Mhyp012062.1
Basic Information
- Insect
- Maniola hyperantus
- Gene Symbol
- zfy1
- Assembly
- GCA_902806685.1
- Location
- NC:4049006-4061665[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 4.9 1.9e+02 2.4 5.1 1 23 318 341 318 341 0.96 2 11 0.007 0.27 11.3 0.2 1 23 347 369 347 369 0.98 3 11 0.016 0.61 10.2 0.9 1 23 373 396 373 396 0.97 4 11 5 1.9e+02 2.3 4.7 1 14 403 416 403 425 0.84 5 11 9.6e-06 0.00037 20.3 0.5 2 23 430 452 429 452 0.93 6 11 7.1e-05 0.0027 17.6 1.2 1 23 458 480 458 480 0.97 7 11 0.0014 0.056 13.5 1.3 2 21 494 513 494 518 0.93 8 11 0.00037 0.014 15.3 2.4 1 23 526 549 526 549 0.94 9 11 6.5e-06 0.00025 20.9 0.9 1 23 554 577 554 577 0.98 10 11 5.5e-07 2.1e-05 24.2 2.4 3 23 586 606 585 606 0.98 11 11 2.9e-06 0.00011 21.9 2.6 1 23 612 635 612 635 0.96
Sequence Information
- Coding Sequence
- ATGGAAATAAAAGAAGACATTGTAAACAACTTGCTTTGCATGGCTTGTTTGTGTGTTGGAAGGGTAATAAGGAAAGTAGATGATGAGCAGCATAAGAAATTCTACCTGGACGCTTTGCAGGAACTACCTCTGAACAACATCAACATAGTTCCAAGGGTGTGCTGGGAGTGTGACGCCATCCTGAGCAAAGTGCTGTCGTTCAGGGAGCAAGTCAAAGACTGCTACAGGATCCTGCAGACTTACTCTGAGAATCTTCATGACTGCTCCTTGTTAGACTTATCCAGACCGCCGCGGTTGAAGGTGCACTTTAACAGTACAGTGGTCATCACACCAGGCGAAGAAGATTTTGTTAAACTTGAGAGTAAAGatAATGACAAAATAGAGAAATCTTCAGAAAATCCTAAAATTCATAGTTTAGAGAAAGGCCCAATAGAAGACATACAGACAGTATTATGTGATGTCAAAAGAGATAGAAGGAAAAAGAAGAATACTGTCAAAACTAGTTCAAAAGTGGCACGTCCAAAACGGACTGTGAAAAGGGACATAGACCCTGTAGCAGTGAGTGAAAATGACAAAATAAATGACAGTGGAAATGACGAAAAACACTTCATTGAAGTTGAAATTAACTTGAACGACCGAGTCAAAGTTGATGATGACGTCAAAACTGAGATAGACAATCATGATGGTCTAGAAGATAATGTATCAAATGAGGGTAGTCTGAAATCGATTGAGTCTTACGATGACGTAATGGGTGACATTGACACTAAAATACAAACATTTTTGGACGACATTAAGAAAAATAACGATAAATCTACGAAAgttaagaagaaaaagaaaatcaaaaataagGTGTCAAAATCTCAAAACATATTAACAGTGGATCTCTCCTACGACGAGATGCAAAGAGAGAGATCTCTCCTGTCCCGGAGAGAGAGTTATGTACAAGCGCAGTACAAGTGTGAGTCGTGTCTACTGGTCTTCAACTGCGCCACGTCTCTACGAACCCACCATTTGAAGAAACATAAGaTAGAGGGTGATTATATTTGCTCCATCTGTCAGACTATAGTATCATCTGTGGAAGCGTTCACTGCACATTACAAGAGGCATATGAGGAgATACGAATGTGCGATATGCCACAAGAGCTCGGCAGACATCAAATCGATCCAACAACATCTATACACGCGACACCAGATCTCTCTCAAGAAGTACAAGTGCAAATCTTGCGGGAAAGTGTCCAAATCATTAGATAAACACCGTTACCACTGCGACAAACATAAATCGCGCGTCCAGTGCCCGCAGTGTGACAAGACGTTTAGCCACCGCGCGGGACTAATGAACCATAGGCTGGCGGTCCACGAGTCGCAGAACCAGTTCCCTTGCACGCTCTGCGACAAAGTGTTCCGGTGGAAGACCAGCCTGAAGAGACATCTAGACAAACACAATACACAGGAAAATAATACAGTATCTACGAACAAAGCGTACTGCGAAGATTGTGATATCGGGTTTTCGTCTGTCTGTTCGTTGCAGAGACATCTCCGAAACAGCCTCAAACACGTCACTTACGACCAACTGAAaTTCATCTGTGCCCACTGCGGCCACCGTTTCGTGGACAAGACGAAACTACGCGATCATATAGAGGAAAAGCATTTGTATAGGACATTCCAGTGTAACATCTGTCATAAGCCGTCCAAAAACCGGGTAGGTTTGGAGCAACACATCCGCACGGTACACAAGGGGAGGCCTAACAACCGGATATGCCACCATTGCGGCAAAGGATTTCCGaCGAAGGTGCAGCTAGAGTCGCACATCCGCACGCACACCGGCGAAAGGCCGTTCATGTGTGAATACTGCCCTGTCACATTCTCGCAGCAGTCCAACTTGTACAAGCACCATAGACAAGTGCACCTAAACATGAAATCGAAACGTTACCCGTTGTGTAAGAAGAGTAAAGTCGACGGGAATCAAACCGGCGACCCTCAACCAACATTCCCGATAGCAATCATGCAATATGTTCCTGATAATACATTTACTTTCTGA
- Protein Sequence
- MEIKEDIVNNLLCMACLCVGRVIRKVDDEQHKKFYLDALQELPLNNINIVPRVCWECDAILSKVLSFREQVKDCYRILQTYSENLHDCSLLDLSRPPRLKVHFNSTVVITPGEEDFVKLESKDNDKIEKSSENPKIHSLEKGPIEDIQTVLCDVKRDRRKKKNTVKTSSKVARPKRTVKRDIDPVAVSENDKINDSGNDEKHFIEVEINLNDRVKVDDDVKTEIDNHDGLEDNVSNEGSLKSIESYDDVMGDIDTKIQTFLDDIKKNNDKSTKVKKKKKIKNKVSKSQNILTVDLSYDEMQRERSLLSRRESYVQAQYKCESCLLVFNCATSLRTHHLKKHKIEGDYICSICQTIVSSVEAFTAHYKRHMRRYECAICHKSSADIKSIQQHLYTRHQISLKKYKCKSCGKVSKSLDKHRYHCDKHKSRVQCPQCDKTFSHRAGLMNHRLAVHESQNQFPCTLCDKVFRWKTSLKRHLDKHNTQENNTVSTNKAYCEDCDIGFSSVCSLQRHLRNSLKHVTYDQLKFICAHCGHRFVDKTKLRDHIEEKHLYRTFQCNICHKPSKNRVGLEQHIRTVHKGRPNNRICHHCGKGFPTKVQLESHIRTHTGERPFMCEYCPVTFSQQSNLYKHHRQVHLNMKSKRYPLCKKSKVDGNQTGDPQPTFPIAIMQYVPDNTFTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00954948;
- 90% Identity
- iTF_00954948;
- 80% Identity
- -