Basic Information

Insect: Mamestra configurata
Gene Symbol: -
Assembly: GCA_002192655.2
Location: NDFZ01004663.1:90375-94526[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.22 21 6.4 2.4 1 23 51 74 51 74 0.94

2 16 0.022 2.1 9.6 0.3 3 23 176 197 174 197 0.91

3 16 0.032 3 9.0 0.2 2 23 223 245 222 245 0.93

4 16 0.00036 0.034 15.2 0.7 2 23 268 289 267 289 0.97

5 16 0.00095 0.09 13.9 0.0 1 23 293 315 293 315 0.98

6 16 0.00013 0.012 16.6 1.3 1 23 320 343 320 343 0.98

7 16 0.00024 0.023 15.7 2.2 1 23 406 429 406 429 0.90

8 16 0.0017 0.16 13.1 0.1 2 23 453 475 452 475 0.97

9 16 0.86 81 4.6 4.9 1 23 496 518 496 518 0.96

10 16 0.084 7.9 7.7 1.5 1 23 522 544 522 544 0.95

11 16 0.14 13 7.0 2.7 1 11 549 559 549 572 0.84

12 16 0.49 46 5.3 1.7 2 23 580 602 579 602 0.90

13 16 0.00049 0.046 14.8 1.3 2 23 610 632 609 632 0.96

14 16 0.0016 0.15 13.2 2.8 1 23 638 660 638 660 0.96

15 16 2.9e-05 0.0028 18.6 4.7 1 23 666 688 666 688 0.99

16 16 2.1e-05 0.002 19.1 0.6 1 23 694 717 694 717 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.22	21	6.4	2.4	1	23	51	74	51	74	0.94
2	16	0.022	2.1	9.6	0.3	3	23	176	197	174	197	0.91
3	16	0.032	3	9.0	0.2	2	23	223	245	222	245	0.93
4	16	0.00036	0.034	15.2	0.7	2	23	268	289	267	289	0.97
5	16	0.00095	0.09	13.9	0.0	1	23	293	315	293	315	0.98
6	16	0.00013	0.012	16.6	1.3	1	23	320	343	320	343	0.98
7	16	0.00024	0.023	15.7	2.2	1	23	406	429	406	429	0.90
8	16	0.0017	0.16	13.1	0.1	2	23	453	475	452	475	0.97
9	16	0.86	81	4.6	4.9	1	23	496	518	496	518	0.96
10	16	0.084	7.9	7.7	1.5	1	23	522	544	522	544	0.95
11	16	0.14	13	7.0	2.7	1	11	549	559	549	572	0.84
12	16	0.49	46	5.3	1.7	2	23	580	602	579	602	0.90
13	16	0.00049	0.046	14.8	1.3	2	23	610	632	609	632	0.96
14	16	0.0016	0.15	13.2	2.8	1	23	638	660	638	660	0.96
15	16	2.9e-05	0.0028	18.6	4.7	1	23	666	688	666	688	0.99
16	16	2.1e-05	0.002	19.1	0.6	1	23	694	717	694	717	0.96

Sequence Information

Coding Sequence: ATGAGTGTAGCGAAAGCAGCAAGTTCATCCTGCAAAACTGAAGCGCTGTCGAAATGGTTAAGTAATGAAGTTTACAAGCATAAATCGaatataacagaaataatgcGTTGGTCTAACGCTACTCCAATTAAACTTTGTGGAGATATGGGTTACATGTGTTGTCACTGTGAAGAGCAATTCCTTGAGCCGGAAGATCTCAAGAAACACACTCTGCAAGTCCATGAGGACGTTTCCAAAGCCTACTTTATAAGGAACATGAGCATGTATCATTACCTCGTCAAATTAGACATCACTGGTCTGCAGtgcaaaatatGTCTCGGACGGGGAACTAGGATTATCAAAATAGAAAAACCGACAAAATCAACCGTTGAATTGAAGTTCATCTCAAAATTGACAACGAGAAACCCAAATGCCATCTTACAAGGGTCAATATCTGAAActgtgaaaaacaaaattaatctaaaaaatatattgctcAACTCTAACGCTAACCCCATAAGATGTAAAGATGGTCATGGATATGGCTGTTCTTTCTGCCCGAAACAGTTTCAGGAGCCAACTGCACTAAAGAAGCACTTTTTAGAAGAACACAACAATGACAAACTGATAAAGTACATGACCTCTAAGCTATTTGAACATGTCATCAAGCTAGATATAACGTACTTGAACTGTGCTCTTTGTGACAAAGACGTCAAACATTTGCAGGACCTTGTTGCACATCTGAAGGACGAACACAACAAGCCGATGTATCTAGACGCCAAAAGCCAAATCGTCCCGTTTAGATTCGAATCGCCCGAACTAAAATGTGCCATATGCTCCACAGAATTCAGTTACTTCAAACTTTTACAGGAGCATATGAATTCACATTTCGGTAATTATATTTGCGAAGTATGTGGAGCAGGATTTGTAACGGACAGACTTCTATTAAACCACGCCAGACGGCATGACAGCGGAGAGTATAAATGTGATCAATGTGACAAAACTTTTATGAACCAGATTAAAATACGCGAGCACATACAGCGAACACATCTGGGTCAAAGTGAACAACGGAACACACCATTAAAAGAAGATAATTTAACAACTGAGGAACCTATAATCAAACCACAATCAAATCCTGAAAAAATGCTGAAAGAAACAAGGAGACGATCCGACGACTTAAAAACGATTCTTCTATATTCGAATGCAAGTTTGATTAGGAATAAGGATAGCGATGGATACTGCTGTAATTTCTGCCCAAAGAAATTTGAAGATCCTAAGAACTTAAAGGAACATTCTTTGGAAGAACATTCTGACATACAAGCTCTACGAATGCCGAAATCTTTCGAATACCTCATAAAAGTTGACATAACTGATTTGAAATGCAAAATTTGCAAGGAAAGTGTTCCGAAATTAGATGATTTTGTCGCACATTTAAAAACTGCTcataataaaaagataactaCAAACATGAGTGAAAtaattccttttaaattcgacAGTGAGGAATTCCATTGCGCTGTATGTGGAACTGAATACTCGACATTCAAAATATTGCAGGAGCACATGCATCATCATTTCAGGAACTATTTATGTGAAGTCTGCAATGCAGGCTTCGTAACACGACGGTTATTAATCTGTCATAAGAGAAGACACGCAAAAGGTGACTTCAAATGCAGTCAATGCGATAAAACGTTCAGTTGCGATCAAAAAAGAAGAGACCACGAACAGAGAGTGCACTTAGGCCTTAAAAAGAGAAACAAATGCAAAGTTTGTGAAGAAAAATTCCAAGACTATTGGGCGAAGATGCATCATATGGTTCAAAAACACGGAGCCCCTCCGATATCGTTAAAATGTAGTGCTTGCGAAAGAATATTTACTAACAGGCGATCGTTATCACGACACGTTAAAAAAGATCACTTGATGGAAAGACAACATGCCTGTACCGTATGCAATATGCAGTTTTTCATGAAACATCTCTTAATAGAACATATGAGAGTACATACAGGGATTAAAAAGTTTCAATGTCAAGTGTGTACGAAGCACTATGCGACTAAAAAGTCCCTGCGACAGCATCTTCGGTCGCATGCTGACGATCGCCGGTTTGTTTGCACGGTGTGTAATTTAGCGTTTGTGCAGAAACGTACGTTGAAAAGTCACATGCAAGCGAAGCATGGGGAGTAG
Protein Sequence: MSVAKAASSSCKTEALSKWLSNEVYKHKSNITEIMRWSNATPIKLCGDMGYMCCHCEEQFLEPEDLKKHTLQVHEDVSKAYFIRNMSMYHYLVKLDITGLQCKICLGRGTRIIKIEKPTKSTVELKFISKLTTRNPNAILQGSISETVKNKINLKNILLNSNANPIRCKDGHGYGCSFCPKQFQEPTALKKHFLEEHNNDKLIKYMTSKLFEHVIKLDITYLNCALCDKDVKHLQDLVAHLKDEHNKPMYLDAKSQIVPFRFESPELKCAICSTEFSYFKLLQEHMNSHFGNYICEVCGAGFVTDRLLLNHARRHDSGEYKCDQCDKTFMNQIKIREHIQRTHLGQSEQRNTPLKEDNLTTEEPIIKPQSNPEKMLKETRRRSDDLKTILLYSNASLIRNKDSDGYCCNFCPKKFEDPKNLKEHSLEEHSDIQALRMPKSFEYLIKVDITDLKCKICKESVPKLDDFVAHLKTAHNKKITTNMSEIIPFKFDSEEFHCAVCGTEYSTFKILQEHMHHHFRNYLCEVCNAGFVTRRLLICHKRRHAKGDFKCSQCDKTFSCDQKRRDHEQRVHLGLKKRNKCKVCEEKFQDYWAKMHHMVQKHGAPPISLKCSACERIFTNRRSLSRHVKKDHLMERQHACTVCNMQFFMKHLLIEHMRVHTGIKKFQCQVCTKHYATKKSLRQHLRSHADDRRFVCTVCNLAFVQKRTLKSHMQAKHGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -