Mjur000794.1
Basic Information
- Insect
- Maniola jurtina
- Gene Symbol
- -
- Assembly
- GCA_905333055.1
- Location
- HG995228.1:6571787-6577156[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.7e-10 2.8e-07 30.5 0.1 2 38 16 52 15 56 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGCACGTACAAACCCAAAACTGATAGAAAAAATATCAATGAAGAAAACATTGAAGACGCAATACGTGAAGTATTGTCAAAGACTTTATCTATACGCAAAGCAGCCGACAAATATAGCATCAAAACTGCGACCCTACAACATCGCATAGAAAAAGCCAGAAAATCATTTGAAGCTACTAGAATATTATCTACAAATGAAGCATCCTCTTCATTACAAGCAGAATCTTCTTTATCACAAGCAGGTCCATCTTCACCACAAATAGCACCATCTATGGAGATGGCACAAATAGCGTCATCTTCAGCACACACTACTACTGCAGCTTTATCATCACACACTGCTACAGCTACTTCATCAAACATCTATGGTTCCAAGTATACCGTTGCACAAGTTTTTTCAATCGAACAAGAAAAGGCATTGACTCAATATTTATTGAATTGCAGTAAAATGCACTATGGCCTTACATTGAGACAGCTTTTGACTTTGGCATACGAGTTCGCAGAATCCTCAGGGTGTAATTATCTAAAACCCTGGAAAAAAACAAATGCGCTGGAAAAGATTGGGCAGCTGGCTTCAGGAAGAGAAACCCAGAATTGA
- Protein Sequence
- MVRTYKPKTDRKNINEENIEDAIREVLSKTLSIRKAADKYSIKTATLQHRIEKARKSFEATRILSTNEASSSLQAESSLSQAGPSSPQIAPSMEMAQIASSSAHTTTAALSSHTATATSSNIYGSKYTVAQVFSIEQEKALTQYLLNCSKMHYGLTLRQLLTLAYEFAESSGCNYLKPWKKTNALEKIGQLASGRETQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418911; iTF_00826796; iTF_00826795; iTF_00826838;
- 90% Identity
- iTF_00373878;
- 80% Identity
- -