Basic Information

Insect: Mamestra configurata
Gene Symbol: -
Assembly: GCA_002192655.2
Location: NDFZ01005299.1:478964-482921[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.3 3.1e+02 2.7 3.7 1 23 27 49 27 49 0.95

2 14 0.25 24 6.2 0.1 2 23 71 91 71 91 0.96

3 14 6.6e-06 0.00062 20.7 1.2 1 23 97 120 97 120 0.95

4 14 6.3e-07 6e-05 23.9 3.1 1 23 126 148 126 148 0.96

5 14 2.3e-05 0.0022 18.9 0.1 1 23 154 176 154 176 0.98

6 14 5.2e-05 0.0049 17.8 0.1 1 23 181 203 181 203 0.96

7 14 0.00034 0.032 15.3 4.1 5 23 212 230 209 230 0.96

8 14 0.54 51 5.2 2.4 1 23 289 310 289 310 0.90

9 14 0.69 65 4.9 0.9 2 23 509 531 509 531 0.94

10 14 2.3e-07 2.1e-05 25.3 0.8 1 23 537 559 537 559 0.97

11 14 0.00011 0.01 16.8 0.6 1 23 565 587 565 587 0.98

12 14 0.0021 0.19 12.8 2.3 2 23 594 615 593 615 0.97

13 14 0.00027 0.025 15.6 1.6 1 23 621 643 621 643 0.97

14 14 0.00016 0.015 16.3 1.3 1 23 648 671 648 671 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.3	3.1e+02	2.7	3.7	1	23	27	49	27	49	0.95
2	14	0.25	24	6.2	0.1	2	23	71	91	71	91	0.96
3	14	6.6e-06	0.00062	20.7	1.2	1	23	97	120	97	120	0.95
4	14	6.3e-07	6e-05	23.9	3.1	1	23	126	148	126	148	0.96
5	14	2.3e-05	0.0022	18.9	0.1	1	23	154	176	154	176	0.98
6	14	5.2e-05	0.0049	17.8	0.1	1	23	181	203	181	203	0.96
7	14	0.00034	0.032	15.3	4.1	5	23	212	230	209	230	0.96
8	14	0.54	51	5.2	2.4	1	23	289	310	289	310	0.90
9	14	0.69	65	4.9	0.9	2	23	509	531	509	531	0.94
10	14	2.3e-07	2.1e-05	25.3	0.8	1	23	537	559	537	559	0.97
11	14	0.00011	0.01	16.8	0.6	1	23	565	587	565	587	0.98
12	14	0.0021	0.19	12.8	2.3	2	23	594	615	593	615	0.97
13	14	0.00027	0.025	15.6	1.6	1	23	621	643	621	643	0.97
14	14	0.00016	0.015	16.3	1.3	1	23	648	671	648	671	0.96

Sequence Information

Coding Sequence: ATGCGGCGCGACCGGCTGGACGAGGAGACGCGGCGCGAGCTGCGGGAGGTGCAGCACAAGGTGGACAACAGGACGTACTACACGTGCCGGCTCTGCAGCAAGAACCTGAGCTCGGCGCACACGTACCTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCACGAGAATGGGAAGCGATATGCGAAATGTGGCGTGTGTCAGAAGAGCGTGTCTGTGGGGGGGTGGACGCGGCACGTTCGGTCACATCGCGGGGAGAGGCGGCACAGCTGCCACACGTGCGGCCTGGCCTTCAACGACAGCGGCAACCTGGCCAGGCACACCCGGGCGATACACTCGAAACAGCGCCCACACGCCTGCCCCACCTGCCCGAAAACATTCTCACGGAAATCTCACTTAGAAGACCATGTGAAATCTCACTCGGAGAGTCGCACATTCGTGTGTGACGTATGCGGGAAGGGGTCGAAGTCGAGCGCAGCACTACGCATGCACGCGCGCACGCACGACGCGTGCCGGTTCGCGTGCGTGCAGTGCGGCGCGCGCTTCAAGCGGCGCGGCGAGCTGCGCGCGCACGTGTCCGTGCACACCGGCGAGAAGGCGCACGCGTGCCACTGCGGGAAGACGTTCAGGCTGCGGAGTCAGCTCACAGCTCATACCAGAGTGCATCAGAAGACAAGGAATGACGATATAGATTTAAACAATGACACCAGTATACTAGGGTTATGCGACGACGAGATTCAGAACTCCCTGGTGCAGTACCGCGCGTGCGTGTACTGCACCACATCTCACCCCGCGCACTCGTACAGGCAGCACCTGGTGCTGGTGCACGGCGACCTGCTGTTCATCTGCGAGAAGTGCAACGTGTTCGTGGACCGCAAGGACTTCATCTCGCACATGTGCTACCACACACTCCACTACGAAACCGAGGACAGGCTCAATAAGATGCTGCGGAAGAAGAGAGAAGCTGCCAGCGCGCAGCCCCGCCCGGCGCCTCCCGCTCCAGCTCCTGCTCCTGCTACCCAGATCACACCCAAAACACAAAGCAAACCACTCGTTAAAACCGAAGTCAAAAAGCCCGCAGTGACCGCTAAAACAAAAACGAATGTCCAAGTGAATGAGTTCTCAGACCACAGCGATATGGACGACTTCGGACCTCTGCCCGAGTCTGTGTTCGAAGCTATAGAGGACACACAAGACAGCCAACATTTAGAAGATAATACTAACCAAACGTCTGAGAATGAGCGACTCGCTGACGAATCCAATAAATCTTCCCAAcctgaaaatgaaaattcaaGTAATCCTGGCCagtgtttagaaaataataataacttcacAAATAAGTGTTCAGTAGTTATAGAGCCTGTCGATATAGGTAGCTGTACCCTAAGTATGAATTTAGTCAATAAAAATACTAGTAATAAAAGCAACAATGTTGTTCTCCCAGCCACTAAAACTCCGGTAAGACCCCCGACCGGAAAGAGAAACCGGAACAAGTTGCGCAAATGTCCTCTCTGTCTTAAAGAATACCAGGCGTCTTCCAGCTACTTTTATCACCTGAAATTTACCCACAAAATCAGCAAGGAGCACGAGTGTGAGGTGTGCGGCCGGAAGTTCGGAACCAAATCTAACCTGACGCAACACATGGCCGTCCACACTGCGCAGTACGAGTTTGAGTGTAAACAGTGCCCGAAACTGTTCAAGTCTAAAGCTGGTCTGTACATCCACGAGCAGACGCACGGCGGGAACAAGTCGTGGTCGTGCAGCAAGTGCCAGGCGGCCTTCCGCTGGAAGACGCACCTGCTGCGCCACATGAACAGGCATGCGGGAGATAAGGGGCATGTCTGTGACGCGTGCGGCCGCGGGTTCAGTGTGCGCTGCGACCTGCTGCGACACGCACGCACGCACTCCGCGGGCAGCTTCTCCTGCGACATGTGCGGACAGAAGTTCGCTCAGCTGCGCTACTTGAAAGTGCACACCACGAAGCAGCACAAAACAAATGTTAGGAAGTCTAAGTAA
Protein Sequence: MRRDRLDEETRRELREVQHKVDNRTYYTCRLCSKNLSSAHTYLFHKRIHTGERPCVCHVCGKHENGKRYAKCGVCQKSVSVGGWTRHVRSHRGERRHSCHTCGLAFNDSGNLARHTRAIHSKQRPHACPTCPKTFSRKSHLEDHVKSHSESRTFVCDVCGKGSKSSAALRMHARTHDACRFACVQCGARFKRRGELRAHVSVHTGEKAHACHCGKTFRLRSQLTAHTRVHQKTRNDDIDLNNDTSILGLCDDEIQNSLVQYRACVYCTTSHPAHSYRQHLVLVHGDLLFICEKCNVFVDRKDFISHMCYHTLHYETEDRLNKMLRKKREAASAQPRPAPPAPAPAPATQITPKTQSKPLVKTEVKKPAVTAKTKTNVQVNEFSDHSDMDDFGPLPESVFEAIEDTQDSQHLEDNTNQTSENERLADESNKSSQPENENSSNPGQCLENNNNFTNKCSVVIEPVDIGSCTLSMNLVNKNTSNKSNNVVLPATKTPVRPPTGKRNRNKLRKCPLCLKEYQASSSYFYHLKFTHKISKEHECEVCGRKFGTKSNLTQHMAVHTAQYEFECKQCPKLFKSKAGLYIHEQTHGGNKSWSCSKCQAAFRWKTHLLRHMNRHAGDKGHVCDACGRGFSVRCDLLRHARTHSAGSFSCDMCGQKFAQLRYLKVHTTKQHKTNVRKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00952063;
90% Identity: iTF_00952063;
80% Identity: -