Basic Information

Insect: Maniola hyperantus
Gene Symbol: -
Assembly: GCA_902806685.1
Location: NC:5960642-5973545[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 2.2e-05 0.00085 19.2 1.3 1 23 9 31 9 31 0.97

2 25 0.00017 0.0065 16.4 0.5 1 23 37 59 37 59 0.96

3 25 6.8e-06 0.00026 20.8 1.3 1 23 65 87 65 87 0.98

4 25 0.00014 0.0056 16.6 0.2 1 23 93 115 93 115 0.99

5 25 0.00059 0.023 14.7 0.4 1 23 121 143 121 143 0.97

6 25 0.00075 0.029 14.4 8.3 1 23 176 198 176 198 0.97

7 25 0.00034 0.013 15.4 0.9 1 23 225 247 225 247 0.97

8 25 0.0019 0.074 13.1 5.5 1 22 275 296 275 296 0.96

9 25 4.6e-06 0.00018 21.3 0.6 1 23 325 347 325 347 0.98

10 25 0.021 0.8 9.8 5.8 1 23 469 491 469 491 0.98

11 25 0.0015 0.057 13.4 1.6 1 23 497 519 497 519 0.98

12 25 4.5e-05 0.0017 18.2 1.0 2 23 526 547 525 547 0.97

13 25 0.0018 0.069 13.2 0.7 1 23 553 575 553 575 0.98

14 25 0.16 6.2 7.0 7.2 1 21 581 601 581 605 0.91

15 25 0.00019 0.0073 16.3 2.7 2 23 637 658 636 658 0.97

16 25 0.00038 0.015 15.3 5.9 1 23 664 686 664 686 0.98

17 25 0.00032 0.012 15.5 6.3 1 23 692 714 692 714 0.97

18 25 7.9e-06 0.0003 20.6 1.2 1 23 720 742 720 742 0.99

19 25 0.001 0.039 13.9 7.7 1 23 748 770 748 770 0.98

20 25 9.7e-06 0.00037 20.3 0.7 1 23 776 798 776 798 0.99

21 25 4.1e-06 0.00016 21.5 6.4 1 23 804 826 804 826 0.98

22 25 0.068 2.6 8.2 5.0 2 23 832 853 831 853 0.96

23 25 0.0069 0.27 11.3 3.5 1 23 859 881 859 881 0.97

24 25 7.6e-06 0.00029 20.6 1.4 1 23 887 909 887 909 0.97

25 25 0.0071 0.27 11.3 3.9 1 23 915 938 915 938 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	2.2e-05	0.00085	19.2	1.3	1	23	9	31	9	31	0.97
2	25	0.00017	0.0065	16.4	0.5	1	23	37	59	37	59	0.96
3	25	6.8e-06	0.00026	20.8	1.3	1	23	65	87	65	87	0.98
4	25	0.00014	0.0056	16.6	0.2	1	23	93	115	93	115	0.99
5	25	0.00059	0.023	14.7	0.4	1	23	121	143	121	143	0.97
6	25	0.00075	0.029	14.4	8.3	1	23	176	198	176	198	0.97
7	25	0.00034	0.013	15.4	0.9	1	23	225	247	225	247	0.97
8	25	0.0019	0.074	13.1	5.5	1	22	275	296	275	296	0.96
9	25	4.6e-06	0.00018	21.3	0.6	1	23	325	347	325	347	0.98
10	25	0.021	0.8	9.8	5.8	1	23	469	491	469	491	0.98
11	25	0.0015	0.057	13.4	1.6	1	23	497	519	497	519	0.98
12	25	4.5e-05	0.0017	18.2	1.0	2	23	526	547	525	547	0.97
13	25	0.0018	0.069	13.2	0.7	1	23	553	575	553	575	0.98
14	25	0.16	6.2	7.0	7.2	1	21	581	601	581	605	0.91
15	25	0.00019	0.0073	16.3	2.7	2	23	637	658	636	658	0.97
16	25	0.00038	0.015	15.3	5.9	1	23	664	686	664	686	0.98
17	25	0.00032	0.012	15.5	6.3	1	23	692	714	692	714	0.97
18	25	7.9e-06	0.0003	20.6	1.2	1	23	720	742	720	742	0.99
19	25	0.001	0.039	13.9	7.7	1	23	748	770	748	770	0.98
20	25	9.7e-06	0.00037	20.3	0.7	1	23	776	798	776	798	0.99
21	25	4.1e-06	0.00016	21.5	6.4	1	23	804	826	804	826	0.98
22	25	0.068	2.6	8.2	5.0	2	23	832	853	831	853	0.96
23	25	0.0069	0.27	11.3	3.5	1	23	859	881	859	881	0.97
24	25	7.6e-06	0.00029	20.6	1.4	1	23	887	909	887	909	0.97
25	25	0.0071	0.27	11.3	3.9	1	23	915	938	915	938	0.97

Sequence Information

Coding Sequence: ATGCGTCACACTGGTGAAAGGCCATTTGCTTGTGATGTCTGCCATTCGAAGTTTGCACAAAAGAGTTACTTGGCAACACACATGCGCATCCACACTGGAGAGAAACCGTACGCGTGTAACTTCTGTGACGCCACGTTCCGGCAGAGCAACTACTTGAATTATCACATACTCGCTCACACCGGAGAGAAACCTCACGTCTGCAACATCTGTGACGCCAAATTCATTCGAAGATATCGTCTAAAGGCTCACATGAGGATCCACAGCGAGGAGAAACCGTATGTCTGTAATGTATGTCAAGCTAAATTTGCTGTCAAGCAAGATCTAGCCGATCACAGAAGGACTCACGCTAGTGAGAGGTCGTTTGTGTGCAGCATCTGCAGCGAGGGGTTCTCTAGAAAAGAAATGTTGACCTTCCACATGGTGACACACACGGACGCCAAGCTGTTCTGCTGCAACGCCTGTGATTGTGCTTTCCTGCCGAAGAGATATCCGAAGACGCACCGCTGCAGCTCTGCAGAGAAGCGCCACCATTGCAATGTTTGCGACAAGCGGTTCCATCAGAAACGTAGTCTAATCACTCATATGACTACTCATACCGTGCGTCCGTTTAAGTGCGAGTATTTCAAGCAAGATCTAGCTAATCACAGAAAGACGCACGCTAGTAAGAGGTCGTTTGTGTGCAGTATCTGCAGCGAGAGGTTCTCTAGAAAAGAAATGTTGACCTTCCACATGGTGACACACACGGACACCAGGCTGTTCTGCTGCGCTCTCCTGTCGAAGAGATATCCGAAGACGAACCGCAGCAGCGCTGCAGAGAAGCGTCACCATTGCACTATTTGCGACTATCGGTTCCAACAGAAATGTAGTCTAATCACTCACATGCGGACTCAAACCGGAGAGCGTCCGTTTTCGTGCGAGTATTTCAAGCAAGATCTAGCCGATCACAGAAAGACTCACGCTAGTGAGAGGTCGTTTGTGTGCAGCATCTGCAGCGAAAGGTTCACTCGGAAGGGAACGTTGACCCTCCACATGGTGACACACACTGACGCCAAGCTGTTCTGCTGCAACGCCTGTGATTGCGCTCCTCGGGCGGCGGAGCGTCCGCAGCCCCGGCGCTGCACCGCTGCTGAGGGCGCTCCTCGGGCGGCGGAGCGTCCGCAGCCCCGGCGCTGCACCGCTGCTGAGGGCGCTCCTCGGGCGGCGGAGCGTCCGCAGCCCCGGCGCTGCACCGCTGCTGAGGGCGCTCCTCGGGCGGCGGAGCGTCCGCAGCCCCGGCGCTGCACCGCTGCTGAGGGCGCTCCTCGGGCGGCGGAGCGTCCGCAGCCCCGGCGCTGCACCGCTGCTGAGGCCCGTTGCAACATTCCTTACTGCACTTGTACATTCCGAAGCGCCTCCGACAAGAGCTTCTCTTGCGAGCATTGCGAGTACAAATGTAAAACCATGAAGCTGTTAGAACGTCACGCGCAACGTCACACCCGCGACAAGCCATACTCCTGCCATCTATGTCGGGCTTCATACAACGAGGAGGCTCAGTTGACCAAGCATTTGAGTACTCATCCTTGCAAGAGACCAGTCACATGCGATCTGTGTTCCAAGAAATACGAATCAAAGTATTTGTTAACTCTTCATATGAGGAGTCACACGGGTGAGAAGCCCTACTCGTGCGATATGTGCTCGGCGAGATTCACGGCCAAACGCTATTTGAAAGGCCATATGGTTACTCACAGTGAGGATAGACCTTTTTGTTGTAAAGTGTGTTACAAGAGGTTTACAAAAGAAAGTAATCTGACATGTCACATGAGTTTTTACGGACACACGGACGACAGGCCCTTCTGCGGCGAGCTGTGCGCTCCTTTGCCGGAAAAACATGAAAACGAAGTCAGAAGCGCCGCTGACAGTAGGAAACTGAGCTGCAAAGTATGCGACTATACGTGTAAATACAACAGTGTACTAATCACTCACATGAGGAGGCACACGGGGGAAAAACCGTTTTGTTGTGACGTCTGTCGCGCGACGTTCATGAGGAAGGGGAACTTGACGCACCATCGGCGGACGCACTCCGGGGAGAAACCTCACCCGTGTGACGTCTGTCACGtcaacttcaaaaccaaacagCACTTGATTAACCACACGAGGACGCACACTGGCGAGAAGCCCTACCGCTGCAGCGTGTGCCGCGCTCAGTTCGCGTACAAAGACAATTTAACCAACCACCTGAGGACTCACACCGGTGAGAAACCATACATATGCGATCATTGCAACAAGGAACACAGACAAAAACACTCGCTTATAAGACACATGAGAAcgcacactggtgaaaaaccctACAAATGTAACGTTTGTTCAGTGAAATTCGCATTGAAAGGTAATTTAAACGATCACATGAAGACTCACACGGGTGAAAAACCTCATTCCTGTAGCGTGTGTCACAAACGATTTAGACAGAGGAGTCAGTTGAACGGTCACATGAGGACGCACGGTGAGGGGCGCTTGTGTTGCGAGCTCTGTCCGTACAAAACTGTACATTTGAGCTGTTTGGTCGCTCACAGGCGGACTCACACTGGTGAGAAACCGTTTTGTTGCGATGTTTGTGACGCTAAGTTTCATATAAAAACTAGTTTAACTGAGCATATGAAGATTCACAGCGATGAAAGACCTTATGCCTGCGAGCTGTGCGACAAAAGGTTTAGAAAAAGGGGCAATCTAAAGGACCACTCACGGTCGCACAATGAAGAGAGACCCCATCGCTGTGAGCTGTGTCCtaacaaatacaaatataagAATGCATTAAAACGCCATACTATGAAGAGCCATACAGGGAGTCCATTgccgtaa
Protein Sequence: MRHTGERPFACDVCHSKFAQKSYLATHMRIHTGEKPYACNFCDATFRQSNYLNYHILAHTGEKPHVCNICDAKFIRRYRLKAHMRIHSEEKPYVCNVCQAKFAVKQDLADHRRTHASERSFVCSICSEGFSRKEMLTFHMVTHTDAKLFCCNACDCAFLPKRYPKTHRCSSAEKRHHCNVCDKRFHQKRSLITHMTTHTVRPFKCEYFKQDLANHRKTHASKRSFVCSICSERFSRKEMLTFHMVTHTDTRLFCCALLSKRYPKTNRSSAAEKRHHCTICDYRFQQKCSLITHMRTQTGERPFSCEYFKQDLADHRKTHASERSFVCSICSERFTRKGTLTLHMVTHTDAKLFCCNACDCAPRAAERPQPRRCTAAEGAPRAAERPQPRRCTAAEGAPRAAERPQPRRCTAAEGAPRAAERPQPRRCTAAEGAPRAAERPQPRRCTAAEARCNIPYCTCTFRSASDKSFSCEHCEYKCKTMKLLERHAQRHTRDKPYSCHLCRASYNEEAQLTKHLSTHPCKRPVTCDLCSKKYESKYLLTLHMRSHTGEKPYSCDMCSARFTAKRYLKGHMVTHSEDRPFCCKVCYKRFTKESNLTCHMSFYGHTDDRPFCGELCAPLPEKHENEVRSAADSRKLSCKVCDYTCKYNSVLITHMRRHTGEKPFCCDVCRATFMRKGNLTHHRRTHSGEKPHPCDVCHVNFKTKQHLINHTRTHTGEKPYRCSVCRAQFAYKDNLTNHLRTHTGEKPYICDHCNKEHRQKHSLIRHMRTHTGEKPYKCNVCSVKFALKGNLNDHMKTHTGEKPHSCSVCHKRFRQRSQLNGHMRTHGEGRLCCELCPYKTVHLSCLVAHRRTHTGEKPFCCDVCDAKFHIKTSLTEHMKIHSDERPYACELCDKRFRKRGNLKDHSRSHNEERPHRCELCPNKYKYKNALKRHTMKSHTGSPLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -