Basic Information

Insect: Mamestra configurata
Gene Symbol: -
Assembly: GCA_002192655.2
Location: NDFZ01005039.1:169235-180987[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.4 38 5.6 0.1 3 23 114 134 112 134 0.94

2 20 0.0097 0.92 10.7 0.2 2 23 138 160 137 160 0.95

3 20 0.55 52 5.2 3.7 2 23 211 233 210 234 0.91

4 20 0.0011 0.1 13.7 0.5 2 23 391 413 390 413 0.95

5 20 0.062 5.9 8.1 0.2 1 20 421 440 421 442 0.94

6 20 0.0068 0.64 11.2 0.6 2 23 452 473 451 473 0.94

7 20 7.3 6.9e+02 1.6 1.5 1 23 489 512 489 512 0.84

8 20 0.0036 0.34 12.0 1.5 1 23 521 544 521 544 0.94

9 20 8.2 7.8e+02 1.5 1.3 8 23 594 610 586 610 0.88

10 20 2 1.9e+02 3.4 0.2 3 23 623 644 622 644 0.83

11 20 2.8 2.6e+02 3.0 1.6 1 23 649 672 649 672 0.91

12 20 6.4e-05 0.006 17.5 1.1 1 23 678 700 678 700 0.97

13 20 0.0014 0.13 13.3 2.0 1 23 707 729 707 729 0.98

14 20 7.7e-05 0.0073 17.3 2.3 1 23 734 756 734 756 0.96

15 20 0.00017 0.016 16.2 2.4 1 23 762 784 762 784 0.98

16 20 1.2e-06 0.00011 23.0 2.2 1 23 790 812 790 812 0.98

17 20 7.4e-05 0.007 17.3 2.4 2 23 819 840 819 840 0.98

18 20 0.00076 0.072 14.2 0.7 2 23 848 870 847 870 0.97

19 20 5.9e-05 0.0056 17.6 1.0 1 23 875 897 875 897 0.98

20 20 0.0016 0.15 13.1 1.3 2 23 904 926 903 926 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.4	38	5.6	0.1	3	23	114	134	112	134	0.94
2	20	0.0097	0.92	10.7	0.2	2	23	138	160	137	160	0.95
3	20	0.55	52	5.2	3.7	2	23	211	233	210	234	0.91
4	20	0.0011	0.1	13.7	0.5	2	23	391	413	390	413	0.95
5	20	0.062	5.9	8.1	0.2	1	20	421	440	421	442	0.94
6	20	0.0068	0.64	11.2	0.6	2	23	452	473	451	473	0.94
7	20	7.3	6.9e+02	1.6	1.5	1	23	489	512	489	512	0.84
8	20	0.0036	0.34	12.0	1.5	1	23	521	544	521	544	0.94
9	20	8.2	7.8e+02	1.5	1.3	8	23	594	610	586	610	0.88
10	20	2	1.9e+02	3.4	0.2	3	23	623	644	622	644	0.83
11	20	2.8	2.6e+02	3.0	1.6	1	23	649	672	649	672	0.91
12	20	6.4e-05	0.006	17.5	1.1	1	23	678	700	678	700	0.97
13	20	0.0014	0.13	13.3	2.0	1	23	707	729	707	729	0.98
14	20	7.7e-05	0.0073	17.3	2.3	1	23	734	756	734	756	0.96
15	20	0.00017	0.016	16.2	2.4	1	23	762	784	762	784	0.98
16	20	1.2e-06	0.00011	23.0	2.2	1	23	790	812	790	812	0.98
17	20	7.4e-05	0.007	17.3	2.4	2	23	819	840	819	840	0.98
18	20	0.00076	0.072	14.2	0.7	2	23	848	870	847	870	0.97
19	20	5.9e-05	0.0056	17.6	1.0	1	23	875	897	875	897	0.98
20	20	0.0016	0.15	13.1	1.3	2	23	904	926	903	926	0.96

Sequence Information

Coding Sequence: ATGTCTTCGGATGAGTCTGATGATGAACCGCTATCCGTTATAGCGGCAAATAAGAAATTAGACTCTGAAGAATATGAGGAGCCATCATCAGATTCTTCGGAGTCGCCAAATAGGAAGAAAAAGAAGTTACCACCACCGAAACGGCTCTCGGTCACAATAAAGCTTCAACGTAAAAAGGCTGCTGAGCAATCATCAGTGAAAGAGCGGCCGGCAGACGTGTGGCTGTACCTAAAGGAACTGAATCCTTCGGGTCCCTACAGCTGTTTACTCTGCACAGACTGGTTCATAAACAGAaccaaaattattattcattatgtCCTAAATCATAAAAAAGACTTTTGTGGTATTTGTAAaTACTTCGTACCTGATAGAGAGGCGTGGGTGAAACATATGGATTTTCATACTCCCTGGCCATGCTCACAATGCGTTGAGAACTTTGACACGGAGACAGAGCTCCGGCTTCACCTAAAGTCTCGTCACAATCTTGTGCATTGCAGACTCTGTCACTTCCGTGTACTTGACGGTGATCTGTATCACTCACACTTGTTCCAAAAACACACTGTCTCTAATGTGTCCAGTAAAGATGAGGAGAGTCTTTGGGAGTTAGAATATGATGGTACTTCCAACTTCCTCTGTTTACTTTGCAACAAATCCAGCAACTCTAATAGAACATTCTTTAATCATTACATGGGGTACCACCACTTCACCATAAAATGCTTTGCTTCTGTGTTGTCAGGTAGAGACATACCATTCTTAGTGTATGGTGCTGATCTCAGAGCTGAATTTGTTGAAGCACAACTAAAACATCATGAAAGATATGGCTATGTTGAATCTGAGTTCAGGCCTGAAGACTGTGTTATAGTAGATGACACAAATCAAACTAGAGATTTACTTAAAGTTCTCATACCAGAAATAAAACCAGAGGGAGAGACCACTGATGAAGCCAAGAATGATGATGGAACTGCAAAGACCAAGGACGAAGAGAATGATGTGTATAAAAGCTACCGTGgtattgatgattttgatgTTACTTTAATGGAGCTGATAGTTGTACAGAAATGTTATCATGATTACATCTCTGACATATTATTAGATATAAATGCTAATTCATTTTTTGAATACTCCGATGTTGACTATGAAAGGCTCACAACAGAAGTAGCCATGGATATAGTTTGTACACTGTGCAGTATCCGATACAGTACTTTGTCAAATTTTGCCAATCACATGTTCAAAATGCATTCCATAAAGTCCTTGCCAATATTCTCATGCCGAGTGTGTGCAACTACTTTTGACACTCAAAATGAGCTAGACAATCATGTATCAAATGAGTTGGGAGAATTTGAGGATCTGTGGATATGTCAGTTCTGTGATAAAGAGTTTGATGACAGGGAGACTACAAGGCGACATCTGACAGAACATTGGGAGCATGTAGAATATGACAACTGTTTCAGCCCACATTTAGGCTTTAAATGCCGGTATTGTCCGACACTGTTTTGGCATGAAACGGACAGAGAGACTCATCAGGTGCGGGCGCATTTCTTCAACCATAAAGATGCATATTATAAGTGTGAGAGTTGCAATGAGATGTTTAGTGATAAGGTCTGGTATGTCCACCACTACATAGAGAAGCACAGCACTCCGGACAAGACAGCGCTGTACCTCCTCAAATGTTCCCTCTGCTGTGTGGTGCTGGCAAGTATCGAGGAGATGAGAGGGCACTTCACCCTTGAACACCCTGAAGCTAGGAAGGTGTTCTGTTCGTTAGACTCCTGTCAGTACAAGCCTTTGAGCCACCGGAAGTCTTTCAAGTTACATGTGCGGACGATGCACACATCTCGCGGGTCTCGTCCGGAGCGCTCGGTGGACTGCGCGGTGTGCGGCCGCGAGTTCGGCAGCTCGCGCGCGTGCGGCGCGCACATGGCGCAGGCGCACGGGCCCGGCAAGTTCAAGTGCAAGATCTGCAGGGAGATCCTGCACACGATGGACGAGAGGAAACTCCACTACCTCATAAGTCACCCAGGCCAGCATCCGTTCGAGTGCGCGGAGTGCGGAAAATCGTTCCAGTACAAGTCCTCGCTGTACATGCACAAGCAGGAACATCTGCCCAACAAGCAGAACTTCACCTGTACCTTCTGTGGGAAGACTTTCCTGAAACGCGACTCCTTCCGGGAACACGTCCAAATCCACGAGGGTCCGCGTCACGCGTGTTCTTACTGCCCGATGCGCTTCGTGCAGCGCTCCAACATGTTACGTCACGAGCGACGTCACACCGGCGAGCGCCCGTACGCCTGCCCGCACTGTTCGCGGAGCTTCGCTGATAAGGGAGCCTGTACTTCACACATCAGGACCCATTTGAAAGATTCGTCGTACGCTTGTGTGTACTGCGGCAAGACATTCGCGCAGAAGTCCAAGCTGAAATATCACACCAGGAAGCATACCGGAGAAAATCTGGAAACGTGCCCGGTATGCTCAAAGTTGTTCACAAGTGCGTGCTCGCTGCGTGAACACATGAAGACTCACGAACCTAAGAAGGAGCTGGTCAAGTGTCCGCTATGTGACCGCAAGTATCAAGATGAGCGCTATATGCTGCGTCACCTGCGTACCTCACACACACGCGCGCGCCATCGCTGTCCCATATGCAACAAGATGTTGACCAGCCCCGTCGGGCTGCGACACCACGTCATCACCCATAGCGCACAAAAGACCATCAGGTGCAATATGTGTCCAAAAGCTTACTCAGTGAAAAGAACAATGATTAAACATTTCCGACGCCGACATGGCTTCAAAGGTACCGAACCAAACATCAAAGAGTTCTACACTAGACTGGACCCTAGGGAATGTAACTTAGGGCTAGACGAGCCGATCATGACCAGTATATTCGGACCTCCACCAAAGAAGCCGAGAGATGAAGTCCTAATAGCAGATTACGTTACTGTAGCTAATATAAACCCAATGCAACCTGTAGAAGGGGATAAAGAAGACAGCCAGAGCACAGAAGATACACAAGACTCGCTGATAGAGAAGTCTCAGTCAGACGATGAACAGTGGACAGAGGGTGACAAGGAGAGTCTTGTAAGAACGGCAAAGCAAATTGTAATAAAGATTGAAGCTAAAGAACCGGCTGAACGCAGCGGGGTGCTGGAACCTACTGACTTTGTGAGCGTTAAGATTGAGCCACTGGATGATGAGCATGCTGGGGAGGAGTCGTAG
Protein Sequence: MSSDESDDEPLSVIAANKKLDSEEYEEPSSDSSESPNRKKKKLPPPKRLSVTIKLQRKKAAEQSSVKERPADVWLYLKELNPSGPYSCLLCTDWFINRTKIIIHYVLNHKKDFCGICKYFVPDREAWVKHMDFHTPWPCSQCVENFDTETELRLHLKSRHNLVHCRLCHFRVLDGDLYHSHLFQKHTVSNVSSKDEESLWELEYDGTSNFLCLLCNKSSNSNRTFFNHYMGYHHFTIKCFASVLSGRDIPFLVYGADLRAEFVEAQLKHHERYGYVESEFRPEDCVIVDDTNQTRDLLKVLIPEIKPEGETTDEAKNDDGTAKTKDEENDVYKSYRGIDDFDVTLMELIVVQKCYHDYISDILLDINANSFFEYSDVDYERLTTEVAMDIVCTLCSIRYSTLSNFANHMFKMHSIKSLPIFSCRVCATTFDTQNELDNHVSNELGEFEDLWICQFCDKEFDDRETTRRHLTEHWEHVEYDNCFSPHLGFKCRYCPTLFWHETDRETHQVRAHFFNHKDAYYKCESCNEMFSDKVWYVHHYIEKHSTPDKTALYLLKCSLCCVVLASIEEMRGHFTLEHPEARKVFCSLDSCQYKPLSHRKSFKLHVRTMHTSRGSRPERSVDCAVCGREFGSSRACGAHMAQAHGPGKFKCKICREILHTMDERKLHYLISHPGQHPFECAECGKSFQYKSSLYMHKQEHLPNKQNFTCTFCGKTFLKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCSRSFADKGACTSHIRTHLKDSSYACVYCGKTFAQKSKLKYHTRKHTGENLETCPVCSKLFTSACSLREHMKTHEPKKELVKCPLCDRKYQDERYMLRHLRTSHTRARHRCPICNKMLTSPVGLRHHVITHSAQKTIRCNMCPKAYSVKRTMIKHFRRRHGFKGTEPNIKEFYTRLDPRECNLGLDEPIMTSIFGPPPKKPRDEVLIADYVTVANINPMQPVEGDKEDSQSTEDTQDSLIEKSQSDDEQWTEGDKESLVRTAKQIVIKIEAKEPAERSGVLEPTDFVSVKIEPLDDEHAGEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00758517;
90% Identity: iTF_00974043;
80% Identity: -