Mhyp004953.1
Basic Information
- Insect
- Maniola hyperantus
- Gene Symbol
- znf711
- Assembly
- GCA_902806685.1
- Location
- NC:12053092-12063151[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0049 0.19 11.8 1.8 2 23 72 93 71 93 0.96 2 23 0.41 16 5.7 2.3 3 23 101 122 99 122 0.91 3 23 0.00043 0.016 15.1 2.4 2 23 159 180 158 180 0.95 4 23 7.5e-07 2.9e-05 23.8 4.5 1 23 186 208 186 208 0.97 5 23 0.12 4.6 7.4 0.1 2 21 215 234 214 235 0.88 6 23 0.0083 0.32 11.1 0.2 3 23 254 275 253 275 0.93 7 23 4.4e-05 0.0017 18.3 2.7 1 23 622 644 622 644 0.95 8 23 0.00029 0.011 15.7 1.1 1 23 651 674 651 674 0.91 9 23 0.041 1.6 8.9 0.4 1 23 682 705 682 705 0.93 10 23 0.026 1 9.5 4.7 1 23 711 735 711 735 0.98 11 23 2.5e-05 0.00095 19.0 1.8 1 21 741 761 741 762 0.95 12 23 2.5e-05 0.00095 19.0 1.8 1 21 801 821 801 822 0.95 13 23 2.5e-05 0.00095 19.0 1.8 1 21 851 871 851 872 0.95 14 23 2.5e-05 0.00095 19.0 1.8 1 21 901 921 901 922 0.95 15 23 2.5e-05 0.00095 19.0 1.8 1 21 951 971 951 972 0.95 16 23 2.5e-05 0.00095 19.0 1.8 1 21 1001 1021 1001 1022 0.95 17 23 2.5e-05 0.00095 19.0 1.8 1 21 1051 1071 1051 1072 0.95 18 23 0.0036 0.14 12.2 1.3 1 21 1101 1121 1101 1122 0.95 19 23 2.5e-05 0.00095 19.0 1.8 1 21 1151 1171 1151 1172 0.95 20 23 2.5e-05 0.00095 19.0 1.8 1 21 1201 1221 1201 1222 0.95 21 23 2.5e-05 0.00095 19.0 1.8 1 21 1237 1257 1237 1258 0.95 22 23 0.015 0.57 10.3 1.3 1 21 1287 1307 1287 1308 0.95 23 23 2.5e-05 0.00095 19.0 1.8 1 21 1368 1388 1368 1389 0.95
Sequence Information
- Coding Sequence
- ATGGAGCAAAATATGTCTTTTTTTAGTTTGCCCTTTGTTGATTCTGAGTCGTCGGATTTGGTGTTCAATAGAAAGGTGCTAGAGTGTGATTATGAATTCCAAAATGAGTTGCCCTCCCACAATGGGTTATTGGGCTCGGACGATGTTCTTGCGCAGTTCTTGACTGCCGATGGCCCTTTGGAGGAGCCCGACTTAAATGGACCGACAACATTGCACTGTGAGATATGCCAAAAGCGTTTTGATAATGCCAAGAAGTATTATGGACATCTACGAGTACATTCTAAAGATAACCTTTGGATATGtgATAAATGTCCTGACCAGAAGTTTTCCAACAAACAGCAGCTGATGAAGCACTGCCTCACGCACAAGCCCCTGGCGCGCATGTGGAAGTGTCTGCAGTGCTCCATGGCCTTTGAAGCCCTGTGGAGACTGCAGCAACACGTATTCGCTAAACACCTGGATTATAGACCAAACAAGTGTGACCTGTGTGATAAATCTTTTCATAAACTATCAGATTTGAAGAAGCATGAAGATATTCATAATGATATAAGAAGGCACAAGTGCACATTGTGTGACCGAAAGTTCACGGACAAATCCAACCTCAAAAAGCATATGCTGCTGCATTCCAAAATAAAACCCTTTGCCTGCATCGGCTGTCAAGCCAGATTTACTCAGATAGCCTCCCTCAAACGCCACCAACTGAAATGTAATTCTtatattagtcaaaataataatCAAGACACTACTAGAAAAAACTATTGCCGAGTTTGTGGCATATCATTTCAATACAAGAGTGCTTTGCTCGAGCACTATGTAcgACAACACACCATAAATACTGATGGAAGCAAAGAGGATAAACCAATTGAAAGTAATACTGACATAAACAGGACTGAAGACAACATAGTAGATGACATTCTATCAGCAGAGGATGATTATATGACCATGTCCACACAACAAGACATGCTGCACACatacaaccaaacaaacacacacacaagcatgcCCGACACTAACAACTACGATAGTCTCATGCAAATAGAATTCCTTAAAGAAATGAATCAATTACACATACTGGACGATGAACTACTTTATAATGATTTAGACTTCGACAGTCTCCAAAACAGTCATATATTTAACAACCCAAATGAAACTGATTATGGCAACGAAAGAAATAATGAAATCATGTTCGACTTTCATGACGTCGGTAGAAGTGTGGATCAGGATATCATGAATGCATTATATAATGTCAAAGCAGAACATTTACCAGACGAACTATTAAATGTAAATGAGCAACAGATGAATACACCTGAACCAAATGATGATAGACTCCAAACTCCCACAGTATCCGTCAATGAATGCTCAACTATATTCGAAAGCGATGTAGATTTAGAAGAAAGCACCAACTTAGCTGCAAATTTAAACCAATTAATAGGAGAGAACAGTGTTCAGTATATCTCCACGGAAGACGATGATATGTTTATAATTAGTTTGAAGAGTGAAATAGATGCAGAAAAGTTGACAGATATGCTAAACATCAAGGTACAAGCTGCAGATAATGCAGAGATACCAGATTCTGAAGATAACATTGAACTTAATGATAGAAGTAAGAAAATTCTGGACAATATTCAACCTTTCATATTGAGAATACAACCTCAAACATGTTATATGAAACCTACACCATCTGAAACTGAGAAGAATTTCTGTGACATGATTAAAAGTGATTTTAATGTTGAAGCAGACGTTGAAAATGGAAAGTATAAGATAGACAATATAAAAATCGAAAAAGATGATATTAttaaacacaaaaacaaaattgaaattcAAAAAGACAAGACTaaagtaaaaaaacaaaagaatGTCACATTTCTTTGTAATGTATGTAataaagtatttcatagaaaAGAAAACTACAAATCacatatagCGACCCACTCCGCGTCGCTGCGGCGCCACAGCTGCGGCGTGTGCGGCGCGCGCTTCAGCTACCGCTCCACGCTCAACAAGCACCGCGCCGCGCGCCACGAGCCGCGCGTGCGGCGCGCCCACGCATGCGCGCTGTGTCCGCGCACCTTCCCCGCCAACTGGATGCTGAAAACCCACAAGGAGCGTGATCACGATCGGTTGAAGCCCTACGTCTGCGATGAGAAGGATTGCAGTAGAACATTCTATAAGCATTGTGATCTAGTCATACATAAAAGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGCGAAAAGCCGTACTCGTGCGACATCTGCAGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTGGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTGGTTCCCGCACGTGACGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGACGCACACGGGCGAGAAGCCGTACTCGTGCGACATCTGCAGCAAGTCGTTCCCGCACGTGTCGCACCTCAAGCGCCACGAGCGCTCCGTCGACTGCACCACCCGTGAGTTATCCGTTACTGTAATTGGTCGTGTACAGGACGCACACGGGCGAGGAGCCGTACTCGTGCGACATCTGCAGCAAGTCTGTCTGGGGGACCGCATAAACGTTTAA
- Protein Sequence
- MEQNMSFFSLPFVDSESSDLVFNRKVLECDYEFQNELPSHNGLLGSDDVLAQFLTADGPLEEPDLNGPTTLHCEICQKRFDNAKKYYGHLRVHSKDNLWICDKCPDQKFSNKQQLMKHCLTHKPLARMWKCLQCSMAFEALWRLQQHVFAKHLDYRPNKCDLCDKSFHKLSDLKKHEDIHNDIRRHKCTLCDRKFTDKSNLKKHMLLHSKIKPFACIGCQARFTQIASLKRHQLKCNSYISQNNNQDTTRKNYCRVCGISFQYKSALLEHYVRQHTINTDGSKEDKPIESNTDINRTEDNIVDDILSAEDDYMTMSTQQDMLHTYNQTNTHTSMPDTNNYDSLMQIEFLKEMNQLHILDDELLYNDLDFDSLQNSHIFNNPNETDYGNERNNEIMFDFHDVGRSVDQDIMNALYNVKAEHLPDELLNVNEQQMNTPEPNDDRLQTPTVSVNECSTIFESDVDLEESTNLAANLNQLIGENSVQYISTEDDDMFIISLKSEIDAEKLTDMLNIKVQAADNAEIPDSEDNIELNDRSKKILDNIQPFILRIQPQTCYMKPTPSETEKNFCDMIKSDFNVEADVENGKYKIDNIKIEKDDIIKHKNKIEIQKDKTKVKKQKNVTFLCNVCNKVFHRKENYKSHIATHSASLRRHSCGVCGARFSYRSTLNKHRAARHEPRVRRAHACALCPRTFPANWMLKTHKERDHDRLKPYVCDEKDCSRTFYKHCDLVIHKRTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGRKAVLVRHLQTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGTHTGEKPYSCDICSKWFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRETHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGTHTGEKPYSCDICSKWFPHVTHLKRHERSVDCTTRELSVTVIGRVQDAHGREAVLVRHLQQVVPARVAPQAPRALRRLHHPTHTGEKPYSCDICSKSFPHVSHLKRHERSVDCTTRELSVTVIGRVQDAHGRGAVLVRHLQQVCLGDRINV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -