Mhyp010586.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola hyperantus
Gene Symbol
-
Assembly
GCA_902806685.1
Location
NC:1018128-1023724[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 2.4e-07 9.2e-06 25.4 1.0 1 23 508 530 508 530 0.97
2 14 0.024 0.92 9.6 2.2 1 23 536 558 536 558 0.97
3 14 9.3e-05 0.0036 17.2 1.9 1 23 564 586 564 586 0.97
4 14 5.2e-05 0.002 18.0 5.3 1 23 592 614 592 614 0.98
5 14 1.4e-05 0.00055 19.8 3.4 1 23 620 642 620 642 0.99
6 14 0.0056 0.21 11.6 3.9 1 23 648 670 648 670 0.98
7 14 0.0011 0.043 13.8 1.3 1 23 676 698 676 698 0.98
8 14 0.024 0.91 9.7 1.7 1 23 704 726 704 726 0.98
9 14 0.019 0.75 9.9 6.3 1 23 732 754 732 754 0.99
10 14 6.1e-06 0.00023 21.0 2.2 1 23 760 782 760 782 0.98
11 14 0.00021 0.008 16.1 3.4 1 23 788 810 788 810 0.96
12 14 0.0028 0.11 12.6 3.9 1 23 816 838 816 838 0.96
13 14 4.2e-06 0.00016 21.5 2.4 1 23 844 866 844 866 0.98
14 14 6.3e-05 0.0024 17.8 2.5 1 23 872 896 872 896 0.92

Sequence Information

Coding Sequence
ATGCGGTGTTGTGTGCCTTTCTGCAATAATACTGCAGATAACGTGACCACAACGGACGGTAACGGGATCAGTTTTCATGGTTTCCCCCGCGAAGGCAGTCTCCGTGCAGCTTGGCTCAGGGCCCTCGGCAAGCAAGGCAGTCAGCTGCCAGACTCTGCCGTGGTCTGCTCGCGGCACTTTCTAGATGATGACATTTGTGAAGCAGAAAGTGGATTCAGGCAACTAGTTGCTGGTGCTATTCCTTCAACAGTGCAGGTTTGCATGATATGTCTAGACACTGACAGCAAGCTGTGTCTAATGAGCAAACACAATTTGGAAGGAGCATATGAACAGTTAACTGGACATACTGTTTTGTGTAATGAATTCCTTCACTTAAAACAAACACTCTGTGTACAATGTGCTCAGAGATTGAGAAACTTTAGTAGGTTTagagacaagagcttgagagcCCGTGCACTGATGATGGACTTGGTTGACAAACATGAATTATTAACAATACAACATATACAGATGATAGATCGCACAAAACACCAACTGAAGAGTAACATTGTGTGGACTGTGCTAGGCCCCGACCCCTGTGAGTTATACATACCAGAACATCCCTcggaagacagacagacagaattaGAGGAAACAGTAGACAACATTGTAGTAAAAATTGAAGCAAGGGATGACTCTGTGTTGGACACAGAAGTGACAAATGATGATGACAATAAGGTCTACGGTGGATTTGGTGCATCTAACGAAGAATGCTTATCTAATGAAAACATGAAGTTGCAAACGCAACTTCTGAATGAAGCTCTTTGCAAAGCTCTCAAGGGGAAAGCACCAGCTGCAGAACAAGTGGCTGAGACGCAGGATCCGATAAAGTATGAAAGTGCTCCCATCCAATGTATACTTTGTACTGAGGAATTCCTCCATGTACATGCGTACGTGCAACATATGCACTTGCATCTGCAGAACGGTGCCGGCGAGGAAGCCAGTGCCGCGTCACAAGTGGCTCAGCGCTCTGTCCCCTCACTCTCTGCACTCAGCACTAATGACAAACTGAGCATTTGGAAGCAGAACGTTGAGTCTTGTCCTTCTGCAGACTTGCCTCAAACTGTAGCTGCTTCCTTGCCCGCGAGACTTGCGACAAATAATGCCAACAAAGTGCATGCAACTGAAGAAGCCAATAATACAATCGGGGAAAGTGAACGAGGCCCTGAAACTAACTATGGCGAGGTAGCTGTAAGCAACAATAGGGCACACATAAACCTAGATAGACTAACTAATTGTGTGGTCAAGTTATATGATTGTAAAAAGTTTAAAGTTGTGCCTAGACAAGACGCATCACACACGAAAACACGGAAAGCTGTTAGTTCTTATGAAAATCAGAATATTGATAATGCGTCTACAATATCTAAAGAGTATCGAGCAATAAGTTATAATGTAGTCCCTTCAACAGAAAACATTAAACCGGTCACTAATGAAGTAAGAGTTAAAAAAAATAATTCAAATACATTTCCTGAGAAAAAATCGTTTACTTGTGACATTTGCCAAAAGATGTTTAAACGGAAAAGTCTCCTAATTAAACACATCCAGGctcataacaaaataaaaccttATGCTTGTGCATtttgtaaatttaaaactgcGCATAAAGGCAATTTACGGTATCACGTGAAAATTCACACTGGGGAAAAACCTTTTGCTTGTGAGATATGCAATTATAGAAGTACAACAAATAGTCATATAGTGAGGCACATGCAAACCCACACTGGGGAAAAGCGTTATGCATGTAGTtcatgcaattataaatgtgcGCGAAATAGtcatttagtgaggcacatgagaactcacagtAAGGGAACACCTTATTCATGTAATTTATGCGAATATGAATGTAAACAAAATAGTTCTTTAGTTAAACACATGCGAACTCACACTAGGGGAAAACTTTATTCGTGTAGTTTATGCAAATATAAATGTTCAACTGATACTCGTTTAGAGAACCACATGAGAATTCATACTGGGGAAAAACCTTATTCGTGTAGTGTATGTAAATATAAATGTTCAACGGGTACTGGTTTAGTGGTGCACATGAGAATTCATACTGGGGAAAAACCTTTTTCGTGTAGTGCATGCGAATACAAATGTTCAACAAATAATCGTTTAGTGGAGCATATCAGAATTCACACTGGGGAAAAACCTTATTCGTGTAATTCATGTGAATATAAATGTTCAACACACACTCGCTTATTGGTGCACATGCGAACACACACTGGGGAAAAACCTCATAGttgtaagttatgcgattatAAATTTGTAGATAGAGGTGGTTTAATGAGACACATGAAAACGCACACTGGGGAAAAGCCTCATGCTTGTACGCTATGCGATTATAGATGTTCGAGAAATAGTGATGTAGTGAAACACATGAGAATTCACAGTCAGGAAAAACCTTATTTGTGTAGTTTGTGCGCATATACATGTACACACAGTAGTTATTTGGTGAACCACATGAAAATTCACACCGGACACAAGCCTTATGCTTGTACGatatgcaattataaatgtacaaggAATGATTATTTAATTGTGCACATGCGAACTCACACTGGGGAAAAACCTTATAGTTGTAAGTTATGCAATCATAAATTTAGAGATAAAGGCGGTTTAGTGAGACACATGAAAATTTACAATCATTTTTCGTAA
Protein Sequence
MRCCVPFCNNTADNVTTTDGNGISFHGFPREGSLRAAWLRALGKQGSQLPDSAVVCSRHFLDDDICEAESGFRQLVAGAIPSTVQVCMICLDTDSKLCLMSKHNLEGAYEQLTGHTVLCNEFLHLKQTLCVQCAQRLRNFSRFRDKSLRARALMMDLVDKHELLTIQHIQMIDRTKHQLKSNIVWTVLGPDPCELYIPEHPSEDRQTELEETVDNIVVKIEARDDSVLDTEVTNDDDNKVYGGFGASNEECLSNENMKLQTQLLNEALCKALKGKAPAAEQVAETQDPIKYESAPIQCILCTEEFLHVHAYVQHMHLHLQNGAGEEASAASQVAQRSVPSLSALSTNDKLSIWKQNVESCPSADLPQTVAASLPARLATNNANKVHATEEANNTIGESERGPETNYGEVAVSNNRAHINLDRLTNCVVKLYDCKKFKVVPRQDASHTKTRKAVSSYENQNIDNASTISKEYRAISYNVVPSTENIKPVTNEVRVKKNNSNTFPEKKSFTCDICQKMFKRKSLLIKHIQAHNKIKPYACAFCKFKTAHKGNLRYHVKIHTGEKPFACEICNYRSTTNSHIVRHMQTHTGEKRYACSSCNYKCARNSHLVRHMRTHSKGTPYSCNLCEYECKQNSSLVKHMRTHTRGKLYSCSLCKYKCSTDTRLENHMRIHTGEKPYSCSVCKYKCSTGTGLVVHMRIHTGEKPFSCSACEYKCSTNNRLVEHIRIHTGEKPYSCNSCEYKCSTHTRLLVHMRTHTGEKPHSCKLCDYKFVDRGGLMRHMKTHTGEKPHACTLCDYRCSRNSDVVKHMRIHSQEKPYLCSLCAYTCTHSSYLVNHMKIHTGHKPYACTICNYKCTRNDYLIVHMRTHTGEKPYSCKLCNHKFRDKGGLVRHMKIYNHFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-