Mcon017042.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- -
- Assembly
- GCA_002192655.2
- Location
- NDFZ01005493.1:386948-387363[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-08 3.2e-05 24.1 0.0 3 36 17 50 15 57 0.91
Sequence Information
- Coding Sequence
- ATGCCACGCAACTATTCTAGAAAAACAGACCGACAGGATTGGGATAAAACCTCCATGGAAAAGGCTATTGAAGCTGTAAAGAATAATGAAATGGGCTGGCTATTGGCTTCTAAAGTGTTTAAAGTCCCACAATCGACTCTTAGAAGACATgcactgaaacaaaataaagtctTAGCTCCAACTActaaagGTATGGGTAGGTACAGGAGTGTCTTCACATATGAAATGGAACGAGAACTGGTAGAACATATTAAATTACTAGAAACGAGATTGTTTGGATTCACAAGAAAGGAAGTTTTGGAATTGGCGTNCACTCTCAGTAGTCCAATCTAG
- Protein Sequence
- MPRNYSRKTDRQDWDKTSMEKAIEAVKNNEMGWLLASKVFKVPQSTLRRHALKQNKVLAPTTKGMGRYRSVFTYEMERELVEHIKLLETRLFGFTRKEVLELAXTLSSPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01153872; iTF_00924593; iTF_01156310; iTF_00700053;
- 90% Identity
- iTF_01156310;
- 80% Identity
- iTF_00951774;