Mcon022455.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- -
- Assembly
- GCA_002192655.2
- Location
- NDFZ01083882.1:575-5751[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00018 0.017 16.1 7.8 1 23 20 42 20 42 0.95 2 18 0.00018 0.017 16.1 7.8 1 23 78 100 78 100 0.95 3 18 0.00018 0.017 16.1 7.8 1 23 136 158 136 158 0.95 4 18 0.00018 0.017 16.1 7.8 1 23 194 216 194 216 0.95 5 18 0.00018 0.017 16.1 7.8 1 23 252 274 252 274 0.95 6 18 0.00018 0.017 16.1 7.8 1 23 339 361 339 361 0.95 7 18 0.00018 0.017 16.1 7.8 1 23 397 419 397 419 0.95 8 18 0.00018 0.017 16.1 7.8 1 23 455 477 455 477 0.95 9 18 0.00018 0.017 16.1 7.8 1 23 513 535 513 535 0.95 10 18 0.00018 0.017 16.1 7.8 1 23 571 593 571 593 0.95 11 18 0.00018 0.017 16.1 7.8 1 23 629 651 629 651 0.95 12 18 0.00018 0.017 16.1 7.8 1 23 687 709 687 709 0.95 13 18 0.00018 0.017 16.1 7.8 1 23 745 767 745 767 0.95 14 18 0.00018 0.017 16.1 7.8 1 23 803 825 803 825 0.95 15 18 0.00018 0.017 16.1 7.8 1 23 861 883 861 883 0.95 16 18 0.00018 0.017 16.1 7.8 1 23 919 941 919 941 0.95 17 18 0.00018 0.017 16.1 7.8 1 23 977 999 977 999 0.95 18 18 0.00018 0.017 16.1 7.8 1 23 1064 1086 1064 1086 0.95
Sequence Information
- Coding Sequence
- atgtCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCATGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCATGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCATTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGCAAGGTGAGTGTTGTGTGCCTGCCGCACTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGTGTGTTGTGCCATTGGCAGGACAAAACGATCTGA
- Protein Sequence
- MSVPLRRVQGECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARMRQALLARAFPHAPHAQPRQAAVPLRRVQGECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARMRQALLARAFPHAPHAQPRQAAVPLRRVQGECCVPAALPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSVVCLPHCRTPARSAASASRTRVLCHWQDKTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -