Mjur001097.1
Basic Information
- Insect
- Maniola jurtina
- Gene Symbol
- -
- Assembly
- GCA_905333055.1
- Location
- HG995228.1:9965156-9965779[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-13 1.5e-10 41.0 0.1 5 39 19 53 18 57 0.89 2 2 0.37 1.2e+02 2.9 0.0 17 26 125 134 123 135 0.90
Sequence Information
- Coding Sequence
- ATGGTACGTACATACAAGAAAAAAACTAAAAGCGGAGAGTGGTCAACAATTTCTATGAAAACAGCTATAGATAAAGTATTAAGTAAAGAAATGGGCTACAGAAAAGCCGCTTCTGAATACGGAGTGCCTCAGACTACTTTGGAGCGATATGTTAAGAAAATGAAAGAAGCTGGTGAAGTTACAATTAGTGTACCTTTGGGCCATTCTTATCTAAAAAATTCGGAAGAACGTCTTTTTGGACTGACAACTCTCGATCTGAGACGTCTAGCATATCAACTGGCTGTGAGAAATGGTAAGGCGCACAATCTTAATACTGACAAGCAGATGGCAGGGGTTGATTGGCTCAAAGGTTTCTTAAGGCGTCATCCAGATTTATCCATTCGTAAAGCCCAAAGCTACTTCAGCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTAATAAGTTGAAGGGTGCACGTAACATCAGCACTGTTCCCGTCAGCACCAACTTGCAATACGCGACCTATACGCGTGCTTTCAAGGCCTACTTGCAACAGCAGGTATGTGCCGGGTAA
- Protein Sequence
- MVRTYKKKTKSGEWSTISMKTAIDKVLSKEMGYRKAASEYGVPQTTLERYVKKMKEAGEVTISVPLGHSYLKNSEERLFGLTTLDLRRLAYQLAVRNGKAHNLNTDKQMAGVDWLKGFLRRHPDLSIRKAQSYFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNKLKGARNISTVPVSTNLQYATYTRAFKAYLQQQVCAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -