Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995236.1:1292698-1306826[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 7.5e-05 0.0035 18.1 2.6 2 23 177 198 176 198 0.97

2 22 6.5e-05 0.003 18.3 4.1 1 23 204 226 204 226 0.98

3 22 0.0018 0.081 13.8 3.0 1 23 232 254 232 254 0.97

4 22 4.5e-05 0.0021 18.8 3.8 1 23 278 300 278 300 0.97

5 22 0.0056 0.26 12.2 0.5 1 23 306 328 306 328 0.97

6 22 0.001 0.046 14.6 2.2 1 23 334 356 334 356 0.97

7 22 6.8e-06 0.00031 21.4 1.6 1 23 362 384 362 384 0.98

8 22 8.4e-06 0.00039 21.1 0.7 2 23 391 412 390 412 0.97

9 22 8.8 4.1e+02 2.1 2.2 2 18 442 458 441 463 0.86

10 22 0.00027 0.013 16.3 4.6 1 23 467 489 467 489 0.98

11 22 2.1e-05 0.00098 19.8 1.5 1 23 495 517 495 517 0.98

12 22 5.2e-05 0.0024 18.6 5.6 1 23 523 545 523 545 0.97

13 22 1.6e-05 0.00072 20.2 4.2 1 23 551 573 551 573 0.98

14 22 0.0063 0.29 12.0 3.5 1 23 596 618 596 618 0.98

15 22 1.1e-05 0.00049 20.8 2.5 1 23 624 646 624 646 0.99

16 22 0.00051 0.024 15.5 1.3 1 23 652 674 652 674 0.98

17 22 1.6e-05 0.00072 20.2 0.8 1 23 680 702 680 702 0.98

18 22 8.3e-05 0.0038 18.0 0.2 1 23 708 730 708 730 0.97

19 22 0.00014 0.0065 17.2 2.7 1 23 759 781 759 781 0.98

20 22 0.00025 0.011 16.5 3.1 1 23 787 809 787 809 0.97

21 22 1.3e-05 0.0006 20.5 5.7 1 23 815 837 815 837 0.99

22 22 4.5e-05 0.0021 18.8 2.3 1 23 843 865 843 865 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	7.5e-05	0.0035	18.1	2.6	2	23	177	198	176	198	0.97
2	22	6.5e-05	0.003	18.3	4.1	1	23	204	226	204	226	0.98
3	22	0.0018	0.081	13.8	3.0	1	23	232	254	232	254	0.97
4	22	4.5e-05	0.0021	18.8	3.8	1	23	278	300	278	300	0.97
5	22	0.0056	0.26	12.2	0.5	1	23	306	328	306	328	0.97
6	22	0.001	0.046	14.6	2.2	1	23	334	356	334	356	0.97
7	22	6.8e-06	0.00031	21.4	1.6	1	23	362	384	362	384	0.98
8	22	8.4e-06	0.00039	21.1	0.7	2	23	391	412	390	412	0.97
9	22	8.8	4.1e+02	2.1	2.2	2	18	442	458	441	463	0.86
10	22	0.00027	0.013	16.3	4.6	1	23	467	489	467	489	0.98
11	22	2.1e-05	0.00098	19.8	1.5	1	23	495	517	495	517	0.98
12	22	5.2e-05	0.0024	18.6	5.6	1	23	523	545	523	545	0.97
13	22	1.6e-05	0.00072	20.2	4.2	1	23	551	573	551	573	0.98
14	22	0.0063	0.29	12.0	3.5	1	23	596	618	596	618	0.98
15	22	1.1e-05	0.00049	20.8	2.5	1	23	624	646	624	646	0.99
16	22	0.00051	0.024	15.5	1.3	1	23	652	674	652	674	0.98
17	22	1.6e-05	0.00072	20.2	0.8	1	23	680	702	680	702	0.98
18	22	8.3e-05	0.0038	18.0	0.2	1	23	708	730	708	730	0.97
19	22	0.00014	0.0065	17.2	2.7	1	23	759	781	759	781	0.98
20	22	0.00025	0.011	16.5	3.1	1	23	787	809	787	809	0.97
21	22	1.3e-05	0.0006	20.5	5.7	1	23	815	837	815	837	0.99
22	22	4.5e-05	0.0021	18.8	2.3	1	23	843	865	843	865	0.98

Sequence Information

Coding Sequence: ATGGATGAACAACCCAGCAACTCTATACTTTATACTGGCGTCATAGTTCCCAAGGAAGAAAAATTAGAAAGCCTTATTGAACCTAAGAAGGAAATAACGGAAGAATTTTTAATACCTAAGGAGGAAATAATAGAACATGAACCAAACAAGGAAATATTAGGGCCTTTAATACCGAAGGAGGAAACAGCCCCTGTAATACCGAAAAAAGAAACAGAAGTTCTTATAGTTCCGAAGGAGGAAATAATACAAGTGGAGATAACCTTTGAAAATGACAATACTGACTATATTATACCCGAAGAACCATCCACATCTAAGCAACATGTAGAAAATTTGAATAAACAAAATGAAGCCAATTATCTGTTCACAGACGAAACGGAACCACCCTTTATTGATTTTACTATACGCAGACGACTTAGCAATCACGGGCAAATTATATCGGACACCGCTGCCTGTTCAACATATGGCTCCCCTTCGCCAACGCTATGGCAGACCCAATGCAGTAAAGCTGCAAAGAAAAAGGAACTCCTCTCTTGCGAAATTTGCGAGAAAAAATGTAAATACAAAAGTGCTTTAGACTCCCACATGCGGACGCACACTGGCGAAAAGCCTTTTTCTTGCAACCAATGCCCGGCTAAATTTTCACAAAAAAATCATTTAACTACACACACAAGGTCTCACACTGGAGAGAAGCCTTTCGCCTGCGAAATATGCCAGGCTAAATTTGCCAAAAAACATCATTTAACTCCACATATGAGGTCTCACACTGGCCCACCTCCGCCTAAGAAACGTAGGCAGGCTCGACGCGATAGATCTGCTACGAAACAAAAACTTCATTCTTGCCACGTCTGCGGAAAACAATATCAATACAAAAGTGCTTTAGATAGACACATGAGGGTGCACACTGGCGAAAAACCATTTTCCTGCGACCTATGCCCTGCTAAGTTCGCCCAAAAAAACCACGTAGTCTCCCATTTAATCTCTCACACTGGTGAAAAACCGTTCATTTGCCAAACATGTCAGGCTAAATTTGCAACAAAACAGCATTTAATCATTCACACGAGAAATCACACTGGTGAGAAACCCTTCATTTGCGACCAGTGTCAGGCGAAATTTTCACGAAAAACCAATTTGGTCACGCACATGAAGACACACACTGGTGAGAAACTTCAGTCATGTGAGATATGTCAGGCTAAATTCACACAACAAAAAACCCTGACTGCTCATATGAGGATACACATACGTGAGAAACCTTATGATCAGGATAATACACAAAAATGTACTTTAAATACTAACATGAGATATCACACTGGTGAAAATTCTTGTTCTTGCGATCAATGTCAGGCGCAATTTGCTCAAAAATGTTCTCTTAATGCTCTTATGAGGACTCACACTAGCGATTATTCTTGCGAATTTTGTCAAAAGAGTTTCACACAAAAATGTGATTTAGATATTCATACCAAGACTCACACTGGTGAAAAACCGTACAGCTGTGAAATATGCGAGGCCAAATTTTCGAGGAGAGACAAATTTTTCACTCATATGAGGGTACACACTGGTGAAAAACCTTTTGCGTGTAAAATATGTGACGCTAAATTCTGTAGAAAAGACCATTTCACTACTCACATGAAAATTCACAGTGGAGTGAAACCTTTTGCATGCAACACATGTGAAGCAAAATTTTCAAGAAAAGACCATTTCACAACGCATATGAGAACTCATACTGGCTCTCTCCCAGTGACAGGTAGGCAGAGCCACCGCGGTAGAGCTGCTAAGCAACAAAGTCTTCACACTTGCCATGTTTGCGCAAAACAATGGAAGTACAAAAGTGCTCTAGCCACGCACATGAGGACTCACACTGGTGAAAAACCATATTCCTGTGAACTATGCCAGGCTAGATTTGTACAGAAATATCACTTGATCAACCACATGAAAACCCACAGTGGCCTGAAACCTTACATTTGCGACATATGCCAAGCCAACTTCGCATCCAAACATCACCTTATTCCTCACATACGAACGCACACAGGTGACAAACCTTTTCCTTGCGACCTTTGCCAAGCTAAATTCACAAGAAAAAGCACTTTAGTTACCCACGTGAGAACCCACACAGGTGAAAAACCGTTTGCCTGTGAGCTATGCCCGGCTAAGTTTACCCAAACAAGCACCTTAGCTTCACATATGAAGATTCACATTCGCGACAATTCTCTAACTTTTAATCCACGTCTAGCTAAATTCGCAAAAAAAAATACTTCAATAAACACTGGTAAAAAACATTTCTCCTGTGGTCTGTGTGAGGCGAAATTTGTGCAAAAGTGTTCCTTAACCACTCACATGAGAACTCACACGGGTGAAAAACCGTTCGCCTGTGAAATTTGTCAGGCGAGGTTCTCCCAAAAATGCACTTTGAATAAGCATAAGAGAATTCACACTGGTGAAAAACCTTATCCTTGCGAGCTTTGTCATAGAAAATTCGCACAAAAGTGTAATTTGAAAATGCATATGAGGACTCACACTGGTGAAAAACCATATTTTTGTGCGATGTGCGACGCTAAATTTACAAGAAAAGAACATGTGATTACACATATGAGGACTCACGCTGACAAGCACAGCACGCGCGCCAGCAAACGCCATCACAGACGAAGTCCTGACGTGAGGTGCAAACTTAGCTTGAAATTATTGTGGTCTAACCCCCCGTCCACACACTGCCCGTGTGGCATGGGAAGCAGCGAGGAACGGAAGCAGAGACGTAGTGTGGCCGCGTTACTCGCGTGTTCCTCGTTCACGCCCATCGCTCCCTATTTTGCCGGTAAGTATGCAATAGCGCGCACGCTGCCACAGTTTCCACGTCCATCGCGTTGCAAAGACAAGCGACCTTGTGCGGCGTCGCGTCGTCGCGATTAA
Protein Sequence: MDEQPSNSILYTGVIVPKEEKLESLIEPKKEITEEFLIPKEEIIEHEPNKEILGPLIPKEETAPVIPKKETEVLIVPKEEIIQVEITFENDNTDYIIPEEPSTSKQHVENLNKQNEANYLFTDETEPPFIDFTIRRRLSNHGQIISDTAACSTYGSPSPTLWQTQCSKAAKKKELLSCEICEKKCKYKSALDSHMRTHTGEKPFSCNQCPAKFSQKNHLTTHTRSHTGEKPFACEICQAKFAKKHHLTPHMRSHTGPPPPKKRRQARRDRSATKQKLHSCHVCGKQYQYKSALDRHMRVHTGEKPFSCDLCPAKFAQKNHVVSHLISHTGEKPFICQTCQAKFATKQHLIIHTRNHTGEKPFICDQCQAKFSRKTNLVTHMKTHTGEKLQSCEICQAKFTQQKTLTAHMRIHIREKPYDQDNTQKCTLNTNMRYHTGENSCSCDQCQAQFAQKCSLNALMRTHTSDYSCEFCQKSFTQKCDLDIHTKTHTGEKPYSCEICEAKFSRRDKFFTHMRVHTGEKPFACKICDAKFCRKDHFTTHMKIHSGVKPFACNTCEAKFSRKDHFTTHMRTHTGSLPVTGRQSHRGRAAKQQSLHTCHVCAKQWKYKSALATHMRTHTGEKPYSCELCQARFVQKYHLINHMKTHSGLKPYICDICQANFASKHHLIPHIRTHTGDKPFPCDLCQAKFTRKSTLVTHVRTHTGEKPFACELCPAKFTQTSTLASHMKIHIRDNSLTFNPRLAKFAKKNTSINTGKKHFSCGLCEAKFVQKCSLTTHMRTHTGEKPFACEICQARFSQKCTLNKHKRIHTGEKPYPCELCHRKFAQKCNLKMHMRTHTGEKPYFCAMCDAKFTRKEHVITHMRTHADKHSTRASKRHHRRSPDVRCKLSLKLLWSNPPSTHCPCGMGSSEERKQRRSVAALLACSSFTPIAPYFAGKYAIARTLPQFPRPSRCKDKRPCAASRRRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -