Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995233.1:1531533-1548331[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.11 5.1 8.1 5.5 1 23 252 274 252 274 0.98

2 27 3.7e-06 0.00017 22.2 1.0 1 23 469 491 469 491 0.98

3 27 0.00097 0.045 14.6 6.8 1 23 497 520 497 520 0.98

4 27 0.0084 0.39 11.6 1.4 1 23 526 548 526 548 0.98

5 27 8e-05 0.0037 18.0 2.4 1 23 554 576 554 576 0.98

6 27 0.012 0.57 11.1 5.6 1 23 582 604 582 604 0.98

7 27 2.4e-05 0.0011 19.7 1.0 1 23 610 632 610 632 0.98

8 27 2.4e-05 0.0011 19.7 1.0 1 23 638 660 638 660 0.98

9 27 3.7e-06 0.00017 22.2 1.0 1 23 811 833 811 833 0.98

10 27 0.00097 0.045 14.6 6.8 1 23 839 862 839 862 0.98

11 27 0.005 0.23 12.4 2.1 1 23 868 890 868 890 0.98

12 27 8e-05 0.0037 18.0 2.4 1 23 896 918 896 918 0.98

13 27 0.00042 0.02 15.7 0.8 1 23 924 946 924 946 0.98

14 27 1.8e-05 0.00085 20.0 2.9 1 23 952 974 952 974 0.98

15 27 3.7e-06 0.00017 22.2 1.0 1 23 1125 1147 1125 1147 0.98

16 27 0.00097 0.045 14.6 6.8 1 23 1153 1176 1153 1176 0.98

17 27 0.005 0.23 12.4 2.1 1 23 1182 1204 1182 1204 0.98

18 27 0.00017 0.0078 17.0 1.5 1 23 1210 1232 1210 1232 0.98

19 27 2.2e-05 0.001 19.8 2.1 1 23 1238 1260 1238 1260 0.98

20 27 0.00042 0.02 15.7 0.8 1 23 1266 1288 1266 1288 0.98

21 27 3.3e-05 0.0015 19.2 1.9 1 23 1294 1316 1294 1316 0.98

22 27 0.00011 0.0053 17.5 1.6 1 23 1322 1344 1322 1344 0.98

23 27 0.00061 0.028 15.2 1.1 1 23 1350 1372 1350 1372 0.98

24 27 0.0022 0.1 13.5 1.0 1 23 1378 1400 1378 1400 0.98

25 27 0.0005 0.023 15.5 2.3 1 23 1406 1428 1406 1428 0.98

26 27 2.7e-05 0.0012 19.5 6.3 1 23 1434 1456 1434 1456 0.98

27 27 0.00011 0.0053 17.5 4.8 1 23 1462 1484 1462 1484 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.11	5.1	8.1	5.5	1	23	252	274	252	274	0.98
2	27	3.7e-06	0.00017	22.2	1.0	1	23	469	491	469	491	0.98
3	27	0.00097	0.045	14.6	6.8	1	23	497	520	497	520	0.98
4	27	0.0084	0.39	11.6	1.4	1	23	526	548	526	548	0.98
5	27	8e-05	0.0037	18.0	2.4	1	23	554	576	554	576	0.98
6	27	0.012	0.57	11.1	5.6	1	23	582	604	582	604	0.98
7	27	2.4e-05	0.0011	19.7	1.0	1	23	610	632	610	632	0.98
8	27	2.4e-05	0.0011	19.7	1.0	1	23	638	660	638	660	0.98
9	27	3.7e-06	0.00017	22.2	1.0	1	23	811	833	811	833	0.98
10	27	0.00097	0.045	14.6	6.8	1	23	839	862	839	862	0.98
11	27	0.005	0.23	12.4	2.1	1	23	868	890	868	890	0.98
12	27	8e-05	0.0037	18.0	2.4	1	23	896	918	896	918	0.98
13	27	0.00042	0.02	15.7	0.8	1	23	924	946	924	946	0.98
14	27	1.8e-05	0.00085	20.0	2.9	1	23	952	974	952	974	0.98
15	27	3.7e-06	0.00017	22.2	1.0	1	23	1125	1147	1125	1147	0.98
16	27	0.00097	0.045	14.6	6.8	1	23	1153	1176	1153	1176	0.98
17	27	0.005	0.23	12.4	2.1	1	23	1182	1204	1182	1204	0.98
18	27	0.00017	0.0078	17.0	1.5	1	23	1210	1232	1210	1232	0.98
19	27	2.2e-05	0.001	19.8	2.1	1	23	1238	1260	1238	1260	0.98
20	27	0.00042	0.02	15.7	0.8	1	23	1266	1288	1266	1288	0.98
21	27	3.3e-05	0.0015	19.2	1.9	1	23	1294	1316	1294	1316	0.98
22	27	0.00011	0.0053	17.5	1.6	1	23	1322	1344	1322	1344	0.98
23	27	0.00061	0.028	15.2	1.1	1	23	1350	1372	1350	1372	0.98
24	27	0.0022	0.1	13.5	1.0	1	23	1378	1400	1378	1400	0.98
25	27	0.0005	0.023	15.5	2.3	1	23	1406	1428	1406	1428	0.98
26	27	2.7e-05	0.0012	19.5	6.3	1	23	1434	1456	1434	1456	0.98
27	27	0.00011	0.0053	17.5	4.8	1	23	1462	1484	1462	1484	0.99

