTAAGAAAGTTGTACCAAGACGAGATGAAAAAGCTGTAAGGTCCTGTGAAAGTCAAAACATTACATCTAAAGATACCCGTTATCAGGCAACAAGCCTGGATGAAGTCTCTACAACAGAATATGTTGAACCAGTCGCTGAAGCAGTTCCTGTAACTGTAACGGAAACTGTACAAAGTAAAACTGATTGTTTGAAGAATGTACAATTTGCATTACAAAATAGTTCAAACACTGGGGTAAGAAATTGCATTTGTGATATTTGTCAAAAAATATATACACGAAAAGGTCTCTTAGTTAAACACATAAAGACTCATGGTGAAGTAAGACGGTTCACTTGCAAAATTTGCCAGTACAAGTGTAAATATCAAAGTGCCTTGAAGAGGCATATGCGAACTCATGCTAGTGAAAACCCGTTCGATTACAAATGTTCTCTAAGTGGTAATTTAGTGAGGCACATGAGAACCCACACTGGAATAAAACCTGTCTCGTGTAAGTTATGCGATTATAAATGTTCTCGAAATAGCGATTTAGTGTTGCACATGAGAACCCATACTGGTATTAAGCCTTTCTCGTGTGAGTTATGCGATTATAAATGTTCTCTAAGAGGTAATTTAGTGAGGCACATGAGTACCCATACTGGGATAAAACCTTTCTCGTGTGAGTTATGCGATTATAAATGTACAACAAATGGTGCACTAGTGGCGCACATAAGAACCCATACTGGAATAAAACCTGTCTCGTGTAAGTTATGCGATTATAAATGTTCTCGAAATAGCGATTTAGTGTTGCACATGAGAACCCATACTGGTATTAAGCCTTTCTCGTGTGAGTTATGCGATTATAAATGTTCTCTAAGAGGTAATTTAGTGAGGCACATGAGTACCCATACTGGGATAAAACCTTTCTCGTGTGAGTTATGCGATTATAAATGTACAACAAATGGTGCACTAGTGGCGCACATAAGAACCCATACTGGAATAAAACCTGTCTCGTGTAAGTTATGCGATTATAAATGTTCTCGAAATAGCAATTTAGTGTTGCACATGAGAACCCATACTGGTATTAAGCCTTTCTCGTGTGAGTTATGCGATTATAAATGTTCTCTAAGTGGTAATTTAGTGAGGCACATGAGAACCCATACTGGGATAAAACCTTTCTCGTGTGAGTTATGCGATTATAAATGTACAACAAATGGTGCACTAGTGGCGCACATGAGAACCCATACTGGAATAAAACCTGTCTTGTGTAAGTTATGCGATTATAAATGTTCTCAAAATAGCTATTTAGTGAGGCACATGATAACCCATACTGGGATAAAACCTTTCTCGTGTGAGTTATGCGATTATAAATGTTCTCTAAGAGGTAATTTAGTGAGGCACATGATAACCCATACTGGGATAAAACCTTTCTCGTGTGAGTTATGCGATTATAAATGTTCTCGAAATGAAAGTTTAGTGTCGCACTTGAGAACCCACACTGGTTTAAAGCCTTTCTCGTGTGAGTTATGCGATTATAAATGTTCTCATAGTGGTAGTTTAGTGACGCACATGAGTACCCATACTGGTATTAAGCCTTTCTCGTGTGAGTTATGCGATTATAAATGTTCTCGAAATAGCAATTTAGTGGCGCACATGAGAACCCATACTGGTATTAAGCCTTTCTCGTGTGAGTTATGCAATCACAAATGTACAACAAAAAGTGGATTAGTGGTGCACATGAGAACCCACACTGGTGTAAAACCTTACTCGTGGGAAAGCAGGTGGGATTCGTACAGAGGGAGCATTCGTACAGCAGTCATATCTCCACTACAGTACATGGTGAGTGGTGACGCGTTTGTGTTTATGTACATGTGA
Protein Sequence: MRCCVPFCKNTSDNVSEGAGKGISFHGFPNEVHLREAWLRALGKQDNLPDSALVCSQHFLHDDIYETESGLRRIVTGAIPSMVQVCMICLDTDSKLFLMNKHKLDEAYEKLTRYPLCDQGNLKQALCVQCAQRLRNFSRFRDQSLKARALMMDLIEKHELITKRHIKMINRTKHQLKINMVLTTLGPDHCDLHILEHPLEDKQIELQETDHQVLVKTEGSDDSMSVDEDIDVNEDDNNAIDEFVTSNDENISDYSIMVETRAMDEALYKALKMKNMSANLENNGCDAECNTVHVCKPRTAVSSSSAHSSLITENEQGGPNPSAQSPQTSVVPVAASLATRNKIKVHPTEEADTSINKLTDCVVKLYDIFSKKVVPRRDEKAVRSCESQNITSKDTRYQATSLDEVSTTEYVEPVAEAVPVTVTETVQSKTDCLKNVQFALQNSSNTGVRNCICDICQKIYTRKGLLVKHIKTHGEVRRFTCKICQYKCKYQSALKRHMRTHASENPFDYKCSLSGNLVRHMRTHTGIKPVSCKLCDYKCSRNSDLVLHMRTHTGIKPFSCELCDYKCSLRGNLVRHMSTHTGIKPFSCELCDYKCTTNGALVAHIRTHTGIKPVSCKLCDYKCSRNSDLVLHMRTHTGIKPFSCELCDYKCSLRGNLVRHMSTHTGIKPFSCELCDYKCTTNGALVAHIRTHTGIKPVSCKLCDYKCSRNSNLVLHMRTHTGIKPFSCELCDYKCSLSGNLVRHMRTHTGIKPFSCELCDYKCTTNGALVAHMRTHTGIKPVLCKLCDYKCSQNSYLVRHMITHTGIKPFSCELCDYKCSLRGNLVRHMITHTGIKPFSCELCDYKCSRNESLVSHLRTHTGLKPFSCELCDYKCSHSGSLVTHMSTHTGIKPFSCELCDYKCSRNSNLVAHMRTHTGIKPFSCELCNHKCTTKSGLVVHMRTHTGVKPYSWESRWDSYRGSIRTAVISPLQYMVSGDAFVFMYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954579;
90% Identity: iTF_00954579;
80% Identity: iTF_00954579;