Mhyp000693.1
Basic Information
- Insect
- Maniola hyperantus
- Gene Symbol
- -
- Assembly
- GCA_902806685.1
- Location
- NC:2625338-2638991[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 8.1 3.1e+02 1.7 2.1 1 20 185 204 185 208 0.67 2 11 0.29 11 6.2 0.2 1 23 307 330 307 330 0.95 3 11 3.8 1.4e+02 2.7 0.1 3 14 345 356 344 357 0.89 4 11 8.6 3.3e+02 1.6 0.8 1 23 1126 1149 1126 1149 0.89 5 11 2 76 3.6 0.3 2 23 1200 1220 1200 1220 0.94 6 11 0.0027 0.1 12.6 1.7 2 23 1309 1330 1308 1330 0.97 7 11 2.7e-07 1e-05 25.2 2.7 1 23 1336 1358 1336 1358 0.99 8 11 0.00096 0.037 14.0 0.5 2 23 1364 1385 1363 1385 0.96 9 11 0.00015 0.0058 16.6 0.3 2 21 1392 1411 1391 1412 0.93 10 11 2.2 85 3.5 0.5 1 20 1417 1436 1417 1436 0.88 11 11 0.0047 0.18 11.8 1.4 3 23 1449 1470 1448 1470 0.97
Sequence Information
- Coding Sequence
- ATGGAGGAAAATAGCAAGAAAAGGAGTCGAAAATCGAAGTTGGTGCCGCGGGCTTGCTCAGATTCCGATGATGAGAATATAGCAGTTATGCAGCAAGAAATTGAGGCTACATTGGTGCAAAtcaagaataagaacatattgaTGAAGTTGAGCAAACCGCCAGCACCCAAACCGCCGCAGCTCACCATCAAGGTGGAAGTCGAGGAGTTCAGTGAGACGCGTGAACCCGACACAGATCTAAATATACGAATTGATTCCGTGACAAGTCTCGCGCAACCGACCGCTCAACCCGTCCCTAGCACGAGCAAAGAGTCCGACCTCCCCTACTTGAGGATATCAAACGAAACACTTCGAATGGAATTCGAAAAGCTATCTCGCGAAACGACTAGCCCGGCTGACAAACGGATAGAAATAAACGTCAGAAATTTTATGGGAAAGAATAGAGTAGTCTCCCCATACACCTACATAGATGACAAATTGCAGTCTATATTACGGAAGAAATGGACGACCTGGCGCAACACGTTCAAGGATATCCGAGAATCACCCGTCTTGTACAAATGTGACAAATGCAACAAAGCCTGGTGGCATCTGTACCCCTTTAGGGAACATATGCTACACAGACATAAAAGCAACAAAAAGATGGTAATCCAGTTACAAACTTTCTGTCACGAATCCCACGTGATAGCGTACGATGGCATCGGACCGGAATTGAGAGCAGAGGGGTATCGTACAAAATCTAACTGTTGGAGATGCGGAGAAGGTGTGGCAGCGCATATGGATTTGAAATGTGACAAAAGTACTAGATACAGATGCGGGAGTTGTATGGAGAAATTTTATACGTGTACTCTACTGTTCGATCACAAGAGTGTGTGTCCATTGTACAGAAACTCCGCTTATATAAATGGGTTCGCTGAGAACTTTTCGTGCACTCTGTGCCCCATAAAGCTCGGCACGGAACTGCAGCTCTCGAATCATATGTTATTACGTCACAGCGTGAGGTCCGATCTTCCCACAGACTGGGTGCTCAAGGCTTGCACCGTTTGTGACTATGCTTACTCTACACAAACCTTGCACGACTGTCCATCCAAACCACCGGTAGCATCCTGCAAGTACTGCTTACAAAAGtttaacacacacatatatcATTCGATACATTTGACTTTCACGGAAGTAGAATTCCCGTGCAGGATATGCGGCGTGCTCCTCGAGAGACAGTGTATGGAGCTGCAGCATTTGATGGTGCACACCAATAACTATACAACATTATACAAATGTATTTATTGTACGGAACCAAAATATTTTCCTACTTTGTATTTGATtaacaaacataaattcagcatgCACAAGGCAAGGCAATCTGATACCAAGAACCTATTGGCTTGTTACGATATGgtagtgGTTCCAAAAAGGCTGGCTGTGAGTCTACCAGGTTTTATTCAAACAGAGCAGCAAAGGGAATTGGAACGTACAAGGTCGACAGAACAAAGCTTTGCCGATGTCTGCGACGGACACATCCTCGGTAAGAATGAAAAGAGACGCAAAAGTATTACAATCGTAGATCAGCCTCCTAAAAGGGCATCTgttgagaaaaaaaaatataaacattcaAGTGAAGAGGTAGTCATCGACATAACTCTGCCTGATGATAGCTCacaagatgatgatgaagaccATGACGTGGAAATAATTGAGAATCCACAAGAAAATGTTGTCATTGACATCACTGCATCTGATAGCGCTCAAGAAAATGAAGTCATCGTGAGCATGCCTGAGCGCCAACAGGATAATGGCACTaataaaatcatagaaaatcTCAATAATGGCATAAAAACTGAAAATTGCCaagaaaatgaaattgaagATATAAAAGTGCCTCTTTATAAAGAAGATAATGACGTTAGTATGAAATCACCTAATAATACAGTTGTCGGTAGTGATAATAGCCAAGAACGATGCAATAGACACACAATAGGTCATACGCAAGGAAATGACAATAATGATGATAACATACCTGATAATATACAAGAAAGATTCAATGTTGGCGTAGATATATCTGAAAACCTACAAGAGAGTGAAGACCCTAAAGAAATGTCTATAGATAACATCAATGATATCCCACCAACTGAAATCAATCAATTCGATCCCTATTTAGTGATTAAAGAAGAAATAATAGATTGTAATGTTAAAACACATTTGACTCAACAAGAACCCGAAAAAAATCATGAGATTAAAACCGAAAATAGTGTGCGCGTTAAAGAAGAACCtttagatatagttaaagaagAACCTTTAGACATAGTGCAAGAAGAACCTTTAGATATAGTTAGAGAAGGACCTGTAGATATAGTCCAAGAAGAAGCTGTTCTTATTGCAAACAGTAACAATACGAATAACATAAGTAATAACAAAACGCTAATAACACAAGCTGTTAATGATAAATTGGGAACTGACCTTGTTGACGCTAAATTGGTAATGAATGTTCCCAAATTAAGAAGTTGTCGTAAatcaaaaggtaaaattattaaAGGAGGAGCTAAAATTTGCTATAGGCAATTCCGaaatgtaattaataataaattgctAGCTAATATTGATAGCGAAATacttaaaaacaatattaattataatcaatTGAGAGCTGCTATTAGTAATAGTGACAAATCTaagactaataataataaaaataagctaAAAGCTGACATTGGCACATTGAGAGATGATGTTGAAAATGAcaaactgaaaaataataatgataaaatgaAGCCTAAAATTGTTAAATCGAGAAAACATGTTGAAAATAAAACACTGAAAACTGATAATGATAAATTGGAAGCTAATATtgataaattgaaaaatgacaATGAAAATGATAAATTGAAAACTAATAATGATAAAGTGGGAGCCACCAATGATGAATTGataaatgaaaaatttaaagaCGACAACATAAAGGATTTTGAAAGTAAAATTGATCAATTTGTCATACAAGTCAAACAAGAAGTTGATGCTACAGATATATGTAACAATTTCGAAGTCGCCGAAGAAGAATTAAATTTCAACATCAAACAAGAAAATCTGGATGAGTATATTGAAGATGATATGATAATATTGGATCCGAACAATACCGTTACCATGAACTATGAGATGGATCCTGCCGCTAGCACGTCGGTGACGTCAGAGGACGTGGAGATGCAGTCGCTGCTGACGCCAGAACTTGTATGCCATTCATACAAAaaAGTGTACAGATGTAGAAAATGCAACTTCCGGGGCCACCACCACGAATACAAGATTCATTTAGAACAGGAAGAACATTTCGCCAAGAAGAAGAAGCACGGCTGTCTGCGCAAGTACAGGGTAGCTGATGACAGGGGGAAGTACTTGTGCACCAAGTGTGACGGCTCATACCAGTCCATCTACAAGTACATCATACACTTCACCAAGGTGCACGACTACGCCCCGCAGACATGCCCCAAGTGCTTCCAGACCCTCCTCAGCATCCAGACCTTCCAATACCACGTGCAGACTCACATCAGAGAAAATTACGTCAACATATACCTCATCAAGACCAAGGAGCAGGACGAAGAGAAGAACATACGCCAGTGTAAGGTTTGCTCGGAGAAAGTCACCCCGGCTGACTTCTTCAAACATTGGGAGAACCATTTGGAAATATTGGATGTTTCGAAGAGGCCACAGGAGAACGAGGGATTCTCGCCCTCCATGGAACATAAGCATGAATTAAAACAAATGCTgtTGCTCCTACAAGGAAAACTTCAGCCAGGAGGCCCGGAGGACATGCAATACACCAAACTGCGGAACTGCATTAAATGTAAACGGAGATTTGACCGCAAGAACGAGTGCAAGCGACACTTCATCGAGCACCTTCTCCTGGACGCCTACCAGGAGCGACACAAGTATGGCTTTCTCAGGTGCCAAATATGCTCCCAGGACTTCCAGAACAGTGAGAGgtacAAACGACACATGCGCGAGCACGGCAGCCTGCCCATCTACAAGTGCGAGCTGTGCGACAAGTCGTTCAGCGACTCTAGCAACTTCACCAAGCACAAGAAGGTGCACAACCTCTCCGTGCTCATCTGCGACATTTGCAAGAAGAAGTTCACCGGCAAGCTCTTCCTCGAGAAGCATATCATGTTACATCAGCAGATGAAGCCGCTAGTGTGTCAGGAGTGCGACAAGGTGTTCTACACGGAGTCCAGCTACCGGAAGCACCTCAGCCGCGGCAAGGCGCTCTTCAAGTGCCCTTCATGCCACGTCTTCTTCCCCTCCGTACGAGAGAAGTGGGACCACATGTGGGATGAACACAAGGAGAGGAAGGTCCAAGCTGACTGTCCGTTATGCAAAAAACCGTACCGCAGGCTGCGAGACGTTCACAATCACTTACGCTCAGAGCACGGCGAGTCCCGCTACAGATACGTGGTGGACAAGCCCCCTCGCTCCAAGCGGAAGGCCAAAACGAGCGTCAACATGGACACCAAAACATGCATCAACTCGGACACCAAAACGGACGTCAAGGacaccaaaaccaaaaggaTCAGAtcaggaaaggatttttggacgGACTCCAAATCGTGTCCGTCCAAAAAGATCAAGACGAAAAAGATCACAGTCAAGGATGACGAAGTGGTTGTCGTGTACACGAAGAGAAATGTGAATGATCCCTCTCCGCCCGGACCCTAG
- Protein Sequence
- MEENSKKRSRKSKLVPRACSDSDDENIAVMQQEIEATLVQIKNKNILMKLSKPPAPKPPQLTIKVEVEEFSETREPDTDLNIRIDSVTSLAQPTAQPVPSTSKESDLPYLRISNETLRMEFEKLSRETTSPADKRIEINVRNFMGKNRVVSPYTYIDDKLQSILRKKWTTWRNTFKDIRESPVLYKCDKCNKAWWHLYPFREHMLHRHKSNKKMVIQLQTFCHESHVIAYDGIGPELRAEGYRTKSNCWRCGEGVAAHMDLKCDKSTRYRCGSCMEKFYTCTLLFDHKSVCPLYRNSAYINGFAENFSCTLCPIKLGTELQLSNHMLLRHSVRSDLPTDWVLKACTVCDYAYSTQTLHDCPSKPPVASCKYCLQKFNTHIYHSIHLTFTEVEFPCRICGVLLERQCMELQHLMVHTNNYTTLYKCIYCTEPKYFPTLYLINKHKFSMHKARQSDTKNLLACYDMVVVPKRLAVSLPGFIQTEQQRELERTRSTEQSFADVCDGHILGKNEKRRKSITIVDQPPKRASVEKKKYKHSSEEVVIDITLPDDSSQDDDEDHDVEIIENPQENVVIDITASDSAQENEVIVSMPERQQDNGTNKIIENLNNGIKTENCQENEIEDIKVPLYKEDNDVSMKSPNNTVVGSDNSQERCNRHTIGHTQGNDNNDDNIPDNIQERFNVGVDISENLQESEDPKEMSIDNINDIPPTEINQFDPYLVIKEEIIDCNVKTHLTQQEPEKNHEIKTENSVRVKEEPLDIVKEEPLDIVQEEPLDIVREGPVDIVQEEAVLIANSNNTNNISNNKTLITQAVNDKLGTDLVDAKLVMNVPKLRSCRKSKGKIIKGGAKICYRQFRNVINNKLLANIDSEILKNNINYNQLRAAISNSDKSKTNNNKNKLKADIGTLRDDVENDKLKNNNDKMKPKIVKSRKHVENKTLKTDNDKLEANIDKLKNDNENDKLKTNNDKVGATNDELINEKFKDDNIKDFESKIDQFVIQVKQEVDATDICNNFEVAEEELNFNIKQENLDEYIEDDMIILDPNNTVTMNYEMDPAASTSVTSEDVEMQSLLTPELVCHSYKKVYRCRKCNFRGHHHEYKIHLEQEEHFAKKKKHGCLRKYRVADDRGKYLCTKCDGSYQSIYKYIIHFTKVHDYAPQTCPKCFQTLLSIQTFQYHVQTHIRENYVNIYLIKTKEQDEEKNIRQCKVCSEKVTPADFFKHWENHLEILDVSKRPQENEGFSPSMEHKHELKQMLLLLQGKLQPGGPEDMQYTKLRNCIKCKRRFDRKNECKRHFIEHLLLDAYQERHKYGFLRCQICSQDFQNSERYKRHMREHGSLPIYKCELCDKSFSDSSNFTKHKKVHNLSVLICDICKKKFTGKLFLEKHIMLHQQMKPLVCQECDKVFYTESSYRKHLSRGKALFKCPSCHVFFPSVREKWDHMWDEHKERKVQADCPLCKKPYRRLRDVHNHLRSEHGESRYRYVVDKPPRSKRKAKTSVNMDTKTCINSDTKTDVKDTKTKRIRSGKDFWTDSKSCPSKKIKTKKITVKDDEVVVVYTKRNVNDPSPPGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -