Basic Information

Insect: Maniola jurtina
Gene Symbol: clz9
Assembly: GCA_905333055.1
Location: HG995236.1:6220344-6223137[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.9e-13 1.2e-10 41.2 0.2 2 42 15 55 14 57 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.9e-13	1.2e-10	41.2	0.2	2	42	15	55	14	57	0.92

Sequence Information

Coding Sequence: ATGGTGCGTCACTATAAGCGAAAAACTAATGATTCATATTCTCAAGAGTCACTCCAAAAAGCCGTAGAAATGGTCAAAACAAAAGAAATGAGCACATACAAGGCTGCTGCAATATTTGGCGTACCTCGATCAACTATACTAGCCCGAGTAAAGGGACATCGTGGTGCGAAATATGATCATCGTGGTAGACCAACTACATTCACGGCGTCTATTGAAAAAAACATAGCTGGAGTTCTACATACTATGGAGCAGTGTGGGTTTGGTTTGACAAAAAGAGAAGTTATTGGGCTAGTAGGCCAATATGTGACTCGGAACAACATCAGCACTACTTTTAAAAATAGTTTACCTGGAGATGACTGGTTTGTGGGGTTTACCAGAAGAAATAAGCTTTCCCTTAAAAAACTCCGAGCAGTCGAAATTGCTCGTAAAAAAGCTGCCAATCCATTTGAAATCCAAAAATTTTACGATTTGTTGGAAGAGACAATCGTGAAAATAGGAGTAGTACCAAGTCGAATATACAATCTCGACGAAACGAGTTTCAGTCTCGATCCATCAAAAAGTAAAATCGTAGGAGTACAGGGATATTCGTGCACAAGAACGACAAGTACACCTGGACGTGAAAATATCACCGTGCTATTGGGAGCTAATGCATGTGGTGAGAAAATTCCACCTTTAATTATATTTAAAGGAACCTATCTCTGGAATACTTGGTTATATGAAGATGAAAATAATACCACGTATGCAGCCACCCGTAAAGGTTGGATGGAAACGCCAGTTTTTGAAAGCTATTTTGATAACGTTATCATCCCGACACTATGTACGAAACAAGAGCCCTTGCTTATAATTTATGATGGCCACTCTACGCACTTGGACATAAATATTATTGAAAAAGCTGCAGCTAACAACATAACTATAATCAAGCTACCACCTCATACATCGCACATCTTACTACCACTCGATATCAGTACAATGAAATCTATGAAAGACCGATGGGACAAATATTTGGTGCAATGGCAAAGGAAGAATATTGGCAAAAAAATCCCTAAAAGCGAATTCTCACGTATTATGACCGAAGTGTGGAATGAACTAGAGCCTGACATTATAATTAACGGATTTCGTAAAGCAGGTGTATGGCCAATCGATCGCCACCAAGTTTCACAGGACAAATATGATCAATTAGTTTTGAAAAGATGGAAAAATCAGAAGAAATCAAATGAAAATACTAATGAACAAGTAAGCCTAGGTAAAAATAATGAAAAAGAAAAAACAAAAGAGGATTTAACATACCAGAAAGAAAGTATAATCTTGGAAAACAATAGTGAAGAAAGTAAAGAGAACTCAGATGATAAAGAAACAGAGGAGAAAAATGCAAATCATTGTGCAATTGTAAAGAATCCCGGAATTTACAAATTACAATTACCACAAAAAATTTCAAACGAAAACTGTTATACAGAAAAAGTTGAAATTTTAAAAGATGAAATAATAAGAACACCAAATTCACAAAATTCAATCACAATCGAGCCAACTCGTGCTATAGTCAACCAGTATAAACCCAATAAAATCGAAGAATCTACTATTAATACTACTGTTACTTTTGAAGAATTGGTGTTGCAAACTATTTCTCGAGGAGACCAAAACACACATATAAAAAAGAAAAGAATCGGGAGAGGTGCAGAAGTAATTACTCATAAAGAAGCTATTGCTAGAATAAAAAAGGAAAAAGAGACGAAACTTGCCAAATCCATGAATAAGAAAAAGAGAAACTCTAATACCACTGCCACTAGAAACATAAGAAAAAGGAGTACAAAAAACAAAGAAAATAAAAAATCCAAGAAAAAGACAAAGAAAATAAATAAGGATGAAACAAGTAATAGTGATATAGAAATGAGTATACATAGCGATTCGGATCTTTTGGATTTGCAATCTGATTTTGAAAATGAAGTGATTATAATGGAATGTATAGAAAACAAAGAACTCGAAGAAAACCAGATAGTGACAAATATGATAAGTCAAATAGATCTTGAGAAATTTGAAAGTAGCCAGGTTGGTTGCCAAACAAATAAGAAAATGATGGTTAATAATATTGATGACGAACAATATGTGAGAGGTCATAGCATTAAAGAAAACAATGCGGAAATTATGATAAATGTACAGTCCAAGGGAGTTTTAGGAGGTCAAGACATACAAGATGGGTATGATGAGGCTAACGGTGGTATATGTTTGGGTGAGATTAAGAAAAAACTTTCAGAAAGCAAGGATATGAAACAGGTTAAAGAAAACCCAAGAAACATTAAAGTGACCATGTTGTCAGAAAAGAAAGTAAAGTATTTTGTGGGAAAAATAATCTCTAAACTAGGAAACAAATATGAAGTATCCTTTTGTGTCCAACACGGAAAGAATGACAGCACGATATTTAGGAAACCAAAGAAAATGGATATTGATACCATAGATGAAGAGATGATTGTGAAACCAGTTCAATTAATAGCTTTGAATCAGCAAGAATCAGATTTTGCTTTCTTTGACGATGATGATTTGGTATATTTTGATTGTTAG
Protein Sequence: MVRHYKRKTNDSYSQESLQKAVEMVKTKEMSTYKAAAIFGVPRSTILARVKGHRGAKYDHRGRPTTFTASIEKNIAGVLHTMEQCGFGLTKREVIGLVGQYVTRNNISTTFKNSLPGDDWFVGFTRRNKLSLKKLRAVEIARKKAANPFEIQKFYDLLEETIVKIGVVPSRIYNLDETSFSLDPSKSKIVGVQGYSCTRTTSTPGRENITVLLGANACGEKIPPLIIFKGTYLWNTWLYEDENNTTYAATRKGWMETPVFESYFDNVIIPTLCTKQEPLLIIYDGHSTHLDINIIEKAAANNITIIKLPPHTSHILLPLDISTMKSMKDRWDKYLVQWQRKNIGKKIPKSEFSRIMTEVWNELEPDIIINGFRKAGVWPIDRHQVSQDKYDQLVLKRWKNQKKSNENTNEQVSLGKNNEKEKTKEDLTYQKESIILENNSEESKENSDDKETEEKNANHCAIVKNPGIYKLQLPQKISNENCYTEKVEILKDEIIRTPNSQNSITIEPTRAIVNQYKPNKIEESTINTTVTFEELVLQTISRGDQNTHIKKKRIGRGAEVITHKEAIARIKKEKETKLAKSMNKKKRNSNTTATRNIRKRSTKNKENKKSKKKTKKINKDETSNSDIEMSIHSDSDLLDLQSDFENEVIIMECIENKELEENQIVTNMISQIDLEKFESSQVGCQTNKKMMVNNIDDEQYVRGHSIKENNAEIMINVQSKGVLGGQDIQDGYDEANGGICLGEIKKKLSESKDMKQVKENPRNIKVTMLSEKKVKYFVGKIISKLGNKYEVSFCVQHGKNDSTIFRKPKKMDIDTIDEEMIVKPVQLIALNQQESDFAFFDDDDLVYFDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954343;
90% Identity: iTF_00954343;
80% Identity: -