Mcon002917.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- Smarcc2
- Assembly
- GCA_002192655.2
- Location
- NDFZ01004085.1:44305-51871[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-15 6.7e-12 45.9 0.1 4 44 216 256 213 258 0.95
Sequence Information
- Coding Sequence
- ATGGTTGTCTTATGTTCTAAATATCGTTTCGCACAGGAGATGCTAACTAAAGAAGAGCTGGAAGACAACGTGACGGACCAGACGCACCACATCGTGGTGCCGTCGTACTCGGCCTGGTTCGACTACAACTCGATCCACACCATCGAGAAGCGAGCTCTAACAGAGTTCTTCAACGGAAAGAACAAGTCCAAGACGCCGGAGATTTATCTCGCTTACAGGAACTTCATGATCGACACGTACCGTCTGAACCCAACGGAGTACCTGACGAGCACGGCGTGTCGCCGCAACCTGGCTGGCGATGTGtgcgccatcatgcgcgtgcacGGCTTCCTCGAGCAGTGGGGCCTCATCAACTACCAGTTGGAGGCAGAGTCCCGTCCCACGGCGATGGGTCCGCCGCCCACATCACACTTCCACGTGCTGTCCGACACGCCGTCTGGCCTGCAGCCGCTTGTCACCCGACCCACGCAGCCAAGACCGGCGGAGAACGTGCCAAAGGTTGAGCCTGGTTTACCCAACGGCGCAGAAGCGGGCGCAGGCGCTGCGCCTCCCGTGGCGCCTATCAAGCCTGAACCATCACTGGACCTTGCTGCTGCGTCAGGACTCAAGCTTGACCAGTACCGCGGTGGAGTACGAGGTCGCGGCTGGACAGAACAAGAGACGCTGCTGCTGCTGGAAGCCCTGGAACTGCACCGCGACGACTGGAACCGAGTGGCTGCACACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTATCTGCACGACGCGCAAGCTGGCGGCGTGCTAGGCCCACTAGCCTACCAACCGATTCCGTTCAGCAAGACTGGCAACCCAGTGATGAGCACGGTCGCTTTCCTAGCGTCCGTGGTGGACCCGCGCATCGCCTCCAAGGCCACTAGGGCAGCCATGGAAGAGTTCGCTGCTATCAAGGACGAGGTTCCAGCAGCTATGATGGAAGCTCACGTGAAGGCGGCGGGTGCGCACGGTCCGGCCGCTGCGCTGGCGGCCACGGGCATCGCGGGTACTGCGCCTGAATTATCGCCCACCGCTGAACCTAAAAAGGAGGGCACATCGGATATCAAAGCAGAACCTATGGAAGTGGAGGAGGGCGAGGCCAAGGTGAAGGACGAGCCTGCCGACGTGTCCGCCGCGCCCGAGCCCGACAAGGAGCCCAAGGACGAGCAGCCCGAAAAAACCGAAGCCCCAACGACGGTAGACGCGAAGCTGCAGTCTGCAGCCGCTGCAGCGCtagccgccgccgccgtcaaaGCGAAGCACCTCGCCGGCGTCGAGGAGAGGAAGATCAAGTCACTCGTAGCACTGTTAGTGGAGACGCAGATGAAGAAGCTGGAGATAAAGCTGCGCCACTTCGAGGAGCTGGAGGCCACCATGGAGAGGGAGCGGGAAGGATTGGAGTACCAGCGACAACAGTTGATTCAGGAGCGACAACAGTTCCACCTCGAGCAGTTGAAGGCCGCTGAGTTCCGCGCAAGGCATCAAGCGCATCAAAGGTTTGTGAATCCTTTATAA
- Protein Sequence
- MVVLCSKYRFAQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALTEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAGAAPPVAPIKPEPSLDLAAASGLKLDQYRGGVRGRGWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDAQAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPELSPTAEPKKEGTSDIKAEPMEVEEGEAKVKDEPADVSAAPEPDKEPKDEQPEKTEAPTTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRFVNPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00039756; iTF_00123328;
- 90% Identity
- iTF_00039756; iTF_00123328;
- 80% Identity
- -