Basic Information

Gene Symbol
-
Assembly
GCA_902806685.1
Location
NC:7774997-7777424[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 4.8 3.1e+03 -2.1 0.0 4 19 163 178 160 181 0.86
2 6 3.3 2.1e+03 -1.6 0.0 22 33 237 248 235 258 0.81
3 6 5.4e-09 3.4e-06 26.6 0.1 1 44 268 313 268 315 0.95
4 6 1.4e-08 8.7e-06 25.3 0.2 3 43 323 367 321 369 0.94
5 6 2.1e-10 1.3e-07 31.1 0.0 1 41 374 414 374 418 0.97
6 6 5e-10 3.2e-07 29.9 0.0 4 45 427 470 425 471 0.96

Sequence Information

Coding Sequence
ATGAGTGATTTGGACGAAAGTGAGCTTGATAGTGACGAAGAAAGCGAATTGCAAGATTTGGAGAAAATTAACATTGCAATAGCAGAATTGGATAATGAGGAACCCAAACCCGGCACGAGTGCTTCCGTATCTCATGGAGCCTCTACATCTGTCGCGAGTATCTGCAGTGTCACTTCGAGTCACGGGGAGTATTCCAAACTATCCAAAGTCGAAACTGCCTTAGCGCTCAATAGAATGTTGGATGAAAAATTACGAAAACTTGAAGCTTTACTGCAATCACGACTGCTCGAGTGCTGCCGAAGATTAGCCAAAGTCAATGAAGTCTGTAAGCCAAACAGGTCAGGCCGAACTAAGTTCAGTTATGGCTCTTTTGGGAAGCCATACTTTAAGGACAGTCGCGGATTCCCCGCCCCTGACAATGAGGATACCATATTGATGAAGGAATCTCAGATGTACGACTTCTCCAACATAGCCTCTGCTGTCGGATGGACTGTGAAGGAGAAGTACCATCTCTCCATGCTCATACACAAGTTGTCAaaagatataaaaaagaaaCGATTAAATTCACAAATACTAGCTTTACAAcgggaaaataaaaaattgaaaacaacAAAGAATAATGAGAAAATATCTGAGCTCAAAAGAGAGATTGCTAATCTCAATAAAGAACCCCTCAAGACATTAGCTCTTCCGATAGATGAAGAGTATGACTGGGATTACATTGCTAACAAGATGAGAAATAGGCACAGCCCTAATGAATATAGAGCTCTATGGAAACTATTTCTACATccatctataaataaaaaagcttggaccAAATCGGAACACCTATCTTTGCAAAAAATTGCCTCCGAAAGGGAGTTGCAAGACTGGGATGCTATAGCTCAGGAGCTAGGCACTGGCAGAACCAACTATCAGTGTTTTGTTTACTTCCGCACTAACATAAACAACACCTTTACAAGTCGAAAATGGACAAGAGAGGAGGAAAAATACCTGTTGCGGTTAATAGACTATTATAGAGAAGAGAACTATATTCCATGGGGAAAAGTTGCAGCCTCAATGGAAAACAGGACAAAAGTACAGGTTTATAACAAGTATGCTCGCCTCTCAGAAGGTAGAAAAGGCAGATTTCTTCCTGAGGAAGATTCTGTTATACTTACTTGCGTCAATAGGTTTGGGCCAAATTACAGAAAGATAACTGAATATCTCCACGGTCGATCTGTAACTCAGTGTCGGGATAGACACCATGTCTTAACCAAAAGAGAATTTTCAGCAGTTTGGACTGTTGGTGAAGATCAGAAATTAGTTCGACTGATGGCCAACCAAAACGCATCCACTAATTTTTCAACTATTGCACAATATTTTCCAGGAAAAAATAGAGTACACATTAGATCGAGATACCTAACTTTACGTAGATGGATGAGAAGAAACCCTAATGTGGATGTCAAGTATGCTCCGAGGCGCGGCCCTAGGCGTTTAGAACATGGAAAGTCTACTGATGATCTCAATAGGGCTATAGAGAATTTGAAAAAACGTTTAGAAGCTGAAGTGATTGATAAGAAGAAGTCAATGATAACAAAAGATTCACCCGAGGAAGTAATAGATGATGCTATAGTAGCCCTCGTTGCTAAAGAAAACGCGAGGAAGATGGAAGCACAAAACTTACTACTAGAGGAACAGGGCACTGAGGTTGTGAGTGGAGGAGAAAACAGGAATTGTGATATTACAGTTCTACGAAAGATACTTATTTTGTTAAAAGCAAAATTGAATaagcaaaagtttaaaaatagtcCACTTCGTAATACATACAGTGGCCTACTAGATCCTGAACCTGGACCGAGCACCGTTCAAGTCAGGTCATATTCAAAGAAAAATGCAGTCAAACATATCCAAATGGCTAAGGTAGACATTTGGGGAAATGCCTTAAAAGGCCAGTTGTCGTATCTACTTCCACCGCATTATGCAACAATCACTGGCTGCAAACAATTAATATTGCATTACATCAACTCTGAAACAGACAGCCAAGAATCAAAACATATGAATGTTCTCATTagaaaaaatatgatgtttagGGAGCAAATCGATCTTTTGATGGAACGTTTTAATTCCTTATTCCTCTGGCCGATGCATCTGTCGAATGTGTCGCCAGAAGATTGTAAGATAACAAATGCAGAAAAGAATCCATCCccatcaccatcaccatcaAAACCTGGcaaaaagtttattatttttcagaaaGAAAACTACGACATTGCACTGCCAATAAATCCTAAATTCCGTAAAATTGATAAAATCGATAGTGAAGATATAGATTTGAAGGAGTCCGAAGATACCCAAACAATTGAGATtgatgaaaattattttgactTCATTCCATAG
Protein Sequence
MSDLDESELDSDEESELQDLEKINIAIAELDNEEPKPGTSASVSHGASTSVASICSVTSSHGEYSKLSKVETALALNRMLDEKLRKLEALLQSRLLECCRRLAKVNEVCKPNRSGRTKFSYGSFGKPYFKDSRGFPAPDNEDTILMKESQMYDFSNIASAVGWTVKEKYHLSMLIHKLSKDIKKKRLNSQILALQRENKKLKTTKNNEKISELKREIANLNKEPLKTLALPIDEEYDWDYIANKMRNRHSPNEYRALWKLFLHPSINKKAWTKSEHLSLQKIASERELQDWDAIAQELGTGRTNYQCFVYFRTNINNTFTSRKWTREEEKYLLRLIDYYREENYIPWGKVAASMENRTKVQVYNKYARLSEGRKGRFLPEEDSVILTCVNRFGPNYRKITEYLHGRSVTQCRDRHHVLTKREFSAVWTVGEDQKLVRLMANQNASTNFSTIAQYFPGKNRVHIRSRYLTLRRWMRRNPNVDVKYAPRRGPRRLEHGKSTDDLNRAIENLKKRLEAEVIDKKKSMITKDSPEEVIDDAIVALVAKENARKMEAQNLLLEEQGTEVVSGGENRNCDITVLRKILILLKAKLNKQKFKNSPLRNTYSGLLDPEPGPSTVQVRSYSKKNAVKHIQMAKVDIWGNALKGQLSYLLPPHYATITGCKQLILHYINSETDSQESKHMNVLIRKNMMFREQIDLLMERFNSLFLWPMHLSNVSPEDCKITNAEKNPSPSPSPSKPGKKFIIFQKENYDIALPINPKFRKIDKIDSEDIDLKESEDTQTIEIDENYFDFIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00953460;
90% Identity
iTF_00953460;
80% Identity
-