Basic Information

Insect: Maniola hyperantus
Gene Symbol: -
Assembly: GCA_902806685.1
Location: NC:3319917-3328345[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00065 0.025 14.6 0.6 1 23 30 53 30 53 0.97

2 18 0.00021 0.008 16.1 4.8 1 23 59 81 59 81 0.99

3 18 7.3e-07 2.8e-05 23.8 1.1 1 23 87 109 87 109 0.98

4 18 0.0014 0.053 13.5 0.2 1 23 115 137 115 137 0.98

5 18 7e-05 0.0027 17.6 1.4 1 23 143 165 143 165 0.99

6 18 9.3e-05 0.0036 17.2 2.2 1 23 171 193 171 193 0.98

7 18 6e-05 0.0023 17.8 0.9 1 23 199 221 199 221 0.94

8 18 5.3e-06 0.0002 21.1 4.3 1 23 227 249 227 249 0.98

9 18 6.9e-07 2.7e-05 23.9 0.9 1 23 255 277 255 277 0.98

10 18 0.0025 0.096 12.7 11.2 1 23 283 305 283 305 0.98

11 18 7.8e-05 0.003 17.5 3.6 1 23 311 333 311 333 0.98

12 18 0.071 2.7 8.1 3.0 1 21 339 359 339 362 0.94

13 18 0.0072 0.28 11.3 7.1 1 23 368 390 368 390 0.98

14 18 0.0016 0.063 13.3 2.2 1 23 396 418 396 418 0.99

15 18 0.0012 0.047 13.7 8.7 1 23 424 446 424 446 0.99

16 18 0.00011 0.0042 17.0 1.0 1 23 452 475 452 475 0.98

17 18 0.00057 0.022 14.7 7.1 1 23 481 503 481 503 0.98

18 18 9.2e-06 0.00035 20.4 0.9 1 23 509 531 509 531 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00065	0.025	14.6	0.6	1	23	30	53	30	53	0.97
2	18	0.00021	0.008	16.1	4.8	1	23	59	81	59	81	0.99
3	18	7.3e-07	2.8e-05	23.8	1.1	1	23	87	109	87	109	0.98
4	18	0.0014	0.053	13.5	0.2	1	23	115	137	115	137	0.98
5	18	7e-05	0.0027	17.6	1.4	1	23	143	165	143	165	0.99
6	18	9.3e-05	0.0036	17.2	2.2	1	23	171	193	171	193	0.98
7	18	6e-05	0.0023	17.8	0.9	1	23	199	221	199	221	0.94
8	18	5.3e-06	0.0002	21.1	4.3	1	23	227	249	227	249	0.98
9	18	6.9e-07	2.7e-05	23.9	0.9	1	23	255	277	255	277	0.98
10	18	0.0025	0.096	12.7	11.2	1	23	283	305	283	305	0.98
11	18	7.8e-05	0.003	17.5	3.6	1	23	311	333	311	333	0.98
12	18	0.071	2.7	8.1	3.0	1	21	339	359	339	362	0.94
13	18	0.0072	0.28	11.3	7.1	1	23	368	390	368	390	0.98
14	18	0.0016	0.063	13.3	2.2	1	23	396	418	396	418	0.99
15	18	0.0012	0.047	13.7	8.7	1	23	424	446	424	446	0.99
16	18	0.00011	0.0042	17.0	1.0	1	23	452	475	452	475	0.98
17	18	0.00057	0.022	14.7	7.1	1	23	481	503	481	503	0.98
18	18	9.2e-06	0.00035	20.4	0.9	1	23	509	531	509	531	0.96

Sequence Information

Coding Sequence: ATGAAAAATGTAACTACATCAAAGGGctgtaatgaaaacaaaaatccaTCGTTTCAATTTATCAGCAGGAATACTAAGAGAAAACTTTTCGTTTGTGATATTTGTCATAGGACTAGTAAAATTAGAAACAATCTAGTTGAGCATATTATGAGAGCTCACACTGGGGAAAAGCCATACTCCTGTGCGCATTGTCAATACAAATGTGTGGATAAAGGGTCCTTAAGGTCTCATCTGAGGACGCACACTGGTGAAAAATCCTTTACATGtaatatttgtaataaaaagtTTGCATACAAATCAGCTTTGGTCACTCATACGAGAATACACACAGGCGAGAAACCCTATGCATGTGAGCTGTGTGACTTCGAAACTGGATCTAACAGTACAATAATTAGACACATGCGATCTCACCTTGTTGAAAAACGTTACCGATGCGATGTGTGTCAAGCTCAATTAAAAACGAAGTCTACTTTAAATAGGCACAAGAGAATTCACACTGGGGTCAAGCCCTTTTCTTGTGACTATTGTGAATATAAAAGTGTAAAGAAATATAACTTAACTCTACACATAAGGAAACACACTGGAGAAAAACCATACTCATGTAAGATTTGTCAGTATAAATTTTCAAGTAAAGATGGCTTATCTTTACACATGCCAACTCACACTGGGGAGAGAGCTTACGCGTGTCAGCATtgtcattctaaattttcaagGAAAAGTGCTCTGAATATACACATGCGTGTTCACACCGGCGAAAAACCTTATCCTTGTAAATATTGTGACTTACGATTTGCACAAAAAAGTTACCTCAACATTCATACAAGGATTCATACTGGCGAAAAACCCTATTGCTGTAAGCATTGTGAATATAAATGCTCAAGCTCAAGTTCTCTACACAGCCATATGCGTGTACATACTAAACACAAACCTTATTCATGTCAGCACTGTCCAGCAAAATTCGCGCAAAAATGCGGCCTAACGACTCACATGAAAATCCACACTGGGGAGAAACCTCATTCTTGCGAAGCATGTGATTATAAATCTTCATCGAAGACCGCTTTAAAGAATCATATTAAGTGTGTACACAACAAGGAGAAACCTTTTTGCTGTAACTATTGTCAGTATAAATCAGCAAACAAACATTATTTACTGTATCACATAAGGACTCACACTGGAGAGAAACCGTATTCGTGTCAGCTGTGTGACTTTAAAAGTTCTAATAAAAAAAGTGTACAAATTCACAccaggactcacactggcgagaaACCTTATCGTTGTGATGTTTGTCATCATAAATTTGCTACGCATACCAGTATGAAGAGGCATATGACAACGCACACTGGGGAAAAACCTTACACTTGCGATATGTGTCAAAATAAATTTACAAGGAAAAACGATGTTAGAACACACATTATGATGGCTCACGGTGGCAAGAAACCTTATCATTGCAAGGTTTGTCATCATGAGTTTACGACGAATGTAGTTCTAAAGAAGCATATGCTGACTCACACTAGAACAGAATCTTATTTGTGCGATATTTGTCAAAAAACATTTGCAAAGAAAATCGATATAAGAACACATATGAGGACTCATACATTTTAG
Protein Sequence: MKNVTTSKGCNENKNPSFQFISRNTKRKLFVCDICHRTSKIRNNLVEHIMRAHTGEKPYSCAHCQYKCVDKGSLRSHLRTHTGEKSFTCNICNKKFAYKSALVTHTRIHTGEKPYACELCDFETGSNSTIIRHMRSHLVEKRYRCDVCQAQLKTKSTLNRHKRIHTGVKPFSCDYCEYKSVKKYNLTLHIRKHTGEKPYSCKICQYKFSSKDGLSLHMPTHTGERAYACQHCHSKFSRKSALNIHMRVHTGEKPYPCKYCDLRFAQKSYLNIHTRIHTGEKPYCCKHCEYKCSSSSSLHSHMRVHTKHKPYSCQHCPAKFAQKCGLTTHMKIHTGEKPHSCEACDYKSSSKTALKNHIKCVHNKEKPFCCNYCQYKSANKHYLLYHIRTHTGEKPYSCQLCDFKSSNKKSVQIHTRTHTGEKPYRCDVCHHKFATHTSMKRHMTTHTGEKPYTCDMCQNKFTRKNDVRTHIMMAHGGKKPYHCKVCHHEFTTNVVLKKHMLTHTRTESYLCDICQKTFAKKIDIRTHMRTHTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -