Basic Information

Insect: Mamestra configurata
Gene Symbol: Tret1-2
Assembly: GCA_002192655.2
Location: NDFZ01004687.1:105024-114980[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.9e-11 7.3e-09 35.8 0.0 1 38 15 53 15 57 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.9e-11	7.3e-09	35.8	0.0	1	38	15	53	15	57	0.92

Sequence Information

Coding Sequence: ATGCCGCGTAATTATAAAAGGACTACTTCTAGACAAGAATGGGATCCGGATAACATGAAAAAAGCCGTTCAAGCCGTATTTGATGGCACCATAGGTTACTTGAAAGCGGCCAAAACTTTTGAGGTACCAAAATCAACATTACAAGATCGAGTAAACCGATTTAAACAGAACAATGATCTGGACGGTTCCACACGCAAAGGCTTGGGACGATTTAAGCCGATTTTTTCGACTTCCCAAGAACAAAGTCTAGTTGAACATGTCTTGATCATGGAAAAACGATTATTTGGTCTCACGTATAAAGATCTTCGACGCTTAGCGTATCAGTTCGCAGAAGCAAACAGTATTGACCATTGTTTCAATAAGGTTAATAAACTAGCAGGAGAAGATTGGTTAGCTGGGTTCATGAAGCGACACCCACAATTATCACTGCGTGCTGCCGAGCCAACGTCGGTGGCGAGAGCGATGGGATTTAACATGTGTTTCGTGACGATCGGCGTGTGCCTGAATATGGCGGCGCACGGGCTGGTCATGGGCTTCAACGCCATCCTGTTGCCGCAGCTCCGGAAGCCTGATTCCATCATACCTATCGATGACTCTTCTGGATCTTGGATAGCTTCCATCATCGGATTTGCCCTGGTCGCCGGTAACTTCGTCGTGCCTCCCGTCATGGCAAACTACGGCAGAAGAACTGCCAacatcatcagcatcattcCTCTCATCACTGGCTGGTTCTCCATCATCTTGGCCAAAAGTGTTCCTGTCCTACTCGTCGCTAGATTCCTTCAAGGCTTGTCCATGGGCATGAGTGCTTCTCTAGGCCCTGTCTTAATAGGGGAGTATACCAGCCCCCACAATAGAGGAGCATTTTTGACAATGATTTCCTTGTGTATAGCCACGGGAGTGCTAACAGTTCATACTATGGGATCTTATCTACATTGGCAAACGACTGCCTTAGTATGTGCGTGCATTGCCTTCGTTGATCtagtcataattatttactctCCTGAGTCTCCAAGTTGGCTCGCAGATCAAGGAAGGTATGAAGACTGTAAAAGAGTCTTCCGGTGGCTAAGAAATGAGAATGAAGAAGAggaattgcataaaatgatTGAAGCAAGTGCTATAGTCAGAGAATCTAAAGCTGATGCCAATATTTCTCAGAGTTTTGGCAAGAAAGTCAAAAGTGGTATCGTATACTTTAATGCTACTGTAAAAAAGCCAGAGTTCTACAAACCTATCTTTATTATGATGCATATTTATACATTAGGACAATGGGCAGGAGCTAACATTCTAGCTGCATATACCTTAGATATATTCCATCATGTTATTGGCACAGATTTAAACATAGCTCTCTTAGTCATAACTCTTGATGCCCAAAGGATCTTCTCGAATGCTATAGCAGTATTAGTAATAAAGAAGATAAATAGAAGGACGATGCTGTTTGCTACTGTCATCGTTAACATAATTGCGTTCTTGCTGACAGCAGCATACACTTACTGTAAAGGCCAGGGGATGCTGCCTGTCTATCTTGATCACCCGGCTGTTGGTGTGGCGTTGGTCCATCTTCACATGTTCACTATCGCAACTGGAACTGTTCCATTGCCTTTCATCATAGCTGGTGAAGTCTTCCCTCTAGAATACAGAAGTTTGGCTGGAGGAATTAGTGTCCTCTTCCTGTCTTCCAATCTTTTCATTACAGTCAAGACAGTACCATTCTTCTTCGGAACTCTGGGTATTCATGGAGCCTACTGCATCTATGCAGCAGTCGTAGGCTACTGTTTAGTAATAGCATACTTCTTCTTGCCTGAAACGAAGGATAGAACTCTTCAAGATATTGAAGATGAGTTCAGAGGTAGACCGTTATCTCCTGAGGAGGTTAAGTCCACTCAATCATTGACTTCTTGGAAGTTACATAGTAGGGACAGGAGGTGCAGTAGTCcagttgtataa
Protein Sequence: MPRNYKRTTSRQEWDPDNMKKAVQAVFDGTIGYLKAAKTFEVPKSTLQDRVNRFKQNNDLDGSTRKGLGRFKPIFSTSQEQSLVEHVLIMEKRLFGLTYKDLRRLAYQFAEANSIDHCFNKVNKLAGEDWLAGFMKRHPQLSLRAAEPTSVARAMGFNMCFVTIGVCLNMAAHGLVMGFNAILLPQLRKPDSIIPIDDSSGSWIASIIGFALVAGNFVVPPVMANYGRRTANIISIIPLITGWFSIILAKSVPVLLVARFLQGLSMGMSASLGPVLIGEYTSPHNRGAFLTMISLCIATGVLTVHTMGSYLHWQTTALVCACIAFVDLVIIIYSPESPSWLADQGRYEDCKRVFRWLRNENEEEELHKMIEASAIVRESKADANISQSFGKKVKSGIVYFNATVKKPEFYKPIFIMMHIYTLGQWAGANILAAYTLDIFHHVIGTDLNIALLVITLDAQRIFSNAIAVLVIKKINRRTMLFATVIVNIIAFLLTAAYTYCKGQGMLPVYLDHPAVGVALVHLHMFTIATGTVPLPFIIAGEVFPLEYRSLAGGISVLFLSSNLFITVKTVPFFFGTLGIHGAYCIYAAVVGYCLVIAYFFLPETKDRTLQDIEDEFRGRPLSPEEVKSTQSLTSWKLHSRDRRCSSPVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -