Mcon018740.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- -
- Assembly
- GCA_002192655.2
- Location
- NDFZ01005292.1:437912-440138[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-09 2.2e-06 27.8 0.1 4 39 16 51 15 56 0.92
Sequence Information
- Coding Sequence
- ATGGAACCTCCTGTTAAGAAACGTCGTGCACTTTGGTCAGTCAACCAATTAGCAGCTGCAATGGCAGCCGTGCAAAATGGACTACTATCAGAGCGTGCAGCAGCTATGCAGCACGGGATACCGAGAAGAACCctgaaaaatcatttaaattcagATATTTCCAAAAGAAAAGCTCAGATCTTGAACCCAGCAAGAGCTCAAAAACTCAACAAACCCATAGTCACTCAGCACTTCcaggaaataaagaaaatatataacgAACTGGATATTATAACTCATCCAGAGAGATTATATAATATGGATGAGAAGGGCTGTAGACTCaccatacacaaacagccaatgGTGTTAGCCCAAAAGGGAGCAAAAAGGGTGCATATGGTAGCACCAGAACATGCAGAGAACGTGACAGTGGCCGCATGTGTGAATGCCTTAGGAAACCCTACTCCaccaatgattttatttaaagggAAAAAACTAAAACCTGAGTTTACTGACAACTTACCTGCGGGATCGCTAGTAAAAATGGCTCCAAAAGGTAGTATGACAACTTCTTTGTTTATAGATTTTATACACCATTTAGGAAAGTATAAAACTGGCGAAAAATGTCTGCTTGTTTTTGATGGTGCTTCGTGTCATTTGGACTATCAGATAGTTGAAGCAGCAGACGAGGAAAATATTGTGTTGTACTGCTTGCCTTCGAATACAACACACGAACTACAACCTCTAGACAAAAGTGTGAACAAATCCTTCGAACATCACTGGGATCAAGAaactctattatttttataccaaaatCCCGATAAGAAACTTACTAAAGCACGATTCAACACAATTTTCAGTAGAGTATGGTCAAAGTGCATGACTCATGACAACATCGTCAATGGGTTTAGAGCAACAGGACTTTATCCATATAACCCGGATGCCATACCAGAGGAAGCCTACGCGCCATCTGTATTGACTGAAATATCAGAAAGTTCGTATCGGGCACAATCTTGTACTTCGGATAATAATCTAGCTCAGGAAACATCTCCAATTCCCGGTCCATCTGGCATAAATTCACGGCTGCCTTTAAGAAATTTCTCCGAAAGTAGTTCAGATTCTGACAGAACAAACGTTGAAGATTTGATTATTTCATGTTCAGCTTCACCATCTTTAATGAACCGAACAAATGTAGAAGATTCAATTCCTTCATATCCAGCATCACCATCTTTATTGACAGAAGTAGACCATTCATTGCCGGTTTTATACAACTCTAATACAACGTCGAATCATCGTTTAGTCGATTACAGTTCATCAGATTCAGGCAGTATTATACAAGACCCACCTATTCAATTACAAGAAACAAATACCATTACAAGGCGACCAATTATTTATAGCTCAGATACCGATACTTCTGTTGAAGACCTTATGTCTCTTCTAGCCAATTATCCCAATAGGCAAGATAGCCAAAACTTATACAGCCCCACTCCATCAGAAGACCAAAATGCAGTTCCTCCATTGATGCAAGACTGTACGCCAGAAAAAGGAATCAGCCACGGTAGTTACATACATAATGTGGCAAGGCAACGATCTGATAGTTCATCATCAGAGGACTCGGAGGATAATATACCATTACTGAATCTTAAGCAGAATAAAAGTTTGAAATCTCCTTTCCAACAGCTAATACCAACTCCAAATTATGCGGTGGTGAAGCAAAATAAACCAAGACGGAAAGCTATTAACTACAAAGGTCAGCGGGAGGcaaaaagaacaaagaaaataaaaaaaaacaaggggaTCCCTGATGATACGTGGTATTGCTACGCATGTCATACGGAAAGGATCCAAGATATGCGACAATGTCAAGTGTGTCAGAAATGGTACCACGAACAATGTGTTGGCCTAACGAAAGACGATATCAATTTTGTATGCCCCGAATGCAATTAA
- Protein Sequence
- MEPPVKKRRALWSVNQLAAAMAAVQNGLLSERAAAMQHGIPRRTLKNHLNSDISKRKAQILNPARAQKLNKPIVTQHFQEIKKIYNELDIITHPERLYNMDEKGCRLTIHKQPMVLAQKGAKRVHMVAPEHAENVTVAACVNALGNPTPPMILFKGKKLKPEFTDNLPAGSLVKMAPKGSMTTSLFIDFIHHLGKYKTGEKCLLVFDGASCHLDYQIVEAADEENIVLYCLPSNTTHELQPLDKSVNKSFEHHWDQETLLFLYQNPDKKLTKARFNTIFSRVWSKCMTHDNIVNGFRATGLYPYNPDAIPEEAYAPSVLTEISESSYRAQSCTSDNNLAQETSPIPGPSGINSRLPLRNFSESSSDSDRTNVEDLIISCSASPSLMNRTNVEDSIPSYPASPSLLTEVDHSLPVLYNSNTTSNHRLVDYSSSDSGSIIQDPPIQLQETNTITRRPIIYSSDTDTSVEDLMSLLANYPNRQDSQNLYSPTPSEDQNAVPPLMQDCTPEKGISHGSYIHNVARQRSDSSSSEDSEDNIPLLNLKQNKSLKSPFQQLIPTPNYAVVKQNKPRRKAINYKGQREAKRTKKIKKNKGIPDDTWYCYACHTERIQDMRQCQVCQKWYHEQCVGLTKDDINFVCPECN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00758084;
- 90% Identity
- iTF_00446053; iTF_00446052;
- 80% Identity
- -