Basic Information

Insect: Mamestra configurata
Gene Symbol: ECU06_1150
Assembly: GCA_002192655.2
Location: NDFZ01005475.1:1055792-1060673[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5e-06 0.00014 22.7 1.7 1 23 17 39 17 39 0.97

2 13 0.00094 0.089 13.9 2.6 1 23 60 82 60 82 0.96

3 13 0.00089 0.084 13.9 0.0 1 23 106 128 106 128 0.93

4 13 7.3e-05 0.0069 17.4 3.0 1 23 240 262 240 262 0.98

5 13 3.1e-06 0.00029 21.7 1.9 1 23 268 290 268 290 0.98

6 13 0.00018 0.017 16.1 2.5 1 23 297 319 297 319 0.97

7 13 1.3e-07 1.2e-05 26.0 1.6 2 23 326 347 325 347 0.98

8 13 0.0001 0.0097 16.9 0.5 1 23 353 375 353 375 0.95

9 13 1.2e-05 0.0011 19.9 0.6 1 23 381 404 381 404 0.94

10 13 0.00032 0.03 15.3 0.9 1 23 410 433 410 433 0.95

11 13 0.00022 0.021 15.8 4.2 1 23 440 463 440 463 0.97

12 13 0.087 8.2 7.7 0.1 2 20 490 508 489 510 0.92

13 13 0.019 1.8 9.7 1.6 2 23 514 535 514 535 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5e-06	0.00014	22.7	1.7	1	23	17	39	17	39	0.97
2	13	0.00094	0.089	13.9	2.6	1	23	60	82	60	82	0.96
3	13	0.00089	0.084	13.9	0.0	1	23	106	128	106	128	0.93
4	13	7.3e-05	0.0069	17.4	3.0	1	23	240	262	240	262	0.98
5	13	3.1e-06	0.00029	21.7	1.9	1	23	268	290	268	290	0.98
6	13	0.00018	0.017	16.1	2.5	1	23	297	319	297	319	0.97
7	13	1.3e-07	1.2e-05	26.0	1.6	2	23	326	347	325	347	0.98
8	13	0.0001	0.0097	16.9	0.5	1	23	353	375	353	375	0.95
9	13	1.2e-05	0.0011	19.9	0.6	1	23	381	404	381	404	0.94
10	13	0.00032	0.03	15.3	0.9	1	23	410	433	410	433	0.95
11	13	0.00022	0.021	15.8	4.2	1	23	440	463	440	463	0.97
12	13	0.087	8.2	7.7	0.1	2	20	490	508	489	510	0.92
13	13	0.019	1.8	9.7	1.6	2	23	514	535	514	535	0.96

Sequence Information

Coding Sequence: ATGAAACAAGGACCAAATTTGCTGGTAAAGCTAGAAAAGCTGAATGTACACAAATGTGAGAAATGCCCAAGAGTCTTCCCAACTTTGAGTGACCTCAAGAAACATATTTCATATCATGATAAACGTTTTTTATCTCATattGTAAGTGCATATGTATCCGTGGTAAGggctaaaatattcaaatgtaaAAAGTGTACCCAAAGCTTCGACAATAATAGGGATTTTATGCTTCATAAGCTTGCCCATGTACAGGCCAAAGTgagaaatgaaagaaaactaAATAAGTTACCCACAAACAGTAACATTGTGAAGCCCTACAAGTGCCCTGATTGCGAAGTCAGTTTCGCTGCACAAAGTACTCTTGACGCACATTCCATTGCCCACTTACCCTTCCCTCACATCTGCAAGTGTGGCATTGGATACTACAAGGAGCAGGACTTGAAATGCCACATCGAATTGGTTCATGACACTGAAACTAAAGCAGATGAAGAGGATCCCCATGGAAAACCGGAAGTTATACTCCAATCAAAGCTTGAATCCAAATCAAGAatcggaaaaaatataaacaaaaaatcaatgaagaaaaaaaaacctaaaaagaaGAACTGTAAAGTAAAGTTGAAGAGTGTAGACGAAGGTACTAACGGCTTTAAGCTAAAATCAGAAGGGGATGTACCAAAACCAGATATAGATATCAGAAAGACTTGCGATAATAAGTTTGAATGTCCAGAATGTAAGAAACTGTTTACTTACAAAAGACATGTTATTCAACATTACAGGATTCACACTGGTGAATGTCCATTTGAATGTCATTTATGTCCAAAGGCGTTCAACCAGCGAATCACACTTAAAAAACACATAGAAAGGCACTTTTCCAAAGAAAGGATCTATGTGTGCAAGCATTGCCCTAAAGCTTTTGCCCACCCGGACTACAGATATCGTCATGAACAAATACACAGCCATGTAAAGCCTAACAAGTGTCCGTACTGCGGCAAGGCATTCCACGATCAGTCTGCCTTGACACGCCACAAGAGAATACACACGGGAGACAAGCCGTATCGCTGCCCTTATTGCCCTAAAGCGTTTAGTGACGCTAGTGGCCACATTGCACATAAGTTACGTCACGAGAACAAAAAACAGTTTCCGTGTGGAATTTGCGATAAGAGATTTTATAACCGATATGATGTAACTAAGCACATGACGGCGATGCACACTAATAAAGAATACTTCATTTGTGACTATTGCAagataggtttttattttaaatataacttaatGATGCATATTTTGCAGAGTCACATGAAGATAAACAAACCCTTCGAATGTGAGTTTTGTCACAACAAGTTTTCACTAAAGGGAAATTTAACCAGACATCTTAGGCAAAAACATGAGAAATACGATTTGAAACCCTCTCATACAATAGGAAATAATGATGCATGCAGTAATAAAAGTTTACAGAAACGTATACAGTGTGCTAAGTGCTCGCAGTATTTTGCAAGTCCAACACTTTTCCAAGAACACAAGCTGGTTGAAAGTGCACAATGTGATATATGTGATAAGAAATTCTTTTGTGAAAATATGCTAGAGGAGCACCTAAGAGCTCATTTCCCCCTGGTGTAA
Protein Sequence: MKQGPNLLVKLEKLNVHKCEKCPRVFPTLSDLKKHISYHDKRFLSHIVSAYVSVVRAKIFKCKKCTQSFDNNRDFMLHKLAHVQAKVRNERKLNKLPTNSNIVKPYKCPDCEVSFAAQSTLDAHSIAHLPFPHICKCGIGYYKEQDLKCHIELVHDTETKADEEDPHGKPEVILQSKLESKSRIGKNINKKSMKKKKPKKKNCKVKLKSVDEGTNGFKLKSEGDVPKPDIDIRKTCDNKFECPECKKLFTYKRHVIQHYRIHTGECPFECHLCPKAFNQRITLKKHIERHFSKERIYVCKHCPKAFAHPDYRYRHEQIHSHVKPNKCPYCGKAFHDQSALTRHKRIHTGDKPYRCPYCPKAFSDASGHIAHKLRHENKKQFPCGICDKRFYNRYDVTKHMTAMHTNKEYFICDYCKIGFYFKYNLMMHILQSHMKINKPFECEFCHNKFSLKGNLTRHLRQKHEKYDLKPSHTIGNNDACSNKSLQKRIQCAKCSQYFASPTLFQEHKLVESAQCDICDKKFFCENMLEEHLRAHFPLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00952057;
90% Identity: iTF_00952057;
80% Identity: -