Mjur005038.1
Basic Information
- Insect
- Maniola jurtina
- Gene Symbol
- -
- Assembly
- GCA_905333055.1
- Location
- HG995224.1:8588039-8588776[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-13 9.8e-11 41.6 0.0 3 39 12 48 10 54 0.85
Sequence Information
- Coding Sequence
- ATGGAACCTATCGCTCGTGGAAGCTGGACATTGGAACAGTTAAAAAATGCCATGGACGCCGTTAAAGGAGGAGTGATGTCTCAACGTAAAGCGGCCACGACATATGGTATTCCTAGAAGAACTTTAGTAAATCATCTGAAATCTGGAAAAGTAGAAAAACAAATAGGGCGTCGCACAGTTTTGACCGCAGAACAAGAAAATGACCTAGCATTGAGAATCAAAAGACTTGCATCTATAGGTTTTCCTTTGACACCAAAAATCATACGACATCAAGCATTTATTTTTTGTGAAAAAAATAACATACCAAATTTTAACGAATCTCTAAAACGAGAATATCTACTTAATTTAGATCTACTTAATTTTTTATTGTTTAGAAAATGTGAAATGGTTTATTTGTTTTATTTTTGTAAAATTTTTCTTTTTTCGTTTTAG
- Protein Sequence
- MEPIARGSWTLEQLKNAMDAVKGGVMSQRKAATTYGIPRRTLVNHLKSGKVEKQIGRRTVLTAEQENDLALRIKRLASIGFPLTPKIIRHQAFIFCEKNNIPNFNESLKREYLLNLDLLNFLLFRKCEMVYLFYFCKIFLFSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -