Mjur007153.1
Basic Information
- Insect
- Maniola jurtina
- Gene Symbol
- -
- Assembly
- GCA_905333055.1
- Location
- HG995233.1:2027247-2043350[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.0072 0.33 11.9 1.3 3 23 220 241 207 241 0.92 2 28 2 92 4.2 0.2 3 23 264 285 262 285 0.94 3 28 0.00051 0.024 15.5 0.6 1 23 307 329 307 329 0.98 4 28 0.008 0.37 11.7 0.3 1 23 333 355 333 355 0.98 5 28 0.0029 0.13 13.1 0.2 1 23 360 383 360 383 0.94 6 28 0.0029 0.13 13.1 0.2 1 23 414 437 414 437 0.94 7 28 0.0029 0.13 13.1 0.2 1 23 468 491 468 491 0.94 8 28 0.0029 0.13 13.1 0.2 1 23 522 545 522 545 0.94 9 28 0.0029 0.13 13.1 0.2 1 23 576 599 576 599 0.94 10 28 0.0029 0.13 13.1 0.2 1 23 630 653 630 653 0.94 11 28 0.0029 0.13 13.1 0.2 1 23 684 707 684 707 0.94 12 28 0.0029 0.13 13.1 0.2 1 23 738 761 738 761 0.94 13 28 0.0029 0.13 13.1 0.2 1 23 792 815 792 815 0.94 14 28 0.0029 0.13 13.1 0.2 1 23 846 869 846 869 0.94 15 28 0.0029 0.13 13.1 0.2 1 23 900 923 900 923 0.94 16 28 0.0029 0.13 13.1 0.2 1 23 954 977 954 977 0.94 17 28 0.0029 0.13 13.1 0.2 1 23 1008 1031 1008 1031 0.94 18 28 0.0029 0.13 13.1 0.2 1 23 1062 1085 1062 1085 0.94 19 28 0.0029 0.13 13.1 0.2 1 23 1116 1139 1116 1139 0.94 20 28 0.0029 0.13 13.1 0.2 1 23 1170 1193 1170 1193 0.94 21 28 0.0029 0.13 13.1 0.2 1 23 1224 1247 1224 1247 0.94 22 28 0.0029 0.13 13.1 0.2 1 23 1278 1301 1278 1301 0.94 23 28 0.0029 0.13 13.1 0.2 1 23 1332 1355 1332 1355 0.94 24 28 9 4.2e+02 2.1 0.2 2 23 1394 1416 1393 1416 0.89 25 28 0.0003 0.014 16.2 1.2 1 23 1423 1446 1423 1446 0.97 26 28 0.15 6.7 7.8 3.2 1 23 1452 1474 1452 1474 0.93 27 28 2.6e-05 0.0012 19.6 1.1 1 23 1480 1502 1480 1502 0.99 28 28 4.5e-05 0.0021 18.8 3.7 1 23 1508 1531 1508 1531 0.98
Sequence Information
- Coding Sequence
- ATGAACGTAAAAAAAGGAAAAGGCCCGGTCTTCGACCCAGGTCTTTGCCGGTGTTGTGGTATGTTAAAAAAATGCCGTGTTTTGAATGTGGAATACGAGAGTTTGGGCCAGCTGGAAATCTATTCGGATATGATAATGGATTGTTATGGTCTCTTGCTTTCTCACTTGGATGGCAAGCTGTCTGAGAGGCTGGTGTGCGCCACGTGCGTGCAGCGCCTGCGCGACGCGCTCGCCTTCAAGCTGCAGGTGCTGCAGTGCGAGGCGGCCTTCCTGCAGGCGCGGCTGTGCGCTGACGGCCAAGAGACTGATGCAAAGGTAGAAGAAAGTGATTCAAAAATAGAAGTGGAAGTGAAAATGGAACCGGCGGAGGAGCCGGAACCGGACCGGGACGCGCTCGCGGAGCACGGGAGCTCATATGAGTCCTCCAACGAAGACGTACCTCTTCAAGTCCTGGTGTCAGAGAAGCCTCAAAGGAAACCCAGGGTGGATTTCAGTAGCATCCCAAAGCGAACTATTGAAAGGCCAAAGATACCGATGTCAAAATTGCAGCAGCGGATGCGGGAAAGAGACCCATCGTACATAACAGAGACAAACACACTCACCATAGTCGAGTTCTCGTACGTCTGCCCGTTCAAGTGCCGCCACAGCCATCTCCTGTGCTTCTACTGCGGAGAGAACTTCTCAGACCCTCAACTACTCAGAGACCACACCTTGGACTCTCACCATCCGAAGAAGTTCAAAGTTACGGGTCACAAAAACATGCTCAAAGTGGACCTGACTCGGATAGACTGCAGATTGTGTTCGGAAAAGATCGATTCCTTGGAGGATTTCAAGAAGCATATAACGAGTGTGCACAACAAGAAGTACTACTTCAGCAGCCGGGAGATGCTTCTGCCCTTTCGTCTGTCTCAACACGAGTACAAGTGCGCGCTGTGCGACGCCGCGTTCGCGTACTTCCACGCGCTGAACAAACATATGAACGAACACTATAGCAACTTCATGTGTGAGACGTGCGGCCTGGGCTTTGTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAACGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAACGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAACGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAACGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAACGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAACGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAACGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAACGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAGCGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGCGGCAAGGTGTTCCGCGCGCAGTACAACAGGGAGCTGCACGTCGACCGAGTCCACAGGAAGAGAGGTGAGCGCTCGCCGCTGAGCCCTAGGGCTCTGGACCGCGCCAGGTTCCTGATGCACCAGCAACGCCACGACCAGGGGGACTTCCCGTGCCGCGAGTGGCGCGTGTACTGCCCCAAGTGCGACGTGCGGCTCATGTCCTACCCGCAGAAATTGAAGCACCTGAAGGAAGTCCACGGCGAAGCGCCCATGGCTTTTCCCTGCAACATGTGCGATAAGGTTTGCGAGAGTAGACGGCAACTCACAATACACGGACGCAAAGCGCACCTCAAGGACTACAGGTACGAGTGCCAGTGCTGCGGGCAGAAGTTCTTCACGCGGTTCGCGCTCACCAACCACATGCCGACCCACACCGGGGAGAGGAACTACAAGTGCAAGGTCTGCGAGAAGACCTACCCTCGCCTCAAGACGCTGAAGGACCACGTGCGCATCCACACCAACGACCGCCGCTACCGCTGCCACGTGTGTGGACAGGCCTTCATACAGAACTGCAGTCTGAAGGGCCACATGAAGACTCAGCACCCCGAGTACAGCTAA
- Protein Sequence
- MNVKKGKGPVFDPGLCRCCGMLKKCRVLNVEYESLGQLEIYSDMIMDCYGLLLSHLDGKLSERLVCATCVQRLRDALAFKLQVLQCEAAFLQARLCADGQETDAKVEESDSKIEVEVKMEPAEEPEPDRDALAEHGSSYESSNEDVPLQVLVSEKPQRKPRVDFSSIPKRTIERPKIPMSKLQQRMRERDPSYITETNTLTIVEFSYVCPFKCRHSHLLCFYCGENFSDPQLLRDHTLDSHHPKKFKVTGHKNMLKVDLTRIDCRLCSEKIDSLEDFKKHITSVHNKKYYFSSREMLLPFRLSQHEYKCALCDAAFAYFHALNKHMNEHYSNFMCETCGLGFVDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCRECGKVFRAQYNRELHVDRVHRKRGERSPLSPRALDRARFLMHQQRHDQGDFPCREWRVYCPKCDVRLMSYPQKLKHLKEVHGEAPMAFPCNMCDKVCESRRQLTIHGRKAHLKDYRYECQCCGQKFFTRFALTNHMPTHTGERNYKCKVCEKTYPRLKTLKDHVRIHTNDRRYRCHVCGQAFIQNCSLKGHMKTQHPEYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -