Basic Information

Insect: Mamestra configurata
Gene Symbol: -
Assembly: GCA_002192655.2
Location: NDFZ01003319.1:12832-19570[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.029 2.7 9.2 0.1 5 23 346 364 345 364 0.96

2 12 0.01 0.99 10.6 0.2 3 23 372 392 370 392 0.94

3 12 0.88 83 4.5 0.3 2 23 400 421 399 421 0.91

4 12 4.2e-07 4e-05 24.4 1.0 2 23 427 448 427 448 0.98

5 12 0.0024 0.22 12.6 4.3 1 23 454 476 454 476 0.98

6 12 0.00038 0.036 15.1 0.1 1 20 480 499 480 501 0.93

7 12 5.3e-05 0.005 17.8 0.2 1 23 534 557 534 557 0.96

8 12 0.0047 0.44 11.7 0.1 3 23 566 586 565 586 0.99

9 12 2.3e-05 0.0022 18.9 0.4 1 23 597 619 597 619 0.98

10 12 6.3e-05 0.0059 17.6 4.5 1 23 625 647 625 647 0.98

11 12 0.0023 0.22 12.6 0.3 3 23 655 675 653 675 0.98

12 12 5e-06 0.00047 21.0 0.7 1 23 681 704 681 704 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.029	2.7	9.2	0.1	5	23	346	364	345	364	0.96
2	12	0.01	0.99	10.6	0.2	3	23	372	392	370	392	0.94
3	12	0.88	83	4.5	0.3	2	23	400	421	399	421	0.91
4	12	4.2e-07	4e-05	24.4	1.0	2	23	427	448	427	448	0.98
5	12	0.0024	0.22	12.6	4.3	1	23	454	476	454	476	0.98
6	12	0.00038	0.036	15.1	0.1	1	20	480	499	480	501	0.93
7	12	5.3e-05	0.005	17.8	0.2	1	23	534	557	534	557	0.96
8	12	0.0047	0.44	11.7	0.1	3	23	566	586	565	586	0.99
9	12	2.3e-05	0.0022	18.9	0.4	1	23	597	619	597	619	0.98
10	12	6.3e-05	0.0059	17.6	4.5	1	23	625	647	625	647	0.98
11	12	0.0023	0.22	12.6	0.3	3	23	655	675	653	675	0.98
12	12	5e-06	0.00047	21.0	0.7	1	23	681	704	681	704	0.96

Sequence Information

Coding Sequence: ATGGATACGTGGTCCGATCTCTGCCGCTGTTGTTTGTCTGCCAATTCCGAAGTGTCACTCCTAGATGTGGAACAGAATGTAACTGagaagttttatgaaataactacAATCGAGGTCAAAGAAGACGATGGTCTACCGCAGAAGCTGTGCTCAGATTGTTATGCCATCATGAACTCCGCGTACCAGTTCCGAAAACAGTGTATCAAAATGGACAATGAACTACGACTACAGCTCAACACAGTGTTAGATATATCTAAAAGTGAAACCCTCCCTAAATATGATCCCAGCGCTGACGACGACGAATTTGGGAACGATCCCATCAAGCAACTCGAGGCTATCATCAAGCAAGAACCCACGGATAGTGACGATGATTACTACTACgtcttggtcatagatgacCCAAAAGATAAGGATAAAGAAAATCACACAGAATTGGCAAACATCAAAGAAGAGGTTTTTGAAGATGTTGGAACGACTGAGGAGACTACAACTTCGTACACACAGCACCAGACTCAAAGCTCTCAGAGTCAATTTGAAGACTCGATTGAATCTTTCCTCATGTCCAACACCAAAGTCTCGGCTAATGTACCTGCTACGATCCTAGAAAACGAGGAAGAGAGCCAGGAAACTGATGATTTTGAAGGAACAATGAACATAGATGAAACCCAGGACAGTATGTCTCATGAACAGAATTTAGCAGAAATGGAAGAAGGACAAGACGATGAAACCATTGAGAATATTGCTTCTGAAGTTATGAAAGATTCGAAAAactacattaaaattttgacTACAACAGATTCTGATGGCacaattttactgaaaagtaaCGATAGGATCCAATACCTGACAGATTCTCAACTAGTCACAAATGAAGATGAAGACGGAGATGCACTGTCACAAGAAGTGATATTCTGTGAAGGTGATGACTCTCAGTTTCAAATACTGAAATATGACGGTTCAGAATTGGTCATCGAATATGCTGATGATAGCCAAATAGCTACAGTACTCCAACAAGAAGATGGGACATTCTTATGTGATTGTGGAGAGCAATTTGAAGACTTAGCTGATTATGAGAAACATCAGTACAAGCACAACCCTGCTGGGGAACATTTGTGTAACTTATGCGGTAAAGGCTTTGAGTCTGCAGAGATTCTAACAGGACACATGTTACTTCACAGCAGTACAGGGCTTCTAATCACATGTCCGTTCTGTAACCAGCTTATCAGACGCAATGCTTTGACGCAGCACATCAAATACGGTCACAACAACATCAAACCTCGCTGCAATGTCTGTTTCAAGACGTTTGCCAATCCAAACAATTTGAAACGTCACATGATGATCCACAGTGGCATCAGGGAGTTCGAATGTGACATCTGTTTCAAAAGATTCCACCAGAAAATCACAATGCAAACACATAGGTTAACGCACATGAACCCATATGCATGCAACCAGTGTGACCAGTCATTTGAGAATAAAGCTGCATTGGCCAATCACAAAGAATCAGAAGACTGTTCTAAATCAAAAGTGATTAAGGTGAAAGAAGAGTTAATGAAGACTGTCAAGCAAGAGATCACCACGAATCTTGGTAAATTGCTTGGTTATGCTTGCTCTCTTTGCAAGAAGATGTTTTCAGTGGAGTCTGCATTAGAGCAACATATTGAGAGCACACACATAGTTGACCCAACAGAGTTGTTATGTTCGGAGTGCGGTGAAGTGTTACCGTCTAAGAAAGAAATGCAAGGTCACATACTGACACACAAAAACATGAAAGTGAAGAATGCAAAGAGGTTCGAATGTAGTATTTGTGGTAAAGGGTGTTCGAGTCAGGCTATGCTGCTGATGCATGAGCGTGTGCATACAAATGAGAGGCCGTTCCCATGCCAACTGTGTTCTCTACGGTTTAAGACAAAAACTCATCTACGGACTCATCAGCTCACACATACGCGGGAGAAGAAGTTTGGATGCTCAGTTTGTATGAAGTTCTTTGCATTGAAAGGCAATTTGGTTGTTCATCTGCGGACACATACTGGGGAGAGGCCCTATGTGTGCTCAATTTGTGGAGAAGCTTTCATAGACTCGAAATATTTGAAGAAGCATAAACTAAAGAAACATTCTATAGACAATGTGCCCTGGAATCAGTACTAG
Protein Sequence: MDTWSDLCRCCLSANSEVSLLDVEQNVTEKFYEITTIEVKEDDGLPQKLCSDCYAIMNSAYQFRKQCIKMDNELRLQLNTVLDISKSETLPKYDPSADDDEFGNDPIKQLEAIIKQEPTDSDDDYYYVLVIDDPKDKDKENHTELANIKEEVFEDVGTTEETTTSYTQHQTQSSQSQFEDSIESFLMSNTKVSANVPATILENEEESQETDDFEGTMNIDETQDSMSHEQNLAEMEEGQDDETIENIASEVMKDSKNYIKILTTTDSDGTILLKSNDRIQYLTDSQLVTNEDEDGDALSQEVIFCEGDDSQFQILKYDGSELVIEYADDSQIATVLQQEDGTFLCDCGEQFEDLADYEKHQYKHNPAGEHLCNLCGKGFESAEILTGHMLLHSSTGLLITCPFCNQLIRRNALTQHIKYGHNNIKPRCNVCFKTFANPNNLKRHMMIHSGIREFECDICFKRFHQKITMQTHRLTHMNPYACNQCDQSFENKAALANHKESEDCSKSKVIKVKEELMKTVKQEITTNLGKLLGYACSLCKKMFSVESALEQHIESTHIVDPTELLCSECGEVLPSKKEMQGHILTHKNMKVKNAKRFECSICGKGCSSQAMLLMHERVHTNERPFPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSICGEAFIDSKYLKKHKLKKHSIDNVPWNQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00039097;
90% Identity: iTF_00037092;
80% Identity: -