Mhyp011553.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola hyperantus
Gene Symbol
-
Assembly
GCA_902806685.1
Location
NC:5743025-5751490[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.39 15 5.8 2.4 1 23 21 43 21 43 0.98
2 16 0.027 1 9.5 0.1 2 23 70 92 69 92 0.95
3 16 0.00088 0.034 14.1 1.5 1 23 113 135 113 135 0.98
4 16 7.3e-05 0.0028 17.6 0.4 1 23 139 161 139 161 0.98
5 16 0.00013 0.005 16.8 0.6 1 23 166 189 166 189 0.93
6 16 1.2 48 4.2 0.2 2 13 196 207 195 209 0.86
7 16 0.0013 0.048 13.7 0.4 2 23 438 459 437 459 0.96
8 16 0.36 14 5.9 0.2 2 23 486 508 485 508 0.90
9 16 0.002 0.076 13.1 0.2 1 23 529 551 529 551 0.99
10 16 0.00055 0.021 14.8 1.2 1 23 555 577 555 577 0.97
11 16 0.00037 0.014 15.3 0.5 1 23 582 605 582 605 0.92
12 16 0.012 0.46 10.6 0.9 2 23 612 634 611 634 0.91
13 16 2.2e-06 8.5e-05 22.3 2.7 1 23 641 664 641 664 0.98
14 16 0.0092 0.35 10.9 3.7 1 23 670 692 670 692 0.98
15 16 3.8e-07 1.5e-05 24.7 1.2 1 23 698 720 698 720 0.98
16 16 2.5e-05 0.00095 19.0 2.3 1 23 726 748 726 749 0.95

Sequence Information

Coding Sequence
ATGGTTATTGAGAACTCCAATGTCACTCCGTTTAAACCCAAATACTCGTACCAGAACGGCTTCCCATGCTTCTATTGCTCAATGTTATTCCATGACCTACCAAAGATGAGGGTACATCAACAAAAGCATACGAAAACAGAACTCAAGGCAGTACTAAGTACACAAGGAGCTGAAGCATTTATAGTCTACGTTGATATCACAGACCTGAAATGTACAATATGCAACGAAGAAATTCCAAATCTGCCCGAACTAAAATCACATTTAATCAAAAAACACGAGAAGAAAATGGCCAATTGCCCCGACCGTATTGTCCCTTTTAAAATAACCCCAAATTTGTTTGAGTGTCAAGTGTGCAAATGCAATTTTGAAACTTTCGGTGCGATGGAGCGTCACATGAACGTACATTTTAGGAATTATGTGTGCAAAGAATGTGGGACGGGTTACGTCACTAAAAGTCGTTTAAAAGGACATGTTAGACAACATAACGAGGGTAGTTATGAATGTGAGACATGTAAAAAAGTTTACACTACCCCCCTAAAGTTAAAAAATCATATTGAATTTGttcacaaaatgataaaaaggtTGAAATGTATGAAATGTGGTGAACattttgttaAAAAAATGAATGAAAGCGAACTCAATACTAAATACGGTGAATGCAGGTGTTGTTTCGCGCTGGGCCATCACCGCGATCTGATGAAGGAGTACGAGTGGAACGGCACGCgagaaatttattttcaaatatttttggaaTGCTTCAATGTGTttTTGTGCACCAAAACTGGTAAGAGCAGCTTGATATGCACATCCTGCGTGCTGCGGCTGAGAGATGCCACCAGCTTCAAGAAGATGGTGCTGGAAGCAGAGCGGAGCCTGACCAGCTGTAAAGGAGGTTCTGTGACTGATCCTGTGaccccatcatcatcaacaatgCTGATGGTGGAAATAAAATGTGAACCGGAAGACAGCTCCGACTCAAACGGAGAGAAGAATGACGAGAACTCCAATGATGATTCCATGCATGGGCAGGAACAGCTGGATCCCTCATCGATGCTCATAGTGGAAATAAAACGAGAAGGGGACGCAGGGTTTGAATCAAACGACGCCAAGCAGAATGATGATTCCAGCCAAGAACAAGtcaaagtaaaaaatagCAATCCCAGTACTGCATGCCGAAAAAAAAGACCTGGAACACCCGGCAAAGTGAAAGATAAGAATAGAAAGGAGAAACTAGCATATATTCATAATACTAGACTCATTATAGAAAACTCCAATGTAGCTCCATTCAAACCCAAATACCAGAACGGCGTCCCTTGCTTCTATTGCTCTAAGATATTCCAGGATATATCAGAAATGAAACAACACCAACAGATGCATACGAAAACTGAACTAAAGAATATACTAAATACACTAGGAGCTGAAGCATTTATAATCTATGTCGACGTCACAGACCTGAAATGTACAATTTGTAATGAAGAAATGCCAAATTTGGCCGAACTAAAATCACATTTCGTCAAAAAACACAAGAAGAAAGTCAAAGATTGCCCCGACCGTATGGTCCCTTTTAAATTGACCCCCAATGTATATCAATGTCAAGTGTGCAAAGGCAATTTTGGAACTTTCGGAGCAATGGAGCGACACATGAACGTTCATTTTAGAAATTACGTGTGTAAGGAGTGTGGGACGGGCTACGTCACTAAAAGTCGTTTCAAAGTACACTCTAAGCAACATAATGAGGGTAGTTTCGAATGTGAGACGTGCAAAAAAGTTTACACTACCGCCCTAAAACTGAAAAAACACGTTGACCTCGTTCACAAGATGGTCAAAAGGTTGAAATGTATGAAATGCGGCGAGCGTTTCgttaattatttcaaacaaCAGAAACATATGGTGGAAGAGCACGGGGAGGCGAGATTGGAGTACAAATGCAACTTCTGTGATAAGATATTTGACAGAAAATATCTATTATCCACACACATGAAACGAGATCACTTGGAAGAGAGggattttaaatgtgaaatctGTTCGTACACGTGTTTCGCTAAAAATGATTTGAAATATCACATGATAAAACACAATGGGTCGCGTATATTTGAGTGCTCGTTGTGCGACAAGTCATATGCGAGAAAGAAAACTTTGCGAGAGCATATGCGGATACACAATGACGACAGACGGTACGCGTGTCAGGAGTGTGGACAGGCTTTTGTACAGAACTGCAGCTTGAAAGGGCATATTAAAACGCATCATCCTGAATTGCAGATGCCGTAG
Protein Sequence
MVIENSNVTPFKPKYSYQNGFPCFYCSMLFHDLPKMRVHQQKHTKTELKAVLSTQGAEAFIVYVDITDLKCTICNEEIPNLPELKSHLIKKHEKKMANCPDRIVPFKITPNLFECQVCKCNFETFGAMERHMNVHFRNYVCKECGTGYVTKSRLKGHVRQHNEGSYECETCKKVYTTPLKLKNHIEFVHKMIKRLKCMKCGEHFVKKMNESELNTKYGECRCCFALGHHRDLMKEYEWNGTREIYFQIFLECFNVFLCTKTGKSSLICTSCVLRLRDATSFKKMVLEAERSLTSCKGGSVTDPVTPSSSTMLMVEIKCEPEDSSDSNGEKNDENSNDDSMHGQEQLDPSSMLIVEIKREGDAGFESNDAKQNDDSSQEQVKVKNSNPSTACRKKRPGTPGKVKDKNRKEKLAYIHNTRLIIENSNVAPFKPKYQNGVPCFYCSKIFQDISEMKQHQQMHTKTELKNILNTLGAEAFIIYVDVTDLKCTICNEEMPNLAELKSHFVKKHKKKVKDCPDRMVPFKLTPNVYQCQVCKGNFGTFGAMERHMNVHFRNYVCKECGTGYVTKSRFKVHSKQHNEGSFECETCKKVYTTALKLKKHVDLVHKMVKRLKCMKCGERFVNYFKQQKHMVEEHGEARLEYKCNFCDKIFDRKYLLSTHMKRDHLEERDFKCEICSYTCFAKNDLKYHMIKHNGSRIFECSLCDKSYARKKTLREHMRIHNDDRRYACQECGQAFVQNCSLKGHIKTHHPELQMP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-