Mhyp011299.1
Basic Information
- Insect
- Maniola hyperantus
- Gene Symbol
- ZEB2
- Assembly
- GCA_902806685.1
- Location
- NC:1011175-1019575[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.079 3 8.0 0.6 3 21 165 183 165 184 0.96 2 25 0.014 0.53 10.4 0.4 3 23 245 267 244 267 0.92 3 25 0.012 0.46 10.6 1.3 2 21 271 290 270 291 0.93 4 25 3.4e-05 0.0013 18.6 1.3 2 23 330 352 329 352 0.95 5 25 0.0027 0.11 12.6 1.0 1 23 385 407 385 407 0.98 6 25 0.0017 0.065 13.3 1.2 1 23 413 436 413 436 0.98 7 25 0.0046 0.18 11.9 0.2 3 23 447 468 446 468 0.98 8 25 0.13 5.1 7.3 3.2 1 23 478 500 478 500 0.98 9 25 9.1e-05 0.0035 17.2 1.0 2 20 638 656 637 658 0.94 10 25 0.0044 0.17 11.9 2.8 1 23 689 711 689 711 0.93 11 25 0.0047 0.18 11.9 2.1 2 23 717 738 717 738 0.95 12 25 0.075 2.9 8.1 5.2 1 20 741 760 741 762 0.93 13 25 2.6e-05 0.001 19.0 1.6 1 23 776 799 776 799 0.95 14 25 0.082 3.2 7.9 4.1 1 23 805 827 805 827 0.95 15 25 1.2 44 4.3 0.5 1 23 861 884 861 884 0.93 16 25 4 1.6e+02 2.6 0.1 1 13 891 903 891 905 0.85 17 25 1.7e-05 0.00064 19.6 1.0 2 21 1008 1027 1007 1028 0.93 18 25 6.2 2.4e+02 2.0 3.8 3 23 1063 1084 1061 1084 0.96 19 25 0.00011 0.0041 17.0 0.6 2 23 1090 1111 1089 1111 0.96 20 25 1.3 48 4.2 1.0 2 20 1115 1133 1115 1135 0.91 21 25 0.0001 0.004 17.1 2.0 1 23 1161 1184 1161 1184 0.95 22 25 0.0005 0.019 14.9 0.5 1 23 1190 1212 1190 1212 0.95 23 25 0.11 4.3 7.5 0.1 1 23 1218 1240 1218 1240 0.97 24 25 0.0016 0.061 13.3 0.4 1 23 1246 1269 1246 1269 0.94 25 25 0.00062 0.024 14.6 1.5 2 23 1276 1298 1275 1298 0.96
Sequence Information
- Coding Sequence
- ATGAGTAGGCAGGTTGATGTAAAAGCTTTAGTATCGCACGTTATACGAGGAGACGGGATTAACAAGTGCAGAATTTGTATGGGGGACACTTCAGAAGGACAAGTACGTTTAAGTGATACAGTTATTATGGAAGGAGATAAGCCCGTTACATTATCTCAACTGCTCGAGATCGTAACTGGAATTCAGGTGCCGCTGGAGGGCGACCTGCCAGCTGGACTGTGCATGGAATGCTCCACGAGTGCTGTAAATGCTGCTAACTTCAGAGCCATGTGCAGGGAGACATCCTCCAAGTGGAACATGACGTTACAACTTCTGTGCGACCTACCCTCACAGCGCTTGGAGAAGGACAAGATTATGTTCGTTATAATGGGCGATAATCAAATGATTGTTGTTATTGATGAAAAAGATTTGGACATAAACATAGCATCGGAGAGACTACGGACACATTTGCCCTCACAGGTGGATTTTAACGAGCCAATAGACACAAAAGGTTGTCCGAGTTGCAGTAAAAAGTTTAATCATCCACTAAAACTGTATATCCATTTAAGAGGATCGATTGATATGACACGAGCTTGTTATATATGTAGCGAGATTATGACGCGTGATGAACTAGTCTCACATCTTGATGAAGCCCATAACATAGAAGCTTATGATTGCAAAAAATGCCCTGCCTTACttctaacaaataataaatatatccaGCATTTAAACAAAGCACATTCCCGCGGTGCGTGCTCTTGCATAGACTGTGGACAGTCATTCCAGTCCGAACAAGCGTTTTACGCGCATATGTCTGTACACAGACGAAAAACTTGTCCGGGTTGCGATAAAATATTCCAAAACCAAAGCTGCTACTTGTATCATGTCAAAAACTGTAGCAATTTAAACAAAAGTTGTAAAACAACAAAAACGAGGGTAGTTATCAAAAACGAGAACAGCGAAAGGGATATTCGGGTCGGTATACGTGGTAGCACAGATAATATATGCAGCTGTGATTATTGCGGTAAAAGTTTCGCCAAAAAAAAGTATGTGACGGCACATATACAAATAATTCATATGAAAAACACTCATGCACCTTGCGCGTATTGTGGCAAGCTTCTAGCTACAGCACATATGACAGAGCATCTAAAAAAACACGAGTTAGACTTGTCCTTTAAGTGTGAACACTGTGGGATTGTCCTTAAGAGTAAGTTGGGTTACGTCCAGCATTTGAGATTGCATACAGGGGAACGCCCGTATTCTTGCAAGATTTGTAAGGAGAGTTTCAGCGCTTCGTCGAGGCGCTCAGAGCATATGCGTAAAGCACACCAAAATACCGATGTGATACTAAAACATGGTTGTAAGCTCTGCCCTGCCAAATTTGGACTGCCTTACAGACTAAAAAGGCACATGAGATCGGCACATACAAATGATAGTGAAGAAGGGGAACAGTTTGAGTGTGCTGAATGCCACGAAAAGCTTGACTCACGCCGTGGGTTATTGCACCATAGCAGGAAACATCAGAAAGTCAACTTCCCATTTAAGAGACCtgagaaaaaaattatgttgaAAGTGTTTAGTGAACCAGACTGTATCTTCGCGGAGAATGACCTGCCCGGAGCCCTATGCAGCGAGTGCACAAACGACACATTGTTCGCGTGGAAGTTCAGATTGCTATGCGGCAGTTCTGTCCAAGAATGGAGTCGAGCGACCGAAGTCCTGACTAAAAACACAGAAAATTTATTTGTCAACCCAGATGATACAGTCGTTTACCTATGCTCCACAAAAGAAGGCGGAATTTTCAAAGACCATATTCCCAAAATATATACCTTAACAGAAGCTGCCGATAAACTCAATGATATCCTCAATACGGACAGAAAACGCGAACGGGAGAGTATAAAAAACAGAGTGCCAAAACATCGCCTCAAAACCAAATGCCGGAAGTGCGGTAAAGTGTTCAGTCACCCCCAATATTTGAACCAGCACTTGGTGAGATCTACCAAAGGCGCTTGCACTATTTGCGCTAAGATTCTAAGTAAGGAAAAGTTGCCAAATCATTTGGAAATCGTTCACGGGATTTTCGTTTACGCTTGCAAGATTTGTCACCAAATGTTCGACGACTCATCAAGCTTGGACAATCATAACCATCTCCACGGATCGAATTCACCACAGTGCAGGATATGCAAGCAAGGTTTCAAAACCGAGAGGTCTCTACACGCTCACATGTTCGCTCACACATTATTTAGCTGCTCGAATTGCGGCAAAACTTTTGAGAATCGAAAATGCTATATGTATCACAAAGAGCACTGTACAGAGACCAAACCTTATACCGAAGTTGAAGGGATATACGAATGTCACGATTGCGGCCGGAAATATTCTAAGAAACCGTCGCTAAGGATACATATAATACAAAAGCATTTGTATGTCCTACCGTTTGTTTGTCAGATATGTGGGAAGCGTAGTTCCACTAAAAATCATCACAAGTCACATGAGCTTGTTCACAAAACAGAACGTAAGATATACGTGTGTGAGTGTGGCGCGAAAATGCGTACTGCCCTCGGTTTTAATATGCACCAAAGAATCCATTCTGGAGAAAAGCCGTACGAGTGCGAGGAATGCGGCGATAGATTCCTATCAGCTTCTAGAAGGTTGGATCACATGAAACGGAGGCACAGGGGAGGTGCCACTGCGCATAATTGTGAGAAATGCGGTGCCGGTTTCATCAGGGAAGAAGAGCAGCTATGTCCTCAGCTACTGTGCATAACATGTACCCACGTGGCCACAACAGCATACGAGTTCCGTGCATTCGCGAGCCATTCACAAAAACTATGGGCCAATTGCGTTACCTCCATAGAAAGTCTATTCCCATTGAAGACCCCGAAGTCGTTTTACGCGATCATAAAAGACAATTTGCTGGTCCAGAGTGTTAACAATTTTGAGGGTAGTACCAAAGAATTGGTGCATCACTTGTCGAACCGTTTCAAAAAGAAACCGGTAACCCCAGAACGGAAACCCAGACACCCACGTACAGGGCCTTCCTGCGATTGTACTGACTGTGGGAAAAGTTTCTCAAGTCCCTATTTCCTTAATGTCCATCTCCGTAACAGTGGTCAGAAGGAAGCGTGTTGGTTATGTGGTACTATGCTCATACGTGGTCTACAAATGAAAGAGCACCTATCAGAAATGCATAAAACGGCTATGTGTTTGTGTTCAGAATGTCCGTTGCTTTTCAAAAGTGTATTAGAAGTGAAGCAGCATCAAAAAAAGTGCCACGGACCTGGGAAATTGACTTGCACCGATTGCGGACGGACTTTCCAAAGGAACGCGTCGTTTGAAGTGCATTCTCAGATGCATAATGTTAGGACTTGTCGTGCTTGTGGGGTGCAGTTCACTAATCGAGGCTGCTACAGAGAGCACAGAGCGAAATGCGAACCCGATGCTAAGCCTGACTTGAAAACTATACCTCGCAGTCGTCGATCGAACATCCGAGACCCAGCGACCTTCACGTGTGACTATTGCAATAAAACTTATCATTCGCGACCTCAACTAAAAAATCATATTCTATGGATCCATATGGATATACGACCACATCAATGCCAATGGTGTGGCAAAAGGTTTTATACCCCAGCACGGTTGGCAGAACATACAGTTGTACATACCCGGGAAAGGAATTTCGAATGTGATATCTGTGGCGCCAAATTGGTTTCCAAAATGGCGGCGGTGTACCATAGACGACGGCATACGGGGGAAAAACCGTATGAATGTCCGGATTGCGGGGAAAAGTTCATTTCTTCGTCCAGGAGGTCTGAGCATGCTAAGCGAAGACATAATAAGGGGTCTCGGTTGCAGTGCACTCTATGCGTCTCCAGTTTCGTGAGGAGTCATGAGCTGAGGAAGCATATGGAGAAAGCACATAACCCTGATACCCAGAATTTGCTCAAAGTGAAGAAGGTTAAAGAATTAATTGAAACAATTGGATGA
- Protein Sequence
- MSRQVDVKALVSHVIRGDGINKCRICMGDTSEGQVRLSDTVIMEGDKPVTLSQLLEIVTGIQVPLEGDLPAGLCMECSTSAVNAANFRAMCRETSSKWNMTLQLLCDLPSQRLEKDKIMFVIMGDNQMIVVIDEKDLDINIASERLRTHLPSQVDFNEPIDTKGCPSCSKKFNHPLKLYIHLRGSIDMTRACYICSEIMTRDELVSHLDEAHNIEAYDCKKCPALLLTNNKYIQHLNKAHSRGACSCIDCGQSFQSEQAFYAHMSVHRRKTCPGCDKIFQNQSCYLYHVKNCSNLNKSCKTTKTRVVIKNENSERDIRVGIRGSTDNICSCDYCGKSFAKKKYVTAHIQIIHMKNTHAPCAYCGKLLATAHMTEHLKKHELDLSFKCEHCGIVLKSKLGYVQHLRLHTGERPYSCKICKESFSASSRRSEHMRKAHQNTDVILKHGCKLCPAKFGLPYRLKRHMRSAHTNDSEEGEQFECAECHEKLDSRRGLLHHSRKHQKVNFPFKRPEKKIMLKVFSEPDCIFAENDLPGALCSECTNDTLFAWKFRLLCGSSVQEWSRATEVLTKNTENLFVNPDDTVVYLCSTKEGGIFKDHIPKIYTLTEAADKLNDILNTDRKRERESIKNRVPKHRLKTKCRKCGKVFSHPQYLNQHLVRSTKGACTICAKILSKEKLPNHLEIVHGIFVYACKICHQMFDDSSSLDNHNHLHGSNSPQCRICKQGFKTERSLHAHMFAHTLFSCSNCGKTFENRKCYMYHKEHCTETKPYTEVEGIYECHDCGRKYSKKPSLRIHIIQKHLYVLPFVCQICGKRSSTKNHHKSHELVHKTERKIYVCECGAKMRTALGFNMHQRIHSGEKPYECEECGDRFLSASRRLDHMKRRHRGGATAHNCEKCGAGFIREEEQLCPQLLCITCTHVATTAYEFRAFASHSQKLWANCVTSIESLFPLKTPKSFYAIIKDNLLVQSVNNFEGSTKELVHHLSNRFKKKPVTPERKPRHPRTGPSCDCTDCGKSFSSPYFLNVHLRNSGQKEACWLCGTMLIRGLQMKEHLSEMHKTAMCLCSECPLLFKSVLEVKQHQKKCHGPGKLTCTDCGRTFQRNASFEVHSQMHNVRTCRACGVQFTNRGCYREHRAKCEPDAKPDLKTIPRSRRSNIRDPATFTCDYCNKTYHSRPQLKNHILWIHMDIRPHQCQWCGKRFYTPARLAEHTVVHTRERNFECDICGAKLVSKMAAVYHRRRHTGEKPYECPDCGEKFISSSRRSEHAKRRHNKGSRLQCTLCVSSFVRSHELRKHMEKAHNPDTQNLLKVKKVKELIETIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -