Basic Information

Gene Symbol
-
Assembly
GCA_905163435.1
Location
LR991013.1:7925359-7931020[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.13 1.5e+02 3.3 0.5 3 18 74 89 73 129 0.59
2 7 0.0056 6.7 7.6 0.0 21 44 344 368 335 370 0.86
3 7 0.0026 3.2 8.7 0.2 13 43 432 467 417 470 0.71
4 7 0.0052 6.3 7.7 0.2 22 46 584 618 572 618 0.74
5 7 0.001 1.3 10.0 0.2 3 44 669 719 667 721 0.79
6 7 6.6e-05 0.08 13.8 0.2 13 42 852 888 837 892 0.84
7 7 0.05 60 4.6 0.1 3 15 1047 1059 1045 1106 0.81

Sequence Information

Coding Sequence
ATGGAGGGCTCTATAGTGGTTAAAACTGAGATGGGGACTAATGGAGAAATATTGCTTTTCTATGTTGATGaAAATGGTGGCAATGAAGAAGGGGTACTAACAACTGTTGAAAGCATAGAAAACCAAGCAATACAACTGCAACAAGATAACTCCTTCATCATTCAAGATGTTACAGATGACTCCAATGAAATCAGTGCTGATCAGTCTGCATTAATAGATCACTGGACCGAGGATGAAACTAAGAAACTGCTGGTCTTCTACAATGATAATAAACAGACTTTCATCAATGGTACAACCAAGAAGATGCATCTATGGACCGTAGCGTGCAAGACCATGATTGTGGGTAAAAATCCAAACTCATGTGAAGCTAAATTGAACAGCTTACAAGCAAAGTATAACGAAATTTGTGGCCACATACAGAAAGGAGTCTATGTAAAGTGGCCATACTTTGAACTATGCCATCAAATTTTCCATGAGGAGACCCCCATGATTACAGTTGAAACCTTAAATACACCAGAACCACAAATAATTAAAGTTCCTGCTTCAAGACAGAATCATGATAATGTAATGATGGTTAAAAAGGTGAATAGTAGGGCACCAGCTGATGAAAAAGTTGAAATGATGCTAAAGTTGTATCTGAAATACAAGAAAAACTTCCAAGCTGAGTATTGGAGACGTGGCATATGGGAGACCATTGCGTTAGAATTGGGTGAAGATGATGGAGAATACTGGCAGAAACGTTTCTTGAACTATAAGCAACATTACCTGAGATTGATAGACAAAAGAAGAGAGAGTGGCCCGGAAGGCATCAATTGGCCATACTTAGAACTATTCGACAAAATCTTTGAAGGTGATGAGGACTTCAATAGAAAATATCTGACCGAGGAGTACAGACAAATCGAAAACCAGGCAATCTCTGAAGTTGAAGAGCCCCCATCTAAAGTGGTTGATTGGGACACCACAGAAAAGACCGTATTAGTAAAATACTGTTTTGACTGCTTTGACGAATTTCAAGACAAAACCATTCCAAATAATTTCCTTTGGACTGAAATTGGCCGTTTACTGGACAAGACTGCTGAGGCttgcaaattaaaatatgaagaacTAAAGAATGCACATTTAGACAAATATATAGAAGGTGGTTACGATTTACGAACAAGAAAGCCAATTGCAATATTGTTTGACAATATAATATCCAAAAACACTGAggatcaaataataaaaagtggcAAAATACCTGAGCAACTAGAGATGTGGAAGACTGAGGAATTAGATGAATTAGTGCAATTCTTTTATGACAACATAGAGATGTACAAAGATCTGGTCTGCCATTTTGTATGCTGGGCAGGGGTTACCAAAAAGTTAAAGCGAACTCTGCAAAGTTGCCGAAGCCAATGGGAGGATCTTGTAAGCTTGTATACGACAATATTGAATGATAAGAAAGAGGATCCTGATATGCAGATAGATTGGCGATACATTGAAGTGTTTGATAGGATCTTTGACTATGGCATGGATACCAACTTGCTTTCTGGGTATGAAACTTTGAAAGGATTAGGACAGAatcagaaaaaagaaaattcaggGAAGATTGGTGtAAAGAAAGTAAACATCAAACTGGACGACGCCATGGAAGAATTGACCGATGACGATGAATCCTACGACGAACGAGGCTTCACGAAACGCACCAAGAGACGCTCAGGCGACTCCAAAGCATTCAAAATCCTCGAATACTACCAGAAAAATAAAGACAAGTTCTCTACTACGAACCGTAACAAACATTCCCTATGGGACATACTGGCTAAGCAGATTGGCATATCAGCAACGCAATGCGCACACCGTTTCAGGAACCTAAAACAAGTCTATACAGCTTACGTCCAAAGAGAAATCAGCAAACCTGAAATGCCAATCCTCTGGCCATACTATGCACTATGCAAGAAAGTTTTCGGTTATAGAGCaattaaatctaaactaaaaaaTGGAAAACTGGATTCAGATGACAGCGAAGACTGGTCAGCAAAAGAAATCAAacaattaataaactatttctcTCACAACTTTGATGATATTAACCTTAACATAGAAGACACCACAAAATGGTCGGACTTAGCTGGTGAAATAGGTAAAGGAGAGAATTCTTGCAAAGAAAAGTTATTAGAACTTCGCAAGTCTTAtagaaaattgaaaactatGAGAAGTAGGAACCCTGATGTTAAGATTTCTTGGAAGTATTTCAATATGTTTGAAGATATTTATAAAGCTAAGGAGAATGGTGTGGAGACGATTGAAGTGGATGATAGTGAGATCACGTATATGGAAATACCTGCGTCAGATGATAGGGTTGAGCAAGAAGAGGACGACTACCAATGCATCATAGTAATACCAGAAGGGCAAGATATATCACAGATTGAGAATGCTCGAATTATAATACAAGAAAACTCTGCCACAATGCCTCAAGAACAAGAAACTATCCAAAAAGAACCTGAACCGCCCAAGGAGGTCAAACCTCTTTTAAAATGGACCAAAAGAACTAAAAAGAGGTTGCTTATATTCTATATAAACTATATCAGAATGCATAAAGGGAAGGAAATTATTGCCAAAGAAATGTGGGCAGAAATTGCGTTAAAGATTCCTAACAAAACACCGCTTGcttgtagaaaaatgttcgCCAAACTCAAGGCTAGTCACAAACAAATTGATGAATCTAACCCTTCCATGAAGAAAACTCCTTATