Basic Information

Insect: Maniola hyperantus
Gene Symbol: -
Assembly: GCA_902806685.1
Location: NC:1260822-1265231[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00038 0.015 15.3 0.1 2 23 220 241 219 241 0.96

2 13 0.00093 0.036 14.1 4.2 1 23 248 270 248 270 0.99

3 13 0.00046 0.018 15.0 0.9 2 23 295 316 294 316 0.97

4 13 0.0028 0.11 12.5 1.8 1 23 337 359 337 359 0.99

5 13 0.00082 0.032 14.2 2.3 1 23 367 390 367 390 0.90

6 13 0.0002 0.0077 16.2 0.4 1 23 396 418 396 418 0.94

7 13 9.6e-06 0.00037 20.3 1.9 1 23 425 447 425 447 0.98

8 13 7.5e-07 2.9e-05 23.8 1.3 1 23 453 475 453 475 0.96

9 13 6.7e-06 0.00026 20.8 0.6 1 23 481 503 481 503 0.99

10 13 1.2e-07 4.6e-06 26.3 0.6 1 23 509 531 509 531 0.98

11 13 6.1e-05 0.0024 17.8 0.7 1 23 537 559 537 559 0.98

12 13 6.6e-05 0.0026 17.7 2.1 1 21 565 585 565 587 0.96

13 13 8.3e-05 0.0032 17.4 0.7 1 23 593 615 593 615 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00038	0.015	15.3	0.1	2	23	220	241	219	241	0.96
2	13	0.00093	0.036	14.1	4.2	1	23	248	270	248	270	0.99
3	13	0.00046	0.018	15.0	0.9	2	23	295	316	294	316	0.97
4	13	0.0028	0.11	12.5	1.8	1	23	337	359	337	359	0.99
5	13	0.00082	0.032	14.2	2.3	1	23	367	390	367	390	0.90
6	13	0.0002	0.0077	16.2	0.4	1	23	396	418	396	418	0.94
7	13	9.6e-06	0.00037	20.3	1.9	1	23	425	447	425	447	0.98
8	13	7.5e-07	2.9e-05	23.8	1.3	1	23	453	475	453	475	0.96
9	13	6.7e-06	0.00026	20.8	0.6	1	23	481	503	481	503	0.99
10	13	1.2e-07	4.6e-06	26.3	0.6	1	23	509	531	509	531	0.98
11	13	6.1e-05	0.0024	17.8	0.7	1	23	537	559	537	559	0.98
12	13	6.6e-05	0.0026	17.7	2.1	1	21	565	585	565	587	0.96
13	13	8.3e-05	0.0032	17.4	0.7	1	23	593	615	593	615	0.96

Sequence Information

Coding Sequence: ATGGATAATATGTTACGGAAAATAATATGCAGGACCTGTCTCACTGAGGCATCAGGCTATAAGTCTTTACTGAGCAAAATGGATGGGGACGATCGTACTGTACGAGAAGTATTAACTAATTTTACAAATGTGGACATATCAGTGAGCGATAAATATCCTAAACAGGTTTGTGATGAGTGCTACATAATGTTATTTAAAGCTGACGAGTTCAAAAAGCGATGTTTACAATCGGAAACTATATTAAAAAATGGTTTTCTCTCGCATACATTTGAAGAGTTAATAAAACGCGAATTGGGTAGTAATACAGATTTAAACGTCTCTAATTCATACACAAATACTCAGGTTACGAACAACAGTTACTTTGATAGTAGTTTAAAAAAGAATCACTCATCCACTGGCGAAATAGAAATGGCTATTGTAGAAAATTATTATCATCCAatagaaaactttaaaaatgatcAAAATTTGGTTAAAAATGAACAAGATGATTCCGTACATGACGATTATGATTTCACAGAAAGTACAGCTATAGAAAGCACTGCTATAGTTGAAAAAACATCAAATACAGGCTTGAGTATTCGAGATACGAATTCAAAAGAATATGATACAAGTAAAATGATCCAAAAACCTGATAGTAGCAAAAATCAAATAGCATTAATTTGTACAGTATGTAAcgaagaattttcaaatataGAACTTTTACAAATACATACGTTAACCCATAACGATAATGTCGAAAATTATCAATGTACTATATGCGATACTAATTTCACATGCAAATTGTCATTAAAAAGCCATATCAAAACACATAAAGTCAAAGCAAAAGTGAAACATAAGAAACGAAAAAATAACGAAAATAAAAACAGTCTAACTCTAATACTAACATGTCCGAAATGTAAAGAAAAATTTACCGTTATGGAATCATTCCAAGAGCATTTGAAAATGCATAAGGAAGGTAACGAAGAAAGTCTCGTTGATAATGTTAAGTTAAATAACGAAGTCCAGAGCTACCAGTGTTCGTTATGCATGCGTAAGTTTGAGCGGAGGCTGTCGTTAGTGACTCATATAAAACGACATGAAGACAAGGCACAGATAAAGTACCCGTGCAAGACTTGTAAAAGAGAATTTCAGCACAaggCACATCTAGAAAACCATGTAGTCCTGGTACATTCAAAGGAGAAAGGTTTTACTTGCGACATTTGTAATAAGAGTTTTTCCACACAAGACATTTTGGACGGTCATCAGGAAAGGCATAATAAAGTCAACAGGAAACATGAATGCAAGGTCTGCAGCAAATCTTTCACAATGCTGTCAACATTAACGGAGCATATAAAAATCCACACGGGTGAAAAACCGTACCTCTGCTCTGTCTGCGGGCGAGGATTCAGTCAGAAGAACAACATGACTCAGCACATGAGACGGCACCAGGGGCTGAAGCCGTTCAAATGTCAGACTTGCGAGAGGGGGTTCGTATCAAAAGGTGAACTAGAAGCCCACACTCGCAAGCACAGCGGGGCGCATCCGTTTGTATGTGACGACTGCGGAGGCAGTTTCACTACGTCCAGCTCTCTAACTAAACACAGgaGAATCCACACTGGAGAACGCCCATACGCCTGCGACTTATGCCCCATGAGATTCACCGTATTAAACACATTGAAGAACCATAGACGGACTCACACAGGTGAAAAACCGTATCAGTGCTCCCTTTGTGAAAAGGCCTTTACACAGAGGAACGATCTCGTCTCACATATACGATGTCACACTGGAGAGAGGCCTTATATATGCACGTGTTGTGGACAGGCCTTTAGGAAGGCCTCGGCGCTAAAAGTTCATATTAAAGTGCATGGGAAGGAAAGTTTGATTATGTAG
Protein Sequence: MDNMLRKIICRTCLTEASGYKSLLSKMDGDDRTVREVLTNFTNVDISVSDKYPKQVCDECYIMLFKADEFKKRCLQSETILKNGFLSHTFEELIKRELGSNTDLNVSNSYTNTQVTNNSYFDSSLKKNHSSTGEIEMAIVENYYHPIENFKNDQNLVKNEQDDSVHDDYDFTESTAIESTAIVEKTSNTGLSIRDTNSKEYDTSKMIQKPDSSKNQIALICTVCNEEFSNIELLQIHTLTHNDNVENYQCTICDTNFTCKLSLKSHIKTHKVKAKVKHKKRKNNENKNSLTLILTCPKCKEKFTVMESFQEHLKMHKEGNEESLVDNVKLNNEVQSYQCSLCMRKFERRLSLVTHIKRHEDKAQIKYPCKTCKREFQHKAHLENHVVLVHSKEKGFTCDICNKSFSTQDILDGHQERHNKVNRKHECKVCSKSFTMLSTLTEHIKIHTGEKPYLCSVCGRGFSQKNNMTQHMRRHQGLKPFKCQTCERGFVSKGELEAHTRKHSGAHPFVCDDCGGSFTTSSSLTKHRRIHTGERPYACDLCPMRFTVLNTLKNHRRTHTGEKPYQCSLCEKAFTQRNDLVSHIRCHTGERPYICTCCGQAFRKASALKVHIKVHGKESLIM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954818;
90% Identity: iTF_00954818;
80% Identity: -