Mbra016422.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mamestra brassicae
Gene Symbol
nfxl1
Assembly
GCA_905163435.1
Location
LR991002.1:16359176-16361656[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.011 1.6e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 19 3.1e-07 0.0047 17.6 15.9 3 19 186 202 185 202 0.95
4 19 1.6 2.4e+04 -3.8 0.6 6 10 227 231 226 231 0.78
5 19 1.4e-07 0.0021 18.8 10.8 3 19 239 255 237 255 0.92
6 19 1.7 2.6e+04 -3.9 1.9 6 10 280 284 279 284 0.83
7 19 1.6e-09 2.5e-05 24.9 12.5 1 19 290 308 290 308 0.99
8 19 7.9e-06 0.12 13.2 19.8 3 19 345 361 337 361 0.86
9 19 1.2 1.9e+04 -3.4 0.4 7 11 365 369 365 369 0.84
10 19 2 3e+04 -5.3 2.2 5 10 384 389 384 389 0.88
11 19 6.7e-05 1 10.2 20.3 1 18 395 412 395 413 0.97
12 19 4.5e-10 6.8e-06 26.7 14.0 1 19 422 440 422 440 0.99
13 19 0.0016 24 5.8 8.8 10 19 489 498 486 498 0.91
14 19 0.0043 66 4.4 6.9 1 12 508 518 508 518 0.90
15 19 0.35 5.3e+03 -1.7 3.6 14 18 547 551 547 552 0.87
16 19 0.12 1.8e+03 -0.2 0.5 7 12 567 572 567 579 0.83
17 19 5.3e-06 0.081 13.7 4.8 1 11 588 598 588 599 0.97
18 19 0.00025 3.7 8.4 14.0 4 18 630 645 628 646 0.85
19 19 4.2e-06 0.063 14.0 12.0 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCGCGCCGATACAGAGACGCCGCTGCAAAATTGCAGCAAAATGTCCAGAAACATCTAAAAGAAATGAAGGAACTGTCGTCGTCTGAAGATGAGGATCCTTGCGAGTCCAGCGTCTTGGAAACCATGTTCCAGAGCTACTGGCGAGGCGGCGGAGACACTCACATGCTAAATAGGACCAAAAATCTCCTAGAAGAAGCCATAAGCGGCCGCTCTGTTACGTGTCTTATATGCATATCATCGATAAAAAAATCTCACGCTATTTGGACTTGTGATCATTGTTTTGCCTACTTCCATCTCTCTTGCATTCAAAAATGGTCGAATGACAGTATAAGCTTGCGTAGTGAAGAAAGTACGGGCCCGTTAGCTGTGATAAAACAACAGAAAATCGAATGGTGTTGCCCTAAGTGTAGAAATTCGTATTCTAAGGAAGAAATACCTCGTAAATATCGTTGTTTCTGCGGTAAGACTGATGACCCGCCTCATCATCCTTGGCTCATTCCTCATACTTGTGGTGAAGTCTGTGGAAAGAGGTTGTCTACTGGTGATAATTGTAAACACAAGTGCTTGCTTCTATGCCATCCTGGTCCCTGCCCTCCGTGTCCTCAAACTGTTAACGGGATATGTTTTTGTAAGAAAGAACGTAAGAGAGTGAGATGCAGTGCCGCTACATGGTCATGTGGCCAGGTTTGTAAGAACACTCTGTTGTGCAAAACTCATTATTGTGAAAATGTCTGTCATGCAGGTGATTGTCCTCAATGCAGCTACACTAGTACACAGCCATGTCAATGTGCCTCCGAAAAGACTAAAAGACCATGCAATGATCCTTTCTGGCAGTGTAAGAAGCCatgtaacaaattattttcatgCGGTTATCACAAATGTGAGAGGATCTGTCATTCTGGCAACTGTGGAGACTGTCCCAATTCTGGAACTTTATCATGTCCTTGTGGTGCTAACCAGCGTTTTGTCCAATGTCCAGATGTCATGGAAACCTGCCTAGGCACATGTGGTAAAAGGCATGAAGGTTGTGAACACAAATGTCCTGAAAAATGCCACAATGGTAACTGCCCACCTTGCCAAGTTCTTATTGAAAAGAAATGCCACTGCTCAACACATACGAGGTCCTTACCATGTAGCAAAGACTTCAAATGTGAGACAAAATGTAGAGGAGTAAGACTGTGTGGCAAACATGGTTGTGGAAGAAAATGCTGTAATGGGAACTGCCCACCATGTGAGAAAACATGTGATAAAGGTCTCCAATGTGGTCGACATAAATGCACAAATATCTGTCATCGGGGGCCATGCTATCCCTGTCCATTAGAATCTAAAGTTACCTGCAGATGCAAAGAGACTTATGTAAGAGTACCGTGTGGTCGGGAACGGCAGACAAAACCACCAAAATGCAACTTGccctgcaaaataaaatataagtgtgGCCATAGTgaagaaaataaacatcattGTCATTTTGGAGATTGTCCACCTTGCAAAGCAATCTGTGACAAACAGTATCCTATGTGCAGTCACCAATGTAAAGCAGTATGCCACGAGTATGTTGCCGTGCTGTTCAAACAGGTTGAGAAACCTGCTACTCCATGGGAAGTGCAACCACCAAAGACTAAAATAATGACCTTAGATTGTCCACCATGCGACACACCAGTACCAATGGTTTGTTTTGGAGAGCATGAGACAGACCAGCAACCTTGCCACACAGCTTCTCGGAGGCCTTGTGGAAGAGAATGTGGAAAACCATTGGCTTGTGGAAACCACAAGTGTTCTTTACTCTGTCATCTTTACAGCCCTGTCCCTGAGTATCCAAATGTGCCTTCGAGTTGTAAGCAATGTAACAGGGAATGTTCAGTTCCACGTCCTGTAAAATGTGCTCATAAGTGTCCCATTAGAGCTTGTCATCCCGGTCCATGCCGCCCATGTGAGATACTGGAACGGCTGGCCTGCCACTGTGGTGTCACTGAGATATACCTGCGCTGTCGAGAATTGTCTACAGCTACTGAAGAGATGTTATCATGCAAGCAACAATGTCCTAAGAACTTAGATTGTGGGCACCGCTGCCGTAACACTTGCCACTCAGGAGCTTGTGGCAACCAAGTTTGCACTAAGAAAACTAAAGTGCACTGCCCTTGTGGCAATTTAAAGAAGGAAGCTCCTTGCAACTCTGTTAGAAGTGGAGATACAAAGACATTGTGTGACCAAACCTGTGAAGCTAAGAAAAAAACTGCTAAAATAGAGCAGGAGAAAGAGAAACAGAGATTGAAAGAATTAGAGGAGGAAAAGAATCGTAAAGAGTTAGCAGAGTACGAGTGGAAGCTAAGCGGTAAGAAGAAGAAATATAAGGAGAAGAAGATGGCTGTCGATAAAGATGACCGAGGTTTCTTAAAGAGGTATTGGGTACCAATATCATCATTCCTAGTTATGATACTAGCCactgtttattatatattttatgtaggATTAGAATAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKELSSSEDEDPCESSVLETMFQSYWRGGGDTHMLNRTKNLLEEAISGRSVTCLICISSIKKSHAIWTCDHCFAYFHLSCIQKWSNDSISLRSEESTGPLAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGKTDDPPHHPWLIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICFCKKERKRVRCSAATWSCGQVCKNTLLCKTHYCENVCHAGDCPQCSYTSTQPCQCASEKTKRPCNDPFWQCKKPCNKLFSCGYHKCERICHSGNCGDCPNSGTLSCPCGANQRFVQCPDVMETCLGTCGKRHEGCEHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRSLPCSKDFKCETKCRGVRLCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIKYKCGHSEENKHHCHFGDCPPCKAICDKQYPMCSHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVPMVCFGEHETDQQPCHTASRRPCGRECGKPLACGNHKCSLLCHLYSPVPEYPNVPSSCKQCNRECSVPRPVKCAHKCPIRACHPGPCRPCEILERLACHCGVTEIYLRCRELSTATEEMLSCKQQCPKNLDCGHRCRNTCHSGACGNQVCTKKTKVHCPCGNLKKEAPCNSVRSGDTKTLCDQTCEAKKKTAKIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMAVDKDDRGFLKRYWVPISSFLVMILATVYYIFYVGLE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01440670;
80% Identity
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