Sequence Information

Coding Sequence: ATGCGGTGTTTTGTGCCTTTTTGCAAGAATACTTCCGAAAATGTATCAGAAAGGGGGCAGAGGATTAGTTTTCATAGTTTCCCCAGTGAAGTGTATGCCCGTGGTGCTTGGCTCAGAGCCCTCGGCAAACAAGGCAGCCTCCTACCAGACTCGGCTGTGGTCTGCTCGCAGCATTTTGTTAATGATGACATTTATGAAACAGAAGGTGGCTCAAGGGTAATAGCCAATGGTGCTATTCCTTCAACAGTGCAGGTTTGCATGGTATGCCTAGACACTGACAGCAAGCTGTTTCTAATGAGTAAACACAAATTGCAAGAAGCTTATGAAAAGTTAACTGGACATCCTTTGTGTGAACTAGGAAACCTAAAACAAACAGTCTGTGTACAATGCGCTCAGAGATTGATAAATTTTAATAGATTTAGAGACAAGAGCTTGAGAGCCCGTGCACTGATGATGGATTTAGTTGAAAAACATGAATTAATCACAAGAGAACATATAAATAGGATAAACCGCAGACACAAACTAAAGAGTAATATAACGTTGACAACGCTAGGACCTGACCACTGTGACTTACACATACTAGAATACTCAGCAGAAAACAACCAGACAGACTCGGAGGAAACCGAACAGGAACTCCAAATTGACGTGAAAACTGAGAAAAGTGATGATTCTGTATCAATTGTCGACGACACAGAAGTGATACTATATGAAGATGATTTTGTTATGGATCCATTAAAGTATGAAGATTCTCCCTTCCACTGCACACTTTGTTCTGAGGAGTTTGCCCATGAACAAGCATTCATGCAACATATGTGCATGCATATCCAGAATGGTGACTGCGATGGGGATGACATATCACAAGAATGCAAGCCTGATACAGCCGCGGGTTCCAGCTCTTCAAACTCTTCACTCATCACTGAGAACAAGCCGGCAGACCCCAGTCTTTCCACAGACGCTGATCAGACCGAAGCTGAAGTCGCTGCCTTGTCGATGAGTGTTGCGACAAATGACGAGAACAAAGTTCACGCTACTGAAGAAGCCGATACAATCCTGAAAACTGAAAAAGTGTTTGAAATGAGCAATAGCGAATTAGAAAACCAATCATCTGAAAGCACTTGTAAAATTAATATGAACATCAATAGTTTCAAGAATTGTGTAGTCAAGTTATATGATATTTTCTCAAATCAGAAAGTTATTCCACATAAAACACGCAGGGCTGATATGGCTTGTGACAGTCAGAATATTGCGTCTAAAGATTCCAGTTATCAGGCAACAAATCAGAAGGAAGTCCTTACGACAGAATACATTGTACCAGTCACTAGTAGTACTAGTCTGAATGATGTCATTAATAGAGACCAATGTATTAATTCATCGCAAAATAGTTTGTGTACTGAGAAAAATTCGTTCACTTGTGATATTTGTCGGAAAAAGTTTATTAGAAAAAGTCTTTTAGTTAATCACATTAAGATCCACACTGAAGTAAGAAAGTTCACTTGCGAGATTTGCCAACACAAATATAAATATCAATGTTCTTTGACAAGGCACATGAGAGTTACTCACATGGGTATAAAGCCATTCTCGTGTTCGTTATGCAAGTACAAAAGTGCGGAAAATAGCCATCTAGTGGAGCACTTGAGAATTCACACTGGTATAAAACCATTCTCGTGTACGTTATGCGATTACAAATGTGCACAAAGTAGCAGTTTGATGGTGCACTTACGAACTCACACTGGCATAAAGCCATTCTCGTGTTCGTTATGCAAGTACAAAAGTGCGAGAAACTGCCATCTAGTGGAGCACATGAGAACTCACTCTGGTATAAAACCATTTTCTTGTACGTTATGCGATTACAAATCTGCAACAAATAGCCAGCTAGTGAACCACATGAGAACTCACTCTGGAATAAAACCATTTTCTTGTACGTTATGCGATTACAAATCTGCAACAAATAGCCAGCTAGTGAACCACATGAGAACTCACTCTGGTATAAAACCATTTTCCTTCGCTGCCTTGTCGATGAGTGTTGCGACAAATGACGAGAACAAAGTTCACGCTACTGAAGAAGCCGATACAATCCTGAAAACTGAAAAAGTGTTTAAAATTAGCAATAGTGAATTAGAAAACCAATCATCTGAAAGCACTTGTAAAAATAATGTGAACATCAATAGTTTCAAGAATTGTGTAGTCAAGTTATATGATATTTTCTCAAATCAGAAAGTTGTTCCACATAAAACACGCAAGGCTGATATGGCTTGTGACAGTCAGAATATTGCGTCTAAAGATTCCAGTTATCAGGCAACAAATCAGAAGGAAGTCCTTACGACAGAATACATTGTACCAGTCACTAGTAGTACTAGTCTGAATGATGTCATTAATAGAGACCAATGTATTAATTCATCGCAAAATAGTTTGTGTACTGAGAAAAATTCGTTCACTTGTGATATTTGTCGGAAAAAGTTTATTAGAAAAAGTCTCTTAGTTAATCACATTAAGATTCACACTGAAGTAAGAAAGTTCACTTGCGAGATTTGCCAACACAAATATAAATATCAATGTTCTTTGACAAGGCACATGAGAGTTACTCACATGGGTATAAAGCCATTCTCGTGTTCGTTATGCAAGTACAAAAGTGCGGAAAATAGCCATCTAGTGGAGCACTTGAGAACTCACACTGGTATAAAACCATTCTCGTGTACGTTATGCGATTACAAATGTGCACAAAGTAGCAGTTTGATGGTGCACTTACGAACTCACACTGGCATAAAGCCATTCTCGTGTTCGTTATGCAAGTACAAAAGTGCGACAAACGGCAATCTAGTGGAGCACATGAAAACTCACTCTGGTATAAAACCATTTTCTTGTACGTTATGCGATTACAAATCTGCAACAAGTAGCCATCTAGTGAGGCACATGAGAACTCACTCTGGTATAAAACCATTCTCATTCGCTGCCTTGTCGATGAGTGTTGCGACAAATGACGAGAACAAAGTTCACGCTACTGAAGAAGCCGATACAATCCTGAAAACTGAAAAAGTGTTTGAAATGAGCAATAGCGAATTAGAAAACCAATCATCTGAAAGCACTTGTAAAATTAATGTGAACATCAATAGTTTCAAGAATTGTGTAGTCAAGTTATATGATATTTTCTCAAATCAGAAAGTTGTTCCACATAAAACACGCAAGGCTGATATGGCTTGTGACAGTCAGAATATTGCGTCTAAAGATTCCAGTTATCAGGCAACAAATCAGAAGGAAGTCCTTACGACAGAATACATTGTACCAGTCACTAGTAGTACTAGTCTGAATGATGTCATTAATAAAGACCAATGTATTAATTCATCGCAAAATAGTTTGTGTACTGAGAAAAATTCGTTCACTTGTGATATTTGTCGGAAAAAGTTTATTAGAAAAAGTCTCTTAGTTAATCACATTAAGATTCACACTGAAGTAAGAAAGTTCACTTGCGAGATTTGCCAACACAAATATAAATATCAATGTTCTTTGACAAGGCACATGAGAGTTACTCACATGGGTATAAAGCCATTCTCGTGTTCGTTATGCAAGTACAAAAGTGCGGAAAATAGCCATCTAGTGGAGCACTTGAGAACTCACACTGGTATAAAACCATTCTCGTGTACGTTATGCGATTACAAATCTGCAACAAATAGCCGTCTAGTGAAGCACATGAGAACTCACTCTGGTATAAAGCCATTCTCATGTACGATATGCGATTACAAATGTGCACAAAGTAGCAGTTTGATGGTGCACTTACGAACTCACACTGGCATAAAGCCATTCTCGTGTTCGTTATGCAAGTACAAAAGTGCGACAAACGGCAATCTAGTGGAGCACATGAAAACTCACTCTGGTATAAAACCATTTTCTTGTGCGTTATGCGATTACAAATCTGCAACAAGTAGCCATCTAGTGAGGCACATGAGAACACACTCTGGTATAAAACCATTCTCATGTACGTTATGCGATTACAAATGTATACAAAGTGGCAGTTTAGTGATACACATGAGAACTCACACTGGCATTAAACCATTTTCGTGTTCGTTATGCAAGTACAAAAGTGCGACAAAAGGCTATCTAGTGGAGCACATGAGAACTCACACTGGCATTAAACCATTTTCGTGTTCGTTATGCAAGTACAAAAGTGCGACAAAAGGCCGTCTAGTGGTGCACATGAGAACTCACACTGGCATTAAACCATTTTCGTGTTCGTTATGCAAGTACAAAAGTGCGAGAAACGGCCATCTAGTGGAGCACATGAGAACTCACTCTGGTATAAAACCATTTTCTTGTACGTTATGCGATTACAAATGTTCGAGTAATAGCCATCTAGTGAGGCACATGAGAACTCACACTGGCGAAAGACCATATTCATGCAATTTATGTAATTATAAATGCACAAAAAATGATTATTTAGCTAAGCATATGAGAACTCACACTGGCGAGAAACCATCGTGTTCGTGA
Protein Sequence: MRCFVPFCKNTSENVSERGQRISFHSFPSEVYARGAWLRALGKQGSLLPDSAVVCSQHFVNDDIYETEGGSRVIANGAIPSTVQVCMVCLDTDSKLFLMSKHKLQEAYEKLTGHPLCELGNLKQTVCVQCAQRLINFNRFRDKSLRARALMMDLVEKHELITREHINRINRRHKLKSNITLTTLGPDHCDLHILEYSAENNQTDSEETEQELQIDVKTEKSDDSVSIVDDTEVILYEDDFVMDPLKYEDSPFHCTLCSEEFAHEQAFMQHMCMHIQNGDCDGDDISQECKPDTAAGSSSSNSSLITENKPADPSLSTDADQTEAEVAALSMSVATNDENKVHATEEADTILKTEKVFEMSNSELENQSSESTCKINMNINSFKNCVVKLYDIFSNQKVIPHKTRRADMACDSQNIASKDSSYQATNQKEVLTTEYIVPVTSSTSLNDVINRDQCINSSQNSLCTEKNSFTCDICRKKFIRKSLLVNHIKIHTEVRKFTCEICQHKYKYQCSLTRHMRVTHMGIKPFSCSLCKYKSAENSHLVEHLRIHTGIKPFSCTLCDYKCAQSSSLMVHLRTHTGIKPFSCSLCKYKSARNCHLVEHMRTHSGIKPFSCTLCDYKSATNSQLVNHMRTHSGIKPFSCTLCDYKSATNSQLVNHMRTHSGIKPFSFAALSMSVATNDENKVHATEEADTILKTEKVFKISNSELENQSSESTCKNNVNINSFKNCVVKLYDIFSNQKVVPHKTRKADMACDSQNIASKDSSYQATNQKEVLTTEYIVPVTSSTSLNDVINRDQCINSSQNSLCTEKNSFTCDICRKKFIRKSLLVNHIKIHTEVRKFTCEICQHKYKYQCSLTRHMRVTHMGIKPFSCSLCKYKSAENSHLVEHLRTHTGIKPFSCTLCDYKCAQSSSLMVHLRTHTGIKPFSCSLCKYKSATNGNLVEHMKTHSGIKPFSCTLCDYKSATSSHLVRHMRTHSGIKPFSFAALSMSVATNDENKVHATEEADTILKTEKVFEMSNSELENQSSESTCKINVNINSFKNCVVKLYDIFSNQKVVPHKTRKADMACDSQNIASKDSSYQATNQKEVLTTEYIVPVTSSTSLNDVINKDQCINSSQNSLCTEKNSFTCDICRKKFIRKSLLVNHIKIHTEVRKFTCEICQHKYKYQCSLTRHMRVTHMGIKPFSCSLCKYKSAENSHLVEHLRTHTGIKPFSCTLCDYKSATNSRLVKHMRTHSGIKPFSCTICDYKCAQSSSLMVHLRTHTGIKPFSCSLCKYKSATNGNLVEHMKTHSGIKPFSCALCDYKSATSSHLVRHMRTHSGIKPFSCTLCDYKCIQSGSLVIHMRTHTGIKPFSCSLCKYKSATKGYLVEHMRTHTGIKPFSCSLCKYKSATKGRLVVHMRTHTGIKPFSCSLCKYKSARNGHLVEHMRTHSGIKPFSCTLCDYKCSSNSHLVRHMRTHTGERPYSCNLCNYKCTKNDYLAKHMRTHTGEKPSCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -