Basic Information

Insect: Maniola hyperantus
Gene Symbol: -
Assembly: GCA_902806685.1
Location: NC:12131818-12151246[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00096 0.037 14.0 0.5 1 23 281 303 281 303 0.97

2 12 0.0002 0.0079 16.1 1.3 2 23 311 332 310 332 0.93

3 12 0.049 1.9 8.7 1.4 1 23 336 358 336 358 0.97

4 12 0.00089 0.034 14.1 0.7 1 23 363 386 363 386 0.98

5 12 0.0014 0.055 13.5 0.1 1 23 390 413 390 413 0.94

6 12 0.01 0.4 10.8 0.2 2 21 431 450 431 455 0.92

7 12 6.9e-05 0.0027 17.6 0.5 3 23 465 486 465 486 0.98

8 12 0.39 15 5.8 0.5 3 23 507 528 505 528 0.95

9 12 8.9e-06 0.00034 20.4 0.5 1 23 539 561 539 561 0.98

10 12 1e-05 0.0004 20.2 2.3 1 23 567 589 567 589 0.99

11 12 0.11 4.1 7.6 3.2 1 23 595 617 595 617 0.96

12 12 0.00011 0.0044 16.9 0.1 1 23 623 646 623 646 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00096	0.037	14.0	0.5	1	23	281	303	281	303	0.97
2	12	0.0002	0.0079	16.1	1.3	2	23	311	332	310	332	0.93
3	12	0.049	1.9	8.7	1.4	1	23	336	358	336	358	0.97
4	12	0.00089	0.034	14.1	0.7	1	23	363	386	363	386	0.98
5	12	0.0014	0.055	13.5	0.1	1	23	390	413	390	413	0.94
6	12	0.01	0.4	10.8	0.2	2	21	431	450	431	455	0.92
7	12	6.9e-05	0.0027	17.6	0.5	3	23	465	486	465	486	0.98
8	12	0.39	15	5.8	0.5	3	23	507	528	505	528	0.95
9	12	8.9e-06	0.00034	20.4	0.5	1	23	539	561	539	561	0.98
10	12	1e-05	0.0004	20.2	2.3	1	23	567	589	567	589	0.99
11	12	0.11	4.1	7.6	3.2	1	23	595	617	595	617	0.96
12	12	0.00011	0.0044	16.9	0.1	1	23	623	646	623	646	0.97

Sequence Information

Coding Sequence: ATGGGAGAGGTAAATGTGTGCAGAATATGCCTTTTGGAAGATGTTAAGCTGCATAGCCTGTATACTTACCCATTGGAAACTTGTTATAAACTTTTAGTTGGCGATAatGCACTTACGTCATTATATCTGCCAGTTACGGCTTGCTACCAATGCGCAGCTCAGCTGAGAAGACTGTACTTCTTCAAAGAGAAGTGTTTGAGAGCTCAGGCGGCTTTAACTGACATACTGCAAACTTGTGGAGTGATAACAAGAGACACAATAAAGCAAATTGACAGACAAAACTTACACTTAATCGACTACTTAGCCATACAAAGATTACcaaacataaatataatatcagATCTAATCGATGTCAAAGAAGAGCCTTTTGAAGTCGCCgaaaattattttgatgacaAAGAAAGTATCAAACTTGAAGATGGTTTTGATGAGGTGACACCTTTGTCAACTGATGACGATGAACCTCTATCTGTTCATAAAGAGAAGAAAGAAGAGAGCGGAAAGAAAAGGAAAAAGAGTAGTAAGAGAAAAGAAATTGACTCAGAGACAAATGAGATTCATGAGCGATTCAAGTTCGATGTGGAAGTTGAAATTCCAGAACCAAGCACAATACTCCAAGATATCCCGGAAGTTATGGTAAAACGTAAGCGTGGTCGGCCTAGGAAGAATGACGTGGCATTGAAGAATTTAGAGAAGACACGAAGAACTAAAAACACTGGTGGAGTTCTCACGGACGATATCGATTTGGAGAACTATTGCACCGTTATCAAGCTGTCAGAAGAAGAACAAAAGGAGGAGATCAACAAGCGACAACATTCGGCTAACTACCTCAACGCGCTGTACCAGTGCACTCTGTGCTACAAAGGCTTCATAGACGCCGACGCGTGGAAGCACCATGTTGGCAAACACGACCCGAATGCAGGCGACATCGAGTGCCCTATCTGCAAATTCCGGTTCAAGACGAGGCGGACGCTACAGAAGCACTCCGCCAACCACGAGAAGAAGTACGCCTGCAAGTCTTGCCAATACGTTTCTAGGACTACAACCCAGGCGAAGCAACACCAGCGATGGCACAAAGGAGTTACATACAAATGTCAATACTGTGACGAGATTTTGACAAAATGGACTTCATATCTGAGTCACGTGCGCATCAAGCACCCGTCGGAGTTCATTTGCGGCGTGTGCGGGTACTCCTTCGTCAGCAACCTGGGCCTCAACATGCACAAGACTATGATGCACAAGGATGTAGTTGATAAAGAAGAACTAGAGGGGGAGAATGATGACACGCCATATTGCGAGCAGTGTGACGTCAGATTCATATCGATTGCGGCGTTCAAGCGACACATGGTCACCTCCGTCAAACACACGCAAAGCACAGACTTTAACAATGGGTGTCGAATGTGTGGAGAATCGTTCCCAGATGCCGAGTCGTTGAGGGTACACCACAGGCGAGCTCACGCCAAAAAGAGGCCCAAGAACTATGGCAAGAAACCCAACTCGCTAACCTGGCCTACCAACTGCGAACATTGTTCTGAAGAGATACCCAACGCGCGGGAGTACTGGTCGCACTTCCGGCGGGCGCACCCCGATAAGAACTACCCCATACAGAAGAACTACATCTGTGATATCTGCGGAAAGAGCTTCCGGGGTAACGCTTTCCTAGTATAccacaaacgaacacacttcgAAGAGCGCGCATTCAAATGCCAGCAGTGTCCTAAAGCGTTCTTCAACCGCACTAACCTGCAAATGCACGAGAAGACTCACTCCGACCATAGACCACACGCTTGCACTGTCTGTGCAAAGGCTTTCAAGTGCAAAGGCGCTCTGGACAGGCATTTCAGGAGCCATACAGGCGTGAAACCCTATGAATGCGAAGTGTGTGGGAAGGCATTCGCCCAGTCGAATAGCAGGAAGCTGCACGTGGCGACGGTGCACCTCAAACAGCCGTCGCCGTACATCAGCCGCTCCAGACTCGAGCGGAGAAACAAGACTCAGGCGCACAAAGACCAGCACAACATGCCTCAGTTCCTGTACCAGTGA
Protein Sequence: MGEVNVCRICLLEDVKLHSLYTYPLETCYKLLVGDNALTSLYLPVTACYQCAAQLRRLYFFKEKCLRAQAALTDILQTCGVITRDTIKQIDRQNLHLIDYLAIQRLPNINIISDLIDVKEEPFEVAENYFDDKESIKLEDGFDEVTPLSTDDDEPLSVHKEKKEESGKKRKKSSKRKEIDSETNEIHERFKFDVEVEIPEPSTILQDIPEVMVKRKRGRPRKNDVALKNLEKTRRTKNTGGVLTDDIDLENYCTVIKLSEEEQKEEINKRQHSANYLNALYQCTLCYKGFIDADAWKHHVGKHDPNAGDIECPICKFRFKTRRTLQKHSANHEKKYACKSCQYVSRTTTQAKQHQRWHKGVTYKCQYCDEILTKWTSYLSHVRIKHPSEFICGVCGYSFVSNLGLNMHKTMMHKDVVDKEELEGENDDTPYCEQCDVRFISIAAFKRHMVTSVKHTQSTDFNNGCRMCGESFPDAESLRVHHRRAHAKKRPKNYGKKPNSLTWPTNCEHCSEEIPNAREYWSHFRRAHPDKNYPIQKNYICDICGKSFRGNAFLVYHKRTHFEERAFKCQQCPKAFFNRTNLQMHEKTHSDHRPHACTVCAKAFKCKGALDRHFRSHTGVKPYECEVCGKAFAQSNSRKLHVATVHLKQPSPYISRSRLERRNKTQAHKDQHNMPQFLYQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01092369;
90% Identity: iTF_00954879;
80% Identity: -