Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_002192655.2
Location
NDFZ01005286.1:346466-388275[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-20 1.1e-16 61.5 0.0 2 89 17 101 16 101 0.93
2 2 7.6 2.6e+04 -3.7 0.2 12 33 1010 1030 1006 1033 0.73

Sequence Information

Coding Sequence
ATGGCAAAAGCCCAAATAAATACGAAATCCAGCAACTATGTAAAAGACCGGGATGGTTTTCTCAAGGAATTGAAGCAGTTCAATGAGAGTAAAAAcctACCTACAAAAGTGCCAATAGTGAATGGCATAGAAATAGATCTGTATCTGTTCTACACTTTAGTTCAACAACGAGGGGGAGTTGGAAAGgtAAATCAGAATGACACCTGGGAGACATTCCTGCGGCCACTGAGACTTCCACACCCTTGCATCAATGGATCAACACTGCTCAGAAGAATATATGGGTCATATTTGGAGAAGTATGAGCGAGCAAGAGGACCACCAGGCAGGGACGACGACAATGACATGGACGAAGATCCCCGGCGTGGGCGCGGCGGTGGAATGCCGCGCATGTCTTATGCAGGGGGTGAGGCGCTGCGCACGGGCTCCCGCGTGGCGAACGCGTCGGAGAGACTTGCCCTCTCGCTCTTATCGCCGATGCCGAACGAACAAGACTTCGCTGTCAACGTGTGTACGGTGCTCGCTGCTGATCACTCGAATAGGCTGCCGTTGAGTACTACGCCGCATATTCTGGATTTCTTGCTGGCGCATGCTGGGGTTTATAATCATTCAAGTCTCCGCGACACAATCGGGCGGTCCTACTTCGAAGCGCGCGGTCGTTACCCCGACGACTTCTGGAGCCTTCGGGCCGGCGGGGGCGGGGCTAAGGAGCTCGCCGACGAGACCAAGTTCATGCAGCCCGGGGTGGAACAGCCGGACTTCATCGTGCAGGCAAGGGCGGCGTACAATACGCTCACTGATGTGCTGCTGAATGGGGCCGAGGAAGAAGAGGTGGTCGTCGAAAAGGTTTATGAAGATGATTTATTAGAAGACTGGGTAACGGAACCGTCCGAGGAGAGCCAACTGTTCGCCCCCGAGCTGCCAGGGGGCGCCACTTGTGTGTACTCGCAGCGAGTGCTGCAGATCGCCTCCATCGTGCGCTCGCTCTCCTTTCACGACGAAAACGTGCAGTACTTAGCTAAGAATACTACGCTTATCAGatttTTATTGCTGTGTGCAAACTCTTGGGTCGGTACGTTACGGCAATCAGGTCTTGATACATTAGGAAACGTATCTACTGAACTTGTAatcaagGACCCAGCAACATGTTTGATATCCCGCCATGTGCTATCAACGATTCAGTCAGCGTTAGTATCTGAGGACCGCGCTAGAGTGCTTGCAGCGCTCGAGCTGCTGAACAAACTCGCTCAGAACGAGGTCAATGAAGACGCACTGCTTAAAGCACTGGAAGCTAAGTTGTACCACGAAGTCTGTGCCCTGCTGACCCTCCGCGACATAATGGTGCTAGTGTGCACGTTGGAATGTGTGTACGCGCTGACGTCACTAGGCGACCGCGCCAGCGAGAGTGTCGCGAGGGTGCCCGGACTTATACACACACTCGTCTCGCTCGTCACTGTCGAGGCTCAAAGCTACGGTCCCCGTGCTTGCATCCTCATGCGCGTGGTTGAGACGGTGAGTGGACCTAGTGCTGTCGCCGCGCAAGCTGAACGGGATGCGCAAGAAAGGCAAACTCAGCAACAGCAAGTGACTACAGCAACCCCCACAAAGGTCATACAAGAGCCTGCGCAGACGACGCCGGCGACGGCCACCACCGCGCAAGTGTCGTCGCTGGCGCCCGTCTCGACTATACAGCAGTCACATCTGCAACAGCGGACCGTTCAGGAAAACGAACACTTCGCTCAAGCCTGGCTGCGCTCGACCTACGAAGTCCTGCCGGCGAACGACAACAGCGCATGCGACGCCAACGACATGTACCGTCAGTATGTGGCGTGCTGCACCAAACTGTCCAGGAAGGGAGTCATCGCGCCTGCACACTTCCCTAGACTAGTCAGAACGGTTTTCGGAGGTACAGTGGGGCCAAACACAGTGACGTTATCGACGGGGGAGACTCAACAAGCGTACATCGGCATCAGATCCAGAGCGATGCAGAATAGGACTAATCCTACTGCAGgACCTTCTTCACCGATACTGAAAGCGCAGCTAACGAATAAGGCGGCAGCTGAAGCGAAACCAGTTGTGACTCAACCACAAGTACAGGCCCAACAACCACCCGCTTCGCACCCGCACATCTCTCAAGCTCTAGAGTCCAGCCCGTCGAACACGACGCTCATCAAGCACTTGTTAGCGCACAAAGTAAGCCCCGCTCTGCCCACGCCGCAAGTTATGGACGTTGACCCAGAAGCCTTGATCAAGTGTACGACGATTACGCCCGGTGGTGTTGCCAGTAGTACGCCGACTGATAAGAAATCCGCCCAAAATAAAATGCTAGCAGACTTACTAAAGAAAAACTCGAACCCTCCTTTACAAGTCGTTCAAATGGGTCCTCAAATCAACGCGCCAACCATTCAAATCACAGAAACGGGTCAAATCGTTCAGGTCAAATCCGACCCGACACCAGTCATACAAATAAATGACTCAAGCCTAGTATCACAAGGAAACCagtactttcaaataaaaaacgaacAAGGTCAACTCATTCAAATAAAGAACGAGCAGGGTCAAATCATTCAGTTGAAGAGTGACCAATTACAAGCGCCGATTCTTCAGTTCAAGAATGAACATGGTCAGCTGGTTCAGGTGAAGAGTGAAGGACCAATTCAGATCAAAACTGATAAGGATGTGACTGAAACTGTGGTTGCGGATCATTCGTTTACTGAGCCGCCTACTAAGAAAATTAAGGTGGAAGAGAAGaacatgGCACCTCAAGAAAGCGTGTCAAAAACAGCAGCAAATTTGTATGCAGCGCTCGCGGCCTCAGCATTAGAAGATGAAGAGGATTTGTTGCCACCGAAACAAGAACCAGTTGAAATTGTTCAACCATCGGTTTTGATGGCAGCTGGTGAAAATTCTGTCATCATTCAAGAGCCCATTCTTCAGGTGCAACAACCAACCATGTCGGTGCAACAGCCTGCAATGCAAGTACAACAGCCGACTCTACAGGTCCAACAACCTACTTTACAAGTTCAGGCACCTATGCAgCAGCAGACGTTACAAATGCAACCACCAATGCTACAAGTGCAACCCATGGACGTTCAAAACATCATTGCTTCACAGTCCGGGCAGCTTATACTGCaagAGAAAACAATATCGACACAACCCACGCAATATATGCAGCAGCCAATGCAGATCATAGCTACGCCGAGCAATGCTCAAGGTGGGATTAGTTACATCGCCCAGAATATCCCGGGGAATATGATGCAAAAAACTATTATCATAGTTCAAGGACCAACCGGTGGAGGACCTCTAACTTTGACGAACGCCCCTCAAATAACGCCAAGCCAGCAACCGATAATAACCAACCAGCCACAGCCGCATAAGGCTCAGATTATGAACCAACAGCAACCACAACAGATAATGGTTTCTCAAAAGCAACCGCCTGCGCTTATTAGTACGTCGACTAGCAGTCAGATTGTGACCAGTACTGCGCAGCTTATACAagGAAACCAACAACTCCTCCAAGGAAACCAGCAAATAATAGCCGTGTCCAACAACCAGCCGATCATAATGACCGCGCCAATGAAGAGCAACGTACACAGAGTGGTTCAGGCACCTCAGAGAAGCCCCGTGGTTACCAGCGTGCAGAGCAACCAGGTGTCTGTTGTTAGCGAAGCGAAAACCAGCGTTATACAGAGTTGTCCGAAGGCCTCAACACAACCGGTGATGCGACAAGTGATCACCCGCCAACCTGTGATGGTAGGCAACACTAAGATCGGTGATAAAGAACTCGTCGTCAACCAGCCTGTGGTTACCGAGCCGCCAAAACCGCCTACGCCGAAGCCGTCTGCCACGCCGCCGCCCGCGCTCACCCCAACACCCGTGCAGGCCACGAGTCCACAGGACGAGACGCCTTGGAAATGTCACTGGAGGGGGTGCGCCAAAACATTCACGACCGCAGCGGACGTATTCACACACGCTGCGCGCACGCACTGTCCGCCGTCCGCGGGCGGCGAGGCGCCGTGCATGTGGCTGGACTGCGACCGCGTGCCGCGCAAGACCTTCGCGCTGCTCAACCACCTCACCGACAAGCACTGTACTCCGCAAGCATTGAAAGCGGTGTACAACTCGCGGCGCCACGCGGCCGCTGAAGGCACGGACGGTAAGCCGGTGACGCTCGGATACCCTCCGAACGCTGCGCTAGCCGCACTTAACAAACATGCCGCCGACATGTTCAACCCCCGGGAGCTTATGGTAAGAGACGAGAACGAGGGTCCAGTAACGAAGAGCATACGGCTGACGGCAGCACTGATATTGAGGAATATTGTCATCTACTCCAATACGGGGCGGAGACAACTCCGATCGTACGAGGCTCATCTAGCAACGATCGCGCTGAGCAGCGTAGAAGCATCCCGGACCATCGCCCAAGTGCTATACGACATGAACAACATTTGA
Protein Sequence
MAKAQINTKSSNYVKDRDGFLKELKQFNESKNLPTKVPIVNGIEIDLYLFYTLVQQRGGVGKVNQNDTWETFLRPLRLPHPCINGSTLLRRIYGSYLEKYERARGPPGRDDDNDMDEDPRRGRGGGMPRMSYAGGEALRTGSRVANASERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRDTIGRSYFEARGRYPDDFWSLRAGGGGAKELADETKFMQPGVEQPDFIVQARAAYNTLTDVLLNGAEEEEVVVEKVYEDDLLEDWVTEPSEESQLFAPELPGGATCVYSQRVLQIASIVRSLSFHDENVQYLAKNTTLIRFLLLCANSWVGTLRQSGLDTLGNVSTELVIKDPATCLISRHVLSTIQSALVSEDRARVLAALELLNKLAQNEVNEDALLKALEAKLYHEVCALLTLRDIMVLVCTLECVYALTSLGDRASESVARVPGLIHTLVSLVTVEAQSYGPRACILMRVVETVSGPSAVAAQAERDAQERQTQQQQVTTATPTKVIQEPAQTTPATATTAQVSSLAPVSTIQQSHLQQRTVQENEHFAQAWLRSTYEVLPANDNSACDANDMYRQYVACCTKLSRKGVIAPAHFPRLVRTVFGGTVGPNTVTLSTGETQQAYIGIRSRAMQNRTNPTAGPSSPILKAQLTNKAAAEAKPVVTQPQVQAQQPPASHPHISQALESSPSNTTLIKHLLAHKVSPALPTPQVMDVDPEALIKCTTITPGGVASSTPTDKKSAQNKMLADLLKKNSNPPLQVVQMGPQINAPTIQITETGQIVQVKSDPTPVIQINDSSLVSQGNQYFQIKNEQGQLIQIKNEQGQIIQLKSDQLQAPILQFKNEHGQLVQVKSEGPIQIKTDKDVTETVVADHSFTEPPTKKIKVEEKNMAPQESVSKTAANLYAALAASALEDEEDLLPPKQEPVEIVQPSVLMAAGENSVIIQEPILQVQQPTMSVQQPAMQVQQPTLQVQQPTLQVQAPMQQQTLQMQPPMLQVQPMDVQNIIASQSGQLILQEKTISTQPTQYMQQPMQIIATPSNAQGGISYIAQNIPGNMMQKTIIIVQGPTGGGPLTLTNAPQITPSQQPIITNQPQPHKAQIMNQQQPQQIMVSQKQPPALISTSTSSQIVTSTAQLIQGNQQLLQGNQQIIAVSNNQPIIMTAPMKSNVHRVVQAPQRSPVVTSVQSNQVSVVSEAKTSVIQSCPKASTQPVMRQVITRQPVMVGNTKIGDKELVVNQPVVTEPPKPPTPKPSATPPPALTPTPVQATSPQDETPWKCHWRGCAKTFTTAADVFTHAARTHCPPSAGGEAPCMWLDCDRVPRKTFALLNHLTDKHCTPQALKAVYNSRRHAAAEGTDGKPVTLGYPPNAALAALNKHAADMFNPRELMVRDENEGPVTKSIRLTAALILRNIVIYSNTGRRQLRSYEAHLATIALSSVEASRTIAQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00017962;
90% Identity
iTF_01030915;
80% Identity
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