Mjur007002.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola jurtina
Gene Symbol
-
Assembly
GCA_905333055.1
Location
HG995233.1:5895517-5898978[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 5.3e-05 0.0025 18.6 3.5 3 23 2 22 1 22 0.97
2 41 5.2e-05 0.0024 18.6 8.1 2 23 29 50 28 50 0.97
3 41 0.0002 0.0094 16.7 3.3 1 23 56 78 56 78 0.99
4 41 8.3e-06 0.00038 21.1 2.7 1 23 84 106 84 106 0.98
5 41 3.4e-06 0.00016 22.3 2.3 1 23 112 134 112 134 0.98
6 41 0.00029 0.013 16.2 3.9 1 23 140 162 140 162 0.96
7 41 2.8e-05 0.0013 19.5 3.2 1 23 168 190 168 190 0.99
8 41 0.0011 0.051 14.4 8.4 1 23 196 218 196 218 0.98
9 41 0.00011 0.0052 17.5 2.1 1 23 224 246 224 246 0.98
10 41 0.00029 0.013 16.2 3.9 1 23 252 274 252 274 0.96
11 41 2.8e-05 0.0013 19.5 3.2 1 23 280 302 280 302 0.99
12 41 0.0011 0.051 14.4 8.4 1 23 308 330 308 330 0.98
13 41 0.00011 0.0052 17.5 2.1 1 23 336 358 336 358 0.98
14 41 0.00029 0.013 16.2 3.9 1 23 364 386 364 386 0.96
15 41 3.4e-06 0.00016 22.3 2.3 1 23 392 414 392 414 0.98
16 41 0.00029 0.013 16.2 3.9 1 23 420 442 420 442 0.96
17 41 2.8e-05 0.0013 19.5 3.2 1 23 448 470 448 470 0.99
18 41 0.0011 0.051 14.4 8.4 1 23 476 498 476 498 0.98
19 41 0.00011 0.0052 17.5 2.1 1 23 504 526 504 526 0.98
20 41 0.00029 0.013 16.2 3.9 1 23 532 554 532 554 0.96
21 41 2.8e-05 0.0013 19.5 3.2 1 23 560 582 560 582 0.99
22 41 0.0011 0.051 14.4 8.4 1 23 588 610 588 610 0.98
23 41 1.6e-05 0.00075 20.2 1.3 1 23 616 638 616 638 0.98
24 41 0.00029 0.013 16.2 3.9 1 23 644 666 644 666 0.96
25 41 2.8e-05 0.0013 19.5 3.2 1 23 672 694 672 694 0.99
26 41 0.0011 0.051 14.4 8.4 1 23 700 722 700 722 0.98
27 41 0.00011 0.0052 17.5 2.1 1 23 728 750 728 750 0.98
28 41 0.00029 0.013 16.2 3.9 1 23 756 778 756 778 0.96
29 41 2.8e-05 0.0013 19.5 3.2 1 23 784 806 784 806 0.99
30 41 0.0011 0.051 14.4 8.4 1 23 812 834 812 834 0.98
31 41 0.00011 0.0052 17.5 2.1 1 23 840 862 840 862 0.98
32 41 0.00029 0.013 16.2 3.9 1 23 868 890 868 890 0.96
33 41 3.4e-06 0.00016 22.3 2.3 1 23 896 918 896 918 0.98
34 41 0.00029 0.013 16.2 3.9 1 23 924 946 924 946 0.96
35 41 2.8e-05 0.0013 19.5 3.2 1 23 952 974 952 974 0.99
36 41 0.0011 0.051 14.4 8.4 1 23 980 1002 980 1002 0.98
37 41 0.00011 0.0052 17.5 2.1 1 23 1008 1030 1008 1030 0.98
38 41 0.00029 0.013 16.2 3.9 1 23 1036 1058 1036 1058 0.96
39 41 2.8e-05 0.0013 19.5 3.2 1 23 1064 1086 1064 1086 0.99
40 41 0.0011 0.051 14.4 8.4 1 23 1092 1114 1092 1114 0.98
41 41 1.2e-06 5.6e-05 23.7 0.6 1 23 1120 1142 1120 1142 0.99

Sequence Information

Coding Sequence
ATGTGTGATATTTGTAGAAAAGTGTTTAGACGAAAATGTCTCTTAGTTAAACACATAAAGACTCACGCTGAAGTAAGATGGCTCACTTGCAAGATTTGCCAGTACAAATGTAAATATCAAAGTCATTTGAAGCGTCATATGAGAACCCACACTGGTGACAAGCCATACTCCTGCAAGATATGCGAGTACAAATGTGCAGATAGAAATAATCTAATGAATCATACGAGAACTCACACTGGTATAAAAAAATTCTCGTGTAAGTTATGCGATTACAAATGTGCGCAAAATGGCAATCTAGTGAGGCACATGAGAACCCACACAGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGTAGTAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAGTAGTCTAATGAAGCATATGAGAACTCACACTGGCATAAAACCTTTCTCATGCAAGTTATGCGATTACAAATGTGCACATAATTGCAATCTAGTGAGGCACATGAGAACTCACACTGGTGAAAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAATAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAGTAGTCTAATGAAGCATATGAGAACTCACACTGGCATAAAACCTTTCTCATGCAAGTTATGCGATTACAAATGTGCACATAATTGCAATCTAGTGAGGCACATGAGAACTCACACTGGTGAAAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAATAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGTAGTAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAGTAGTCTAATGAAGCATATGAGAACTCACACTGGCATAAAACCTTTCTCATGCAAGTTATGCGATTACAAATGTGCACATAATTGCAATCTAGTGAGGCACATGAGAACTCACACTGGTGAAAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAATAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAGTAGTCTAATGAAGCATATGAGAACTCACACTGGCATAAAACCTTTCTCATGCAAGTTATGCGATTACAAATGTGCACATAATTGCAATCTAGTGAGGCACATGAGAACTCACAATGGTGAAAAGCCATATTCATGTGAGACATGTGAGTACAAATTTTCAGAAAGAAATAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAGTAGTCTAATGAAGCATATGAGAACTCACACTGGCATAAAACCTTTCTCATGCAAGTTATGCGATTACAAATGTGCACATAATTGCAATCTAGTGAGGCACATGAGAACTCACACTGGTGAAAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAATAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAGTAGTCTAATGAAGCATATGAGAACTCACACTGGCATAAAACCTTTCTCATGCAAGTTATGCGATTACAAATGTGCACATAATTGCAATCTAGTGAGGCACATGAGAACTCACACTGGTGAAAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAATAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCACAAAGTAGTAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAGTAGTCTAATGAAGCATATGAGAACTCACACTGGCATAAAACCTTTCTCATGCAAGTTATGCGATTACAAATGTGCACATAATTGCAATCTAGTGAGGCACATGAGAACTCACACTGGTGAAAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAATAATCTAAGGGATCATATGAGAATACACTCTGGTATAAAACCTTTCTTGTGTAAGTTATGCAATTACAAATGTGCACGAAACAGCACTCTAGTGACGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGAGATATGCGAGTACAAGTGTTCAGAAAGAAGTAGTCTAATGAAGCATATGAGAACTCACACTGGCATAAAACCTTTCTCATGCAAGTTATGCGATTACAAATGTGCACATAATTGCAATCTAGTGAGGCACATGAGAACCCACACTGGTGAAAAGCCATATTCATGTGAGATATGTGAATACAAATTTTCACCAAGCAGTGGTCTAATGAAGCATATGAGAACTCACACTGCCGCTGGTGAAACGCCTTCATCAAGTTCGTGA
Protein Sequence
MCDICRKVFRRKCLLVKHIKTHAEVRWLTCKICQYKCKYQSHLKRHMRTHTGDKPYSCKICEYKCADRNNLMNHTRTHTGIKKFSCKLCDYKCAQNGNLVRHMRTHTGDKPYSCEICEYKCSQSSNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSERSSLMKHMRTHTGIKPFSCKLCDYKCAHNCNLVRHMRTHTGEKPYSCEICEYKCSERNNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSERSSLMKHMRTHTGIKPFSCKLCDYKCAHNCNLVRHMRTHTGEKPYSCEICEYKCSERNNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSQSSNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSERSSLMKHMRTHTGIKPFSCKLCDYKCAHNCNLVRHMRTHTGEKPYSCEICEYKCSERNNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSERSSLMKHMRTHTGIKPFSCKLCDYKCAHNCNLVRHMRTHNGEKPYSCETCEYKFSERNNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSERSSLMKHMRTHTGIKPFSCKLCDYKCAHNCNLVRHMRTHTGEKPYSCEICEYKCSERNNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSERSSLMKHMRTHTGIKPFSCKLCDYKCAHNCNLVRHMRTHTGEKPYSCEICEYKCSERNNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSQSSNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSERSSLMKHMRTHTGIKPFSCKLCDYKCAHNCNLVRHMRTHTGEKPYSCEICEYKCSERNNLRDHMRIHSGIKPFLCKLCNYKCARNSTLVTHMRTHTGDKPYSCEICEYKCSERSSLMKHMRTHTGIKPFSCKLCDYKCAHNCNLVRHMRTHTGEKPYSCEICEYKFSPSSGLMKHMRTHTAAGETPSSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-