Basic Information

Gene Symbol
-
Assembly
GCA_002192655.2
Location
NDFZ01004355.1:38023-48152[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.22 21 6.4 0.2 2 21 1818 1837 1817 1838 0.88
2 7 0.00011 0.01 16.8 0.7 2 23 1951 1972 1950 1972 0.95
3 7 0.0012 0.12 13.5 4.0 1 23 1992 2014 1992 2014 0.98
4 7 0.005 0.48 11.6 4.2 1 23 2053 2075 2053 2075 0.98
5 7 0.0094 0.89 10.7 7.0 1 23 2102 2124 2102 2124 0.96
6 7 0.026 2.4 9.3 1.1 1 20 2148 2167 2148 2169 0.94
7 7 0.43 41 5.5 0.5 5 23 2524 2543 2521 2543 0.90

Sequence Information

Coding Sequence
ATGGATAGGTTGAGCCACTTGCGAGGAGAAGCGGGGGGCTCGCGGGACTCCACGCTCGACACCACGTCCCCGCCGAGCGAGTCCTTCATGACAGCCAACGAGAGCTCGTCCAAGTACTTTTCTCTGTCAGAAGTTGACTCTGTTGATTCAACATTCGACATTTCTTCTATAAAAGATGTGTCGCTGGCCAGTACTACCACTGACTCCGAAGGGACCATGACCAACGCCGATGAGCTTATATCGAATCTATCACCAATTGGAAAGAAAAGTGATATGCTAGATAGCTACAAAATTGGTAAACAGATTTCAGCAGCAAACATATTATCAGGCGGTGTTGACATatttgatgataatgatgacaatTCATATGATGGCGATGAGCTGGTGATTGATGACAATGTGGATGATAAGTCTAATTCAGAACTGAAGCAGCCAGAAGAGATGGAGTTTAAGTCTGATGAGAATATGATAGAGTCTACTTTGATAAATGAAGAGATGGACATAGCTAGTAAAGATACAGAAGTGGTGCTACAGATTGATGGTAAAAATGTAGATGCAATAGATATTGGTAATGGATTGTACTTGTATAGGAAGGAAGGTCAGGAGGAGCTGGCCGCTGTTCAGATAATTGAAGATGATCAGCAGCAGACTAGCTTCAAGTTCCTGAAAGTACGTGAAAATGCAGAGGGTAATTTAGAAGTTTATGAAGAAATAGAGATAGAAGTACCTAAAGAAGTGCCTGCAAAAGAAGGGAAGATGGCTGAGAAGAAAATATCATCACATGTGCCTATAAAGGATATCAATAAAGTCATAAGTGAGTCTGCTTGCAACAAAGTTGCTGAAAGAAAAATTAAGCCACCAAGAAAAGATCCAATTTTAACAACTAAAATTACTGAAGTTGAACTTGaagtaaataaagaaacatcACCTGATGGTAAATCTGAAGTCAATATAAATGGAAAAATGATGAAATTCAGTGAATCACGGAAATCTCCAGTTATAGGCAGTTTCACACCCATGACATACCACTCAACACCTAATAAAGAGCCTAGACCATTAACTAAAACCATGGTTGACCAACAGCTGCATCCAAACAGGCATTCAGATAATGTCAAGAAAACAATAGAAGTACATACTGATAGTGGTAAGCAAAGAGTACCTGAAACaccaactaaaaataaagatgGTGATGACAATAAAACTAATGAGATGCCAAGCCCTGAGAAAGTGTTGGTGGTTAATGAATCAGTTGAAAAAGTTACTGTAGCTGAAGAAACTGAGTTGGCGATTGATGAATCAGTTGAAAAAGTTGCTGTAGCTGAAGAAACTGAGTTGGCGATTGATGAATCTGTTGAAAAAGTTACTGTAGCTGAAGAAACTGAGTTGGCGATTGATGAATCTGTTGAAAAAGTTACTGTAGCTGAAGTAAAGAACATTGAAAATGATAAACCAAAATTATTGGAACCAAGTAATGATGAAGTGTTGAAAGAGAAACCGGTTCTCAACGACACTACACTTCCAATTGAACAAGAGAATGTTATTGATTCGActgaaaaagatttaaaaaaagaaaatgcaatagttactgaaaaattacaaaatgcaatTGTAAACGAAGATATTGAAGAAAGTATGGACGAAGACCTTGTTATTGTGGAAACAGATGTCGAAACTGAAGTTGATAAAAGTGAGGCAGAACCTGATGACATCATTAAAGCCGATAAAGTTGAAGGAAAAACGGATGAGCTGATTAAAGCTGATAAAGGTGAGGCTAAAGTTGAGGAGCTTAATAAAGCCGATAAAGGTGAGGCAAACACTGAACAGCTTATTAAAGCCAATAAAAGTGGAGCCATATCTGAAGATTTTGTTACAGCCGAAAAAAGTGTAGCAAAAACTGAAGACCTTGTTGAAGCCAACAACGACAACAAGGCAAAGATGAATGAAGATATTCAAATAAGTCAAACCGAAGTTAAGACTTCTGAGCCTGTTCAAGTTATTAATAAAGATGTTACTGAAGATAATGATAAGGCAATAGTTAAAGACAATACTCAATGTGATAGTCAAGATGAGACCAAAGTTGAAGAAATTATTTACGATATAACAGAAcaagataatgatgatattattattattgatgataGTGAATTAGAAGAAACCAAAATTGCAGAAACTACCTTAGCAACtgataaagaagaaaatattaaaaacaatgatCAAGGAAAAGAAACAgttgaaacaaatatttcaaaaaagaaTGACGGCGaacgaaaaataaaagaggATATTCAGGAGACTAATAAAAAAGATACTGAAGATATTCAAGCCGATTCAACTTCTGTAGTAATTCTTGATACGCACAAAGAACAAATTAAACAACCTGAGACACCTCCCATTGTCGAAATGGtgaaaaataatcaatcaaaaataCCAATTGCTAAATTAGATGCGAAAAAAGAATTAACTAAACCTTCAACTACTTCTAGCAATGAAATTCCCGTACTGAAGTCTTCTACTTCTACACCTGTTGATTTAAAAGTAGGAAAAGTTGCATTGAAACCTGAACCTTCTAAAGAAACAGGCAAAGATGGAAAACTTAATTTGAAATCCGAACTCTCTAGAGCAGCAGGTACTGCTTCGAAACAAGTTGCTAAAGATGTCGTACTGAATAAGGAGCTACCAAAACCAACTAGCACTCCAGAAGAAGTCCAAAAACCAGTAAATACGCACAAAAATCCGCCTAAACCAGAAGTTGTGCCTTTAGCACTTAATAAAACACCGGTTCATATTTCTTTCCTAATTACTAAAACAGAAACAGCAGTACccaagaaagaaaataatgtgCTTGTAAAATCTCCTAAAAAGGAGGGTAAAAAGTCTATTCCAATCGCTGAATCTCAGTCTAATGCAGTACCCATGGAAGTTGACAGTACCACCAATGTCAGAGTAGAAGCTTCTGGAAAATGTTCTCCTATCAGTGGCAAAGCACCTAGCAAGAATGCAAAGGAACAAAAACCGGTTACCCAAGAAGCTTCTGCATCCTCTTCTGAAGTTAAATCTCAAGTGAACACGAAAGAGGATGAAAAGCAGGAAATAAAGATTACACTTAAAGCAAGTACTAATGAAGAAGTGAATGTCAAGgatgtaaaaataattcaagtGCCAAAAGAAGAACAGCCTAGTTGCTCAGGCACTCAAGATGTCAGCAGTACGTCAACAGACAGTCCGAATGAAAGTCGGAATGAAGGAGAAGATGATTCGGAGGAACCTAAGCCAGGCGGAAGTAAAAAAGCAGTACCTTTTGGGAAATGGACAGCTACCAACAGAAAAGAgttcttaaacaaaataaagaatagGAACACGGTCGTCACTCCCGCTGTGCCTTCTACCAGTACCAATCAGCTCAAAAACTCCAACGATCTCAACAGAAGAGATGTTCTACAAAAAATTGACAGCCAAAGGCAGCAATCTAGCAATGCAGCAGCTTTAGCGAAAACACAAGAAGGCAATAAAGCTATTAAGAACGAAGCTGCGTTTGTCAGCAAAACTAGCATTAGTCaaattaaagataataataCTGAAGAATGTGATCTTCCTTCTAAGGTTGAGACAGCTAAAGAAACATCTGAAGCTGAGGCTGAAAACGTTCTCGTAAAGCAAGATGTACCAAACGATATTCAAAATAAAGACATGTCACAAGCGGCAACTACTACTAACTCAAAGAAAGAAGCGCAAATAACGGATATAAATTATCAAGATTTGATTGATAAAACCATTGAAGATATGATACATAGAACAGTAGGGCCTTCAAAACCGGGTCAAGATGAACCCAACCAAAACTCAGCAAAAGATTCGAATGCTCCACCAACGGGTAAATTCCCAGCAAACTACCAACCAACTGATCAAGCCACGCTCGATGAAATAGAAATGAAGATGAATGAATTACACGGTATTCCATTCATCGAAAGACCTCCCCATGAATTACCCGTTGTTCCTTTATCTGAACCTAAAACTAAATCCTTTGCtaaaactgaaaaagaaaagCCTGCTCctataaaaactactaaaattcCTAATCTCTTACCATTCGCAAATAAACCTCAAAAAAAGATTAGCAAGGATAATGTTATAGAGGTTGACTCTGAAGATGAAATAATCGAGCATGAGCCTATTACTGGAGATATTGATATAAGTAAGAAGACTGTAGCAACCAAGCTACCGCCTAAGGAAAAGGCGCTGTCGTATACCAACTCAGACAAATCTAATTCTGATGCTGTTAAAAAAGAATCTATTATCACAGAGAAAGATTTCGACAAATTTGCGAGACGAAATTCTATAACGTATGAAAATTGTCTCACCATGAACTTTGATAGTAAAGAGCCACGCAATGTGGTCCAAACGGTTGCGGAAAAAGATCCGTATCCAAAGACTTACTCCAGAAATGATGTTGCAAGGGTAGATCATAAAAAGATGCCTTTTAAGTATCAAAACGTGCGTCAACCTGTCCAACCGGTTAACGTACAGGCTATAAACAAATTGGCCGCTACTGATGATTCATCTGGCAGAAATCAATCGAAGTTACAAAAGGCTTATCAATCGGCTTTATCAGCCAAACGCCAGAAAGAATGTCCTATTACTATCATTGAAGATAAACCTGTAAAAGTAGTATTTATGGACAACATGGAGTTTGTCCCCAGCTCATTAAATATTCAGGGACAACAACTTTCACCTGTCAAGAAATTAGTCACCGAACCAGACAGCTTCACTCTTAGCACTCTTGATTCTTTAGATTCTGACGTCTTGGATACTACTGATGATGCGAAGTCCCAGgaagaagttaaaataaaaactaagcaTCAGAGAAAACAAGTTCTAACTCCTGTTGACGAACCTGAACTAGAACTGATTGAACCAAAAGATTTAGGCCTTGAAGTGTCACctaaaaagaaaaggaaaatcGATGATGATAAAACAGATAAAAACCTTAAGTATCCTATGCGAAAGAAGTATTATATTCTTGGCTCAAACACAGCAGCGGAGGATAAATATACACATACAACGGAAGTCATTAAAAATCCACTCAAAGAGACGGTGAATCGAAACGACAACGGCGTAGCTCACAAGAATGCTGTCTCAGCTATTGACAGTTTGGTGAAAGCTGCTGAGTTACTTGAACACTCAGAAAACATGAATATTATCGATTCTCCAACTCCTGATGGTCAGCAGAGTACTCCAGTTAAGAGAGGAAGAGGTCGTCCGAGAAAATATCCTCTTCCTGAAGGAGGAGTTGTTGATAAGAACAAAGTGGCAAGTCCGCAAAAGAAGCCACGGTTAATAGATGCCAAAGTCCCAAAACGTGATCCCGTTACAAGTAccgatgaagatgatgatgaggatagCGATGATCAGATCATCAAAGAAAATTGGACGATGggaaaaattaatgaaaacatagtTTGTCCGATCTGTAACAAACTATTCAGAACTGAAAACGTTGTGTTTAAACACGTCAAACATTGCACGGGCCCTTCGCCAAGTCGTTCTGGTTCGGACAAGAGGAGCCCCAGAAGAATGAGACCATCGCAAGAATCAGATTCTAAGTCACAAGGTAGTAAATCTGATGATATGGACCTTGATGATGACAAGCCACTGGTTGTTAGGAAGGAAACTCCTAAGAAGCGTAAATCCAAAGATTCTGTTTCAAAATCGGAAGATAAAGACGATGTCATCGTCATTGAAGATACACCGCCAGTCAAAGAAAAggttgaaaagaaagaaaaagaggttGATGAAAGGAAAATTCACGAATCTAGAAAGCCAAGAGCCAAAATATTCCCTAAAACTAATGATCTGGTTTGCGAGTTCTGCGGCAAAACATTCAGGCAATTATCCTATTTGGTCAGCCACAAATTACAGCACAAGAAAGATGAGCCAAAGAAAGTTGAAAAGGAAGCTCCAGTCATTAACAAGTCGGTGTACAGCTGCGAGGTGTGCAAGAAAGAGTTCAGGAAGCTACACCATCTAGTCCAGCATCGGATTATTCATAACCCTAGCACAGCACCCGTGAGGACTCTACGTAAGAGTTCTTCAGAGCAATCAGACACTAAGATTGAAAAAGAACCGGGTACTTCTAAACTAAGCGAAGACCCGAGCGCTGGTTTCCGCTGCGAGCCATGCGACAAGTCATTCAGAAAACTGCACCATTTAGTGGAGCACAGGGAAACCCACGACGGTATAAACAGACAGAAGACGACGCCAACAGTGGTACCAAATAACGTCGAGAAAGTTGAGAAGCCTGTGACTTTGCATCAGTGCGAGGTTTGCAAGAAAACGTTCAGGAAACTACATCACTTGATCGAACACAAGGAACAACATGTTGAGACCAGCTCAGAAAAGTCTGACGACAAGAGTGTCAAGAGCTCCTTATCAACCAGAGACATAATACATGAGTGTTCACTTTGCTACATGGTGTTCCCTAACGAGCACTCTTTGAACAAACACACGTTCATCTGTCAACGCAAGAAACGGCAGTCCAAGCAAGCCAAGCCTGTCGAAGAATCTGAGGTAACAGCTGAATTAGTTCAAGATGCGAGTGAGAGTCCGAAGATTGCAGAAAAACAGGACGATATTGATTCTCCTAAATTAGTTATTATTGATGATATAAAAGAAGACGAGCACAATACTAAGGTTGTTGAAAATATAGAATTGCCTCAAGAGATACCTAAAGCGGCTGAGGAAAAACCTGTAGAAGTTATCAAAGTGATAGAAAAGGAAATAGAACCTGTTCCTCAAAAAGTAGAAATTAAACCTGTCGAACCACCTGTTACTCCTGCAAAGAGAAATTTCTCAGAAACGGTGGTCGACGAAACACAAGTCATGCCGGAAACcccagaaaaaataaagaaggttGAAATTAAAGATCCCGTTAAAGTTCATGAAACACCTAAGAAGAAAATTTCCAACAAAGAGAAATCTACGAGTAGTGCTAGCAAACGTCTTAAGACTACACCTCCTGTCGCCGTTCCCGAAGACCCTAAACCAGCGGTGGAATCGAGCGATGATGACGAAGTCAGATATATGCTTAACCCGAACTTCAAAGTGGAGGAGCCAGCCGAAGAGAAAGTGTTCATGAAAGTGAGGGCAAACAAGCGCAGCTCTCTCCAAATAGAGCGGCCGAACTCCAAAGACTTAGTGAAGAGAAGAACGTCGTTACAGCACCCGCCCAAAATACCGCGCCTGAAGCCAAAGGCCGTCGAACCGAACCCGGTAGCTGTTAAACAAGTAGCTAAGGCCCCTAAACTAGAACCAATACCTTCAACGGACTCTGACGACAGCGAAACTGTTAAATACTCTTTCCCAAAAACCATTCCTGAAAAAGCAACGAAACCCGCACAAGAGCGCACACCTAAAACTGTAGAAAAGAAAACTCAAAAGCAAACGTTAGCTGATAAGAGAAAGTCTCTGAGTGGCATCGCGAAGAGAAAATCTTTGGGGAAAGCAGCTATCGCCAGGCACAAACCATCGCCCATGAAGCAGATCAAGCGAAGAACGTTGGAGGTGGAGCACCGGTGCGACTGCGGGCAGCTGTTCAGCAGCGCGGCGCTGCTGGCGCGCCACACCACGCTGGCGCACACGCCGCCGCGGATACGGCGCCGCCGCTCGCCGCCGCCCGACCACAAGCCCGACATTAAGCCCAAGCCGCGCAACTCCAGCATCGCCGAAAAATCCAAGCAAGCTCCGGCTAAGAGAAAGTCGAGCGCGCGGAGCGATAGTAGCACCTCTACCAACACAAAACCGAACAAAAGTGAAGCTAAACCTACAAGAAAATCGCTtgacaaagaaacaaaaactccGGCCGCCACGAGGAAACCCAAACCTGAAAAGTCTCAGGCGAAATCTATCGTCAAACCCAAACGGACGCCGGCGCACCGCGGCGTACCCGTACCGGAGAAGATGAGGAaacttatgcaaaaaaataataaataa
Protein Sequence
MDRLSHLRGEAGGSRDSTLDTTSPPSESFMTANESSSKYFSLSEVDSVDSTFDISSIKDVSLASTTTDSEGTMTNADELISNLSPIGKKSDMLDSYKIGKQISAANILSGGVDIFDDNDDNSYDGDELVIDDNVDDKSNSELKQPEEMEFKSDENMIESTLINEEMDIASKDTEVVLQIDGKNVDAIDIGNGLYLYRKEGQEELAAVQIIEDDQQQTSFKFLKVRENAEGNLEVYEEIEIEVPKEVPAKEGKMAEKKISSHVPIKDINKVISESACNKVAERKIKPPRKDPILTTKITEVELEVNKETSPDGKSEVNINGKMMKFSESRKSPVIGSFTPMTYHSTPNKEPRPLTKTMVDQQLHPNRHSDNVKKTIEVHTDSGKQRVPETPTKNKDGDDNKTNEMPSPEKVLVVNESVEKVTVAEETELAIDESVEKVAVAEETELAIDESVEKVTVAEETELAIDESVEKVTVAEVKNIENDKPKLLEPSNDEVLKEKPVLNDTTLPIEQENVIDSTEKDLKKENAIVTEKLQNAIVNEDIEESMDEDLVIVETDVETEVDKSEAEPDDIIKADKVEGKTDELIKADKGEAKVEELNKADKGEANTEQLIKANKSGAISEDFVTAEKSVAKTEDLVEANNDNKAKMNEDIQISQTEVKTSEPVQVINKDVTEDNDKAIVKDNTQCDSQDETKVEEIIYDITEQDNDDIIIIDDSELEETKIAETTLATDKEENIKNNDQGKETVETNISKKNDGERKIKEDIQETNKKDTEDIQADSTSVVILDTHKEQIKQPETPPIVEMVKNNQSKIPIAKLDAKKELTKPSTTSSNEIPVLKSSTSTPVDLKVGKVALKPEPSKETGKDGKLNLKSELSRAAGTASKQVAKDVVLNKELPKPTSTPEEVQKPVNTHKNPPKPEVVPLALNKTPVHISFLITKTETAVPKKENNVLVKSPKKEGKKSIPIAESQSNAVPMEVDSTTNVRVEASGKCSPISGKAPSKNAKEQKPVTQEASASSSEVKSQVNTKEDEKQEIKITLKASTNEEVNVKDVKIIQVPKEEQPSCSGTQDVSSTSTDSPNESRNEGEDDSEEPKPGGSKKAVPFGKWTATNRKEFLNKIKNRNTVVTPAVPSTSTNQLKNSNDLNRRDVLQKIDSQRQQSSNAAALAKTQEGNKAIKNEAAFVSKTSISQIKDNNTEECDLPSKVETAKETSEAEAENVLVKQDVPNDIQNKDMSQAATTTNSKKEAQITDINYQDLIDKTIEDMIHRTVGPSKPGQDEPNQNSAKDSNAPPTGKFPANYQPTDQATLDEIEMKMNELHGIPFIERPPHELPVVPLSEPKTKSFAKTEKEKPAPIKTTKIPNLLPFANKPQKKISKDNVIEVDSEDEIIEHEPITGDIDISKKTVATKLPPKEKALSYTNSDKSNSDAVKKESIITEKDFDKFARRNSITYENCLTMNFDSKEPRNVVQTVAEKDPYPKTYSRNDVARVDHKKMPFKYQNVRQPVQPVNVQAINKLAATDDSSGRNQSKLQKAYQSALSAKRQKECPITIIEDKPVKVVFMDNMEFVPSSLNIQGQQLSPVKKLVTEPDSFTLSTLDSLDSDVLDTTDDAKSQEEVKIKTKHQRKQVLTPVDEPELELIEPKDLGLEVSPKKKRKIDDDKTDKNLKYPMRKKYYILGSNTAAEDKYTHTTEVIKNPLKETVNRNDNGVAHKNAVSAIDSLVKAAELLEHSENMNIIDSPTPDGQQSTPVKRGRGRPRKYPLPEGGVVDKNKVASPQKKPRLIDAKVPKRDPVTSTDEDDDEDSDDQIIKENWTMGKINENIVCPICNKLFRTENVVFKHVKHCTGPSPSRSGSDKRSPRRMRPSQESDSKSQGSKSDDMDLDDDKPLVVRKETPKKRKSKDSVSKSEDKDDVIVIEDTPPVKEKVEKKEKEVDERKIHESRKPRAKIFPKTNDLVCEFCGKTFRQLSYLVSHKLQHKKDEPKKVEKEAPVINKSVYSCEVCKKEFRKLHHLVQHRIIHNPSTAPVRTLRKSSSEQSDTKIEKEPGTSKLSEDPSAGFRCEPCDKSFRKLHHLVEHRETHDGINRQKTTPTVVPNNVEKVEKPVTLHQCEVCKKTFRKLHHLIEHKEQHVETSSEKSDDKSVKSSLSTRDIIHECSLCYMVFPNEHSLNKHTFICQRKKRQSKQAKPVEESEVTAELVQDASESPKIAEKQDDIDSPKLVIIDDIKEDEHNTKVVENIELPQEIPKAAEEKPVEVIKVIEKEIEPVPQKVEIKPVEPPVTPAKRNFSETVVDETQVMPETPEKIKKVEIKDPVKVHETPKKKISNKEKSTSSASKRLKTTPPVAVPEDPKPAVESSDDDEVRYMLNPNFKVEEPAEEKVFMKVRANKRSSLQIERPNSKDLVKRRTSLQHPPKIPRLKPKAVEPNPVAVKQVAKAPKLEPIPSTDSDDSETVKYSFPKTIPEKATKPAQERTPKTVEKKTQKQTLADKRKSLSGIAKRKSLGKAAIARHKPSPMKQIKRRTLEVEHRCDCGQLFSSAALLARHTTLAHTPPRIRRRRSPPPDHKPDIKPKPRNSSIAEKSKQAPAKRKSSARSDSSTSTNTKPNKSEAKPTRKSLDKETKTPAATRKPKPEKSQAKSIVKPKRTPAHRGVPVPEKMRKLMQKNNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00952309;
90% Identity
-
80% Identity
-