Basic Information

Gene Symbol
-
Assembly
GCA_902806685.1
Location
NC:8805186-8807332[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.11 1.8e+02 2.2 0.0 52 86 104 137 94 138 0.82
2 4 0.0027 4.3 7.3 0.0 24 85 170 230 151 232 0.71
3 4 0.0063 10 6.1 0.0 50 83 287 319 275 321 0.82
4 4 0.0059 9.5 6.2 0.0 49 83 387 420 380 423 0.81

Sequence Information

Coding Sequence
ATGGAAATCAATAATCCACAAAGTTATTGGTTTGTCGTTAGAGAAGACCAAAGCAACGTTATATTCAGTAGCAATAATTTTACTATTCAAGCACCACAGGCACAAGTTGCAGCTCAAGAACCACGATATGTTGTAGACAGCTCAGCAGATACTCAACAATATGCTCATAATGCCCAAGTAGACCATATACCAGAACCCCAAGAAGACTCCACCAAGGAAACCAAAGACTTCAACTTCTGGGACAGAAATAGAATTAAGCTATTGCTGTCACTCTGTCTAGAAAACAGATTCAAAAGTCCAAACAAAGACAAAATGATTTGGAATGAAATATCAATCTTATTGGGAACAACTCCCGAAGAGTGTGACAAGAAATATAGAAGCCTCCGTAGAACATACATAAGGCTTTTGAAGAAGAATAGAGCTGGCAAAGAAATAAAATGGGTCCACTACAACATGTGCGATGAAGTTTTTAAAGATTGCAAGTCCCTGTCTATGACCATGCTACCGCCGTGGGAGGACTCCAAAGTTTGCAAACTGTTAACTCTCTACATCGACAACATAAACAGATTCCGGAGCCCAGAACATTTACAAAAAGACATTTGGAAAGACATCGCTACCCAGTTGAACACTACAGAGTATAACTGCTACCACAAGTTTAAGAATATGAAAAGAACTTACTTCAACTGGATTGAGAGAAGTCGAGGAACAGGGAAGGTAAGAAAATGGCCGTACCACTATTACTTTGAACGAATCTATTACAACTACAATCCAGATTTGGGACCTTGGAATAGAAACAAAATAAGACAGCTCATAAATTCTTATTCAGACATCGCTCACAAGTTTAGGAACCCTAAATATCAAAAGAAGGAACTATGGAGAGAAATTTCTAGAAAAGTTGGCGAATCTCCAACAAATTGTGATAGGAAATTTCGTAATCTTAAACAAACCTACTTGAGACTTAAAATGAGAGCTGACACGGGAAGGTCTTTAACGAAATGGAGGTACTTCAAAGACTTTGTTACGATATTCGAAAACGAATCATTTGCAATCGTGGACAACGGACAGGACAATATAGTATATAAGTCTTTAGAACATGATTATATTAAGCAGTTACTGACATTCTATTTAGAGAATAAGCAAAAATTTAACGACCCCCTTGTGAAGAAGAAACAGTTGTGGAGACAGATCGGGCCACAGCTTGGTTTGACGGTGGAAGAATGTGATAAAAAATTTCGTAACATGAAACAAACTTATATAAGATTAGCAGAGAAGAAGCGAGACACAGGAAGGGATAACTCTTGGCCGTACTACTCATATTTTGAAGAAATCTACGATGGGTCCAAGATGTTTACAAAAGAATGCAGCCATAAGTGCAGCATTGATAACACAACTTTTACAGAAATAAGGAATCTTGTTAAGGAGCATGAGACTAAGGACAAAGATAAATTTGAGAGACTTGTCTCAGCGATAGAAGACTCAAATGATATTCAGAGGGAAAGGAATAGAATTTTGCAAGCTTTGTTGAATAGAAAATAA
Protein Sequence
MEINNPQSYWFVVREDQSNVIFSSNNFTIQAPQAQVAAQEPRYVVDSSADTQQYAHNAQVDHIPEPQEDSTKETKDFNFWDRNRIKLLLSLCLENRFKSPNKDKMIWNEISILLGTTPEECDKKYRSLRRTYIRLLKKNRAGKEIKWVHYNMCDEVFKDCKSLSMTMLPPWEDSKVCKLLTLYIDNINRFRSPEHLQKDIWKDIATQLNTTEYNCYHKFKNMKRTYFNWIERSRGTGKVRKWPYHYYFERIYYNYNPDLGPWNRNKIRQLINSYSDIAHKFRNPKYQKKELWREISRKVGESPTNCDRKFRNLKQTYLRLKMRADTGRSLTKWRYFKDFVTIFENESFAIVDNGQDNIVYKSLEHDYIKQLLTFYLENKQKFNDPLVKKKQLWRQIGPQLGLTVEECDKKFRNMKQTYIRLAEKKRDTGRDNSWPYYSYFEEIYDGSKMFTKECSHKCSIDNTTFTEIRNLVKEHETKDKDKFERLVSAIEDSNDIQRERNRILQALLNRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01091480;
90% Identity
iTF_00954196;
80% Identity
-