Basic Information

Insect: Maniola hyperantus
Gene Symbol: -
Assembly: GCA_902806685.1
Location: NC:7080165-7097902[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.9e-07 3e-05 23.7 1.2 1 23 199 221 199 221 0.99

2 14 4.9e-06 0.00019 21.2 2.7 1 23 227 249 227 249 0.99

3 14 3.2e-06 0.00012 21.8 2.6 1 23 264 286 264 286 0.98

4 14 4.5e-05 0.0017 18.2 3.1 1 23 301 323 301 323 0.98

5 14 3.1e-07 1.2e-05 25.0 1.5 1 23 338 360 338 360 0.99

6 14 0.032 1.2 9.3 1.8 1 23 367 389 367 389 0.98

7 14 5.3e-07 2e-05 24.3 2.3 1 23 395 417 395 417 0.99

8 14 0.037 1.4 9.1 1.8 1 23 424 446 424 446 0.98

9 14 2.2e-06 8.3e-05 22.4 1.5 1 23 452 474 452 474 0.99

10 14 0.00041 0.016 15.2 0.7 1 23 481 503 481 503 0.99

11 14 2.4e-06 9.2e-05 22.2 1.9 1 23 509 531 509 531 0.98

12 14 0.0017 0.067 13.2 0.3 1 20 537 556 537 559 0.93

13 14 3.3e-05 0.0013 18.7 1.3 2 23 566 587 565 587 0.96

14 14 3.1e-06 0.00012 21.9 1.4 1 23 593 616 593 616 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.9e-07	3e-05	23.7	1.2	1	23	199	221	199	221	0.99
2	14	4.9e-06	0.00019	21.2	2.7	1	23	227	249	227	249	0.99
3	14	3.2e-06	0.00012	21.8	2.6	1	23	264	286	264	286	0.98
4	14	4.5e-05	0.0017	18.2	3.1	1	23	301	323	301	323	0.98
5	14	3.1e-07	1.2e-05	25.0	1.5	1	23	338	360	338	360	0.99
6	14	0.032	1.2	9.3	1.8	1	23	367	389	367	389	0.98
7	14	5.3e-07	2e-05	24.3	2.3	1	23	395	417	395	417	0.99
8	14	0.037	1.4	9.1	1.8	1	23	424	446	424	446	0.98
9	14	2.2e-06	8.3e-05	22.4	1.5	1	23	452	474	452	474	0.99
10	14	0.00041	0.016	15.2	0.7	1	23	481	503	481	503	0.99
11	14	2.4e-06	9.2e-05	22.2	1.9	1	23	509	531	509	531	0.98
12	14	0.0017	0.067	13.2	0.3	1	20	537	556	537	559	0.93
13	14	3.3e-05	0.0013	18.7	1.3	2	23	566	587	565	587	0.96
14	14	3.1e-06	0.00012	21.9	1.4	1	23	593	616	593	616	0.97

Sequence Information

Coding Sequence: ATGTCCCGATGGAGCCGCCGGCAAGTCGCCATTAGTTTCCCGGCACACTGGGGCGTGGGCGTCGGGGGCGTGGCGCGGGGCGTGGGCGTCCCCGTGCCGCCCCCCGGCGACCTACTCGCCACTATATCCATGTTCGAGCAGCAGATCAAAGCAGAGCCCATGAACTTTTACACACACCCTCATGTTAACACCGGGCCCCCGACTATAGTCCGCTCGGACTCCGCTCACGGCATCATTATGAACCAGCACACCAGGAGGACTCGAAGGAAAGCCTGTCGGTGCAGCCAGCAGGTGCAGCACCAGCAGGATCTGATGGCGCAGCACCAGCAGCAGGAACTGCAGCATGACGATGAAGTAGACAATTTGAGCTTCAAAGGCATGGAAGATGAAGGAGTCGAAATGGATATGGACGGCCGGCAATGTTCTCAGGGCATGGGGGTGGACATGGGGTCAGTTCAAACAAAGATGGAAGTCTCCACGGACAAGGATATACCACGGTCTAAGCCACAAGCTGTAaggtatgttgtGGCAAAGTCTTGGTCATCTGCTTCATCATATTATGTCCACATGAAGCTTCATTCAGGAAATAAACCCTTCCAGTGCACGGTTTGCGACGCAGCGTTCTGCCGCAAGCCGTACCTAGAGGTGCACATGCGCACGCACACCGGCGAGCGGCCGTTCCAGTGCGACCTGTGCCTCAAACGCTTCACGCAGAAATCCAGCCTCAATACGCACAAACGCGTCCACACCGATGAGCACATGCGCGCTTTGATGGTGAAGGAGCGGCCCTACAAGTGCGAGCTCTGTCAGATGCGCTTCACGCAGAGCTCCAGCCTCAACCGACACAAGAAAATACATACGGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGACACGGAAAGATACACACCGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAATGTGACATCTGTGACAAGCGGTTCACGCAGAAGTCCAGCCTTGGCACTCATAAACGTATACACACCGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATACACACCCGCACGCACACCGGCGAGCGGCCCTATCAGTGCGACATCTGCCTCAAGCGCTTCACGCAGAAGTCGAGTCTCAACATCCACAAGCGGACGCACTCAGTGCAGGGCCGGCCCTTCCAGTGCCTGCAGTGCCCAGCCGCCTTCACGTGCAAGCAGTACCTGGAGATCCACAACCGCACACACACGGGCGAGCGGCCCTACCAGTGCGACGTCTGCCTCAAGAGATTCGCGCAAAAGTCCACTCTCAATATACACAAACGAACGCACACAGTGCAAGGGCGGCCGTATCAGTGCATGGAGTGCCCGGCGGCCTTCACTTGCAAGCCGTACCTGGAAATACACATGCGCACGCACACTGGCGAGCGGCCCTTCGAGTGCGATGTCTGTTACAAACGCTTCACGCAGAAGTCTACACTCAACATTCACAAGCGAATTCATACCGGGGAACGTCCATACGCATGTGATATTTGCCAAAAGCGGTTCGCGGTGAAGAGCTATGTAACAGCACACAGATGGTCGCACGTCGCCGACAAGCCGTTGAATTGCGAGCGATGCTCGATGACGTTCACGTCCAAGTCGCAATTCGCGCTACACATCCGCACGCACTCCAGCGGCCCGTGCTACGAGTGCAGCGTCTGCGGGCGGACCTTCGTGCGCGACAGCTACCTCATACGCCATCACAACCGCGTGCACCGCGAGAATCACAGCAACATGTCGGCGAACAGCATCGGCACCATCAGCAGCGCGGCCAACGCCAACTCTAACGGCAACTACGACTCGCCCGGCGTGTGCGACCTCAGCTTCGTGCCGATGGTGAACCGCTACATGACGTCGCAGGGCACGCAGGTGTCGATGCAGGACACGCAGAGCAAGATGTCCGCCATGTCGCCACAGTCCATCGCCTCCATGTCGTCCCCGCCGCCGTCGCACACGCCCACGCCGCAGCCGCCGATGTCAGCCATGCGCCACGCTGATTGA
Protein Sequence: MSRWSRRQVAISFPAHWGVGVGGVARGVGVPVPPPGDLLATISMFEQQIKAEPMNFYTHPHVNTGPPTIVRSDSAHGIIMNQHTRRTRRKACRCSQQVQHQQDLMAQHQQQELQHDDEVDNLSFKGMEDEGVEMDMDGRQCSQGMGVDMGSVQTKMEVSTDKDIPRSKPQAVRYVVAKSWSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKERPYKCELCQMRFTQSSSLNRHKKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCERCSMTFTSKSQFALHIRTHSSGPCYECSVCGRTFVRDSYLIRHHNRVHRENHSNMSANSIGTISSAANANSNGNYDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTQSKMSAMSPQSIASMSSPPPSHTPTPQPPMSAMRHAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00843713;
90% Identity: -
80% Identity: -