Basic Information

Insect: Mamestra brassicae
Gene Symbol: -
Assembly: GCA_905163435.1
Location: LR990999.1:12734437-12745037[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1 84 4.6 1.4 2 23 1211 1233 1210 1233 0.92

2 8 0.35 30 6.1 1.7 2 23 1278 1300 1277 1301 0.92

3 8 0.00029 0.024 15.8 0.1 2 21 1319 1338 1318 1339 0.93

4 8 0.047 3.9 8.8 4.5 2 20 1348 1366 1347 1369 0.94

5 8 0.023 1.9 9.8 2.8 1 23 1382 1404 1382 1404 0.98

6 8 9e-08 7.5e-06 26.8 0.7 2 23 1411 1432 1411 1432 0.98

7 8 0.0003 0.025 15.7 0.4 1 23 1438 1460 1438 1460 0.97

8 8 2.1e-05 0.0018 19.4 1.8 1 21 1466 1486 1466 1487 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1	84	4.6	1.4	2	23	1211	1233	1210	1233	0.92
2	8	0.35	30	6.1	1.7	2	23	1278	1300	1277	1301	0.92
3	8	0.00029	0.024	15.8	0.1	2	21	1319	1338	1318	1339	0.93
4	8	0.047	3.9	8.8	4.5	2	20	1348	1366	1347	1369	0.94
5	8	0.023	1.9	9.8	2.8	1	23	1382	1404	1382	1404	0.98
6	8	9e-08	7.5e-06	26.8	0.7	2	23	1411	1432	1411	1432	0.98
7	8	0.0003	0.025	15.7	0.4	1	23	1438	1460	1438	1460	0.97
8	8	2.1e-05	0.0018	19.4	1.8	1	21	1466	1486	1466	1487	0.95

