Mcon006010.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- -
- Assembly
- GCA_002192655.2
- Location
- NDFZ01003945.1:40611-40943[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-08 3e-05 24.2 0.1 1 39 16 55 16 61 0.90
Sequence Information
- Coding Sequence
- ATGCCACGTAAATACTCCCGAACCTCTTCGCGGGCCACTTCTTATACAAAAGAAGCGCTGCAATTAGCCatgcagaaaataaattataaggagCTCACCTATGCAGCCGCTTCAAAAATGTACGGCATACCTACATCCACACTTAGTGATAGAATCCTGAAGAAAACAGCGATAGTAAGTAATACCCTTGGCAGGCCGACAGCTATCCCAGTGGCATTAGAATCTGAACTGGCAAACTGCCTACGAACACTGGAAAAGTGGGGTTGGGGGTTATCAAGAGAAGAGGTACTCGATGTAActcaagattttataaaaaaaaaaccccttcAATGA
- Protein Sequence
- MPRKYSRTSSRATSYTKEALQLAMQKINYKELTYAAASKMYGIPTSTLSDRILKKTAIVSNTLGRPTAIPVALESELANCLRTLEKWGWGLSREEVLDVTQDFIKKKPLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667344; iTF_00301108; iTF_00407502; iTF_01361558;
- 90% Identity
- -
- 80% Identity
- -