Sequence Information

Coding Sequence: ATGGAGAGGTTTTGCAGAGGATGTCTCATAAAATATGACGAACCGATGGAGCTGCTGCAATATACTGAAAAAAACAGAAGACTGTTTGTATACTCTACCGGACTTCAGGTGAAAAGAAATGACACCTTCACATTCCAGTTATGTAAGGATTGTTTCCTAAACATGAAGCAAGCCTGCAAATTCAAGAAGAATTGCCGAACATCTGATAAACAGTTTAGAAACTATATAGCCTTAAAAGATGTAGGGGACCCAGTGGATTTTTGCACATTCCTCAAGAATAGTGATGATACTTTAACATTCCGTCTGCCAATGGCAAGTGGGAGCAGCACACCAGCAGCACAAAAATGTAGGGATGATGATAATGAATCAACATGCACAAGCATCCGTAACTTCATGACAGATATCCTCCAAGGTGAGGAGATGCCTGACACAGAAGCACGGATCATTAAGGAGGTAATAGAAGAAGAGGCAGACTTACTGGATGACTCGCTCGATTCCCAGTGGCTGCAGGATGACATGTCCATTGATACGGACTTTAGATTGGATTTTAGTTTCAGTCAATTCTCGACGCCACACACTGTAAATGATGATCGGTGCTATACTCCGAAACAAAAAGAGGATCAAATGATCTTCGACACTATAAACActgagaaacaaacaaaaatcctTAAAGACTTCACAAATGCTTTCAACACTGATGATAATATTGAAGAACTTAGCATTTTTGTTGGCGGCGTAAGTGAAAATACAGAAAGTTTTGAGAAACTTAAAGAATTAAGTCCAAGTATAGATGAAATTGATGGTATGGGGAAATCTGAAATTGATGTtcttaaaagtaaacaaaatctCAAAGAGGTAATAATTGATCTTGGGATTGACGAATCTGAAGGGATGGACACATCAGACAGTAAAATAGACGAAAATGATCAAAACTTTAAAGAGTTAAGTGATTTCGGGATACAAGACATTACCACTCTCCGTGAAACGGAAAgtaatgaaaattataaagaatTTTGCAATTTTGGCAAAGACGAGATTGATGGCAATAGAGGTTTGGCTGTAAAATGTAATAAGAGTCTGAAACAAATGATAAGTAATCTTGACATAGAAGGAATGGGAAAATCAGACAGTAAAGATGCTAAAAGCAAACAGATTCTTGAAGAGTTTATGGGTAATTTTGGCAGAGATTTAACTGATTCATCTGGAAAACCAGATAATATAGATCCCAACAGTAATCCAAATCTCAAAGAATTGTGTGATTTTAGTTTAGATAGTTTTAGTGGTGCAGATAAAGCAGAAAATAAGACcctaaaaaatgttaaaagtctTAAAGAATTATGTGATTTCAGTTTAGACAGTTTTGAGGATACAGCGAAATCAGAGagtaatacttttaaaaataaccaaaatgtaaaagaattttgtaatttgagtataaatgattttgatgacattGCGAACTCAGGAAGCGTAAGAAATGATCGCAGAATAAAAGAAGTTTGTGATTTTGACATGGATGAAATTGACAAATCacaaagtaatttaaatataccAGTATCGTCTGAATTTTTAGAAACAGACAAAATAGATACACCAGATTTTGACATacctaaaaatgtaattagttcCATCCAGCCTAACAATGATGTCAGTAATAGCAGCATCAATATCGAAGCCTTTTTCAATGATAGACCAGAGAAAGACAAAATAGGTACACCAGATTTTGAAATACCTAAAGGTGTACTTGGTTCCATACCGTCGAGCAATGATGTCAGTAATAATAGCATCAATATTGAAGCTTTTTTAAATGATAGACCAGAAAAAGATAAGATAGATACACCAGATTTTGAAATACCAAAAGGAATTCCTTCTATACAGTCTGGTAACGACATTAGTAATAGCAGTATCAATTTTGACGCCTTGTTAAAAGGTAAACCAGAAAGAGACAAAATAGATTCACCAGATTTTGACATACCTAAAGGTGTTATTGGCTCCATACCGTCGAGCAATGATGTCAGTAATAACAGCATCAATATTGAAGCCTTTTTAAATGATATACCAAAAAGAGACAAGATAGATACACCAGATTTTGAAATACCACAACGTGTTATTGGTTCCATACAGTCAAACAATGATGTTAGTAATAGCAGTATCAATTTTGAGGCCTTGTTAAAAGGTAAACCAGAAAGAGATAAATTAGATTCTCCAGATTTTGACATACCTAAAGGTGTTATTGGTTCTATACCGTCGAGCAATGATGTCAGTAATAACAGCATCAATATTGAAGCCTTTTTAAATGATATACCAAAAAGAGACAAGATAGATACACCCGATTTTGAAATACCACAACGTGTTATTGGTTCCATACAGTCGAACAATGATGTTAGTAATAGCAGTATCAATTTTGAGGCCTTGTTAAAAGGTAAAccagaaagaaataaaataaattcaccaGATTTTGACATACCGAAAGGTGTTCTTGGTTCCATACCGTCGAGCAATGATGTCAGTAATAATAGCATCAATATTGAagcttttttaaatgaaataccaAAAAGAGACAAGATAGATAcaccaaattttgaaaaaccacAACATGTTATTGGTTCCATAAAGTCAAACAATGATGTTAGTAATAGCAGTATCAATTTTGAGTCCTTGTTAAAAGGTAAAccagaaagaaataaaatagattCACCAGATTTTGACATACCTAAAGGTGTTGTTGGTTCCATACCGTCGAGCAATGATGTCAGTAATAACAGCATCAATATTGAAGCTTTTTTAAATGATAGACCAAAAAGGGACAAGATGGATACACCAGATTTTGAAAAACCACAACGTGTTATTGGTTCCATACAGTCGAACAATGATGTCAGTAATAACAGCATCAATATTGAAGCCTTTTTAAATGATATACCAAAAAGAGACAAGATAGATACACCCGATTTTGAAATACCACAACGTGTTATTGGTTCCATACAGTCGAACAATGATGTCAGTAATAACAGCATCAATATTGAAGCCTTTTTAAATGATAGACCAAAAAGGGACAAGATGGATACACCAGACTTTGAAATACCAAAAGGAATTCCTTCTATACAGTCTGGTAACGATGTTAGTAATAGCAGTATAAATATCGAGGCCTTGTTAAAAGATAAGCCATGTTCAATAGATAAAAAATTAGAAGAGGCTTTGAAGAATACTGATAATAAAGAGTTTTCTTTGGAGGATATACTCATTTCACCACCAGTGCTCCCAGCGGCATCAGCTGCATCCACACCAACTATAACAAACATATTATTTGGTGAAAACCTCAACACAACTGATACCAATACTAAAATAGAACAATGTCTAGAATCTTATCACAATGTGCAAGGAGATATCGAAATATTCGAAGAATTCTTCCAAAATGATACAAAAGAATTTGACTTAGAAGATATTAAAAGAGTAAATGAAGGATTTAAACCAGGAGATTGGAGTAAACCCATTGATATGAATGATTTTGAATTTGctaataaagaaaatgattccaaaaatattgaagtagAAATATCTATTGATGGTAAAGAACCTATGATACACGTTTCGCAGGATGATGAAAATGACAAATTTAATATAACATACTTATACTGCAAATTGTGTAAAATAAGGTACGACACTAGGAGAGCATTCAGTGTCCATTTCGCgaagaaacataatattaaaatagtaaatcCAAGGAAACAAAACCGCAGGAAAAATAAACAGGATGTTAAAAAAACTAAGATGGTAGCGACTATAAACAGTTCCGATACACCTGCTAATGACAAATTTGATTTAGAAAATTCATACTGTAAATTATGCAATATAAAGTACGATACCAGTAGGGCACTAAGCATACATTTCGCGAAAACTCAccatattaaaattgaaaaaccaaaatgcgttaaaatcaacaaaaatcatgaaatagtATGTAATATTTGTGGAAAAATAAGCAGAGATCGCTCAAATTTCGCTAGACATGTGAAGAAATGTTCGCAAAAGGGGATGGTTTTGAAATGCGACCGTTGTCAGTTAGAATTCACGACGCAAGCTCATTTAGAAAAGCATAAGACCTGTCACACGACGATGAAGCGAAAGAAATATACAGGAAAGGAATTTGTTTGCACAATATGCGGTGCAATTTTACATAAGCAATGTAACTTCGTGTTGCATATGAGGCGACATACGAAAGACTACAGCGCTAAGTGCGAGTATTGCGACAAAGGATTCTATAGGCAATCCGATTTGAAAGCGCACATGAGGATCCACACTGGTGATACTGAATTTGCGTGCAAATTTTGCCCGAAGCTGTTCACTCGTAGAGACGTTTTATTAAGACACATTCTTATTCATCTTGaTGAAAGATTATTTGAATGTGACTATTGCAAGAagaggtttataaaaaaatacgatttaaaaaaacacatacagAATGAATCTTGTAGacctaagaaaaaaaataaagcagtcATTAAAGAAATGGACATTGATGTACCAAAGGAACCAGAAGAAGAAAGAGTAGAAATTAAAGAAGAAGTAATAGTAGAAGTTATAAAAGATGTTACAGTCATATACGCAAAAGGCAGTGAGGATACGATCAAACAGCAGTTGCCTTTCTTAGAAACAGAAAGAAGTAATTAg
Protein Sequence: MERFCRGCLIKYDEPMELLQYTEKNRRLFVYSTGLQVKRNDTFTFQLCKDCFLNMKQACKFKKNCRTSDKQFRNYIALKDVGDPVDFCTFLKNSDDTLTFRLPMASGSSTPAAQKCRDDDNESTCTSIRNFMTDILQGEEMPDTEARIIKEVIEEEADLLDDSLDSQWLQDDMSIDTDFRLDFSFSQFSTPHTVNDDRCYTPKQKEDQMIFDTINTEKQTKILKDFTNAFNTDDNIEELSIFVGGVSENTESFEKLKELSPSIDEIDGMGKSEIDVLKSKQNLKEVIIDLGIDESEGMDTSDSKIDENDQNFKELSDFGIQDITTLRETESNENYKEFCNFGKDEIDGNRGLAVKCNKSLKQMISNLDIEGMGKSDSKDAKSKQILEEFMGNFGRDLTDSSGKPDNIDPNSNPNLKELCDFSLDSFSGADKAENKTLKNVKSLKELCDFSLDSFEDTAKSESNTFKNNQNVKEFCNLSINDFDDIANSGSVRNDRRIKEVCDFDMDEIDKSQSNLNIPVSSEFLETDKIDTPDFDIPKNVISSIQPNNDVSNSSINIEAFFNDRPEKDKIGTPDFEIPKGVLGSIPSSNDVSNNSINIEAFLNDRPEKDKIDTPDFEIPKGIPSIQSGNDISNSSINFDALLKGKPERDKIDSPDFDIPKGVIGSIPSSNDVSNNSINIEAFLNDIPKRDKIDTPDFEIPQRVIGSIQSNNDVSNSSINFEALLKGKPERDKLDSPDFDIPKGVIGSIPSSNDVSNNSINIEAFLNDIPKRDKIDTPDFEIPQRVIGSIQSNNDVSNSSINFEALLKGKPERNKINSPDFDIPKGVLGSIPSSNDVSNNSINIEAFLNEIPKRDKIDTPNFEKPQHVIGSIKSNNDVSNSSINFESLLKGKPERNKIDSPDFDIPKGVVGSIPSSNDVSNNSINIEAFLNDRPKRDKMDTPDFEKPQRVIGSIQSNNDVSNNSINIEAFLNDIPKRDKIDTPDFEIPQRVIGSIQSNNDVSNNSINIEAFLNDRPKRDKMDTPDFEIPKGIPSIQSGNDVSNSSINIEALLKDKPCSIDKKLEEALKNTDNKEFSLEDILISPPVLPAASAASTPTITNILFGENLNTTDTNTKIEQCLESYHNVQGDIEIFEEFFQNDTKEFDLEDIKRVNEGFKPGDWSKPIDMNDFEFANKENDSKNIEVEISIDGKEPMIHVSQDDENDKFNITYLYCKLCKIRYDTRRAFSVHFAKKHNIKIVNPRKQNRRKNKQDVKKTKMVATINSSDTPANDKFDLENSYCKLCNIKYDTSRALSIHFAKTHHIKIEKPKCVKINKNHEIVCNICGKISRDRSNFARHVKKCSQKGMVLKCDRCQLEFTTQAHLEKHKTCHTTMKRKKYTGKEFVCTICGAILHKQCNFVLHMRRHTKDYSAKCEYCDKGFYRQSDLKAHMRIHTGDTEFACKFCPKLFTRRDVLLRHILIHLDERLFECDYCKKRFIKKYDLKKHIQNESCRPKKKNKAVIKEMDIDVPKEPEEERVEIKEEVIVEVIKDVTVIYAKGSEDTIKQQLPFLETERSN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953021;
90% Identity: iTF_00953021;
80% Identity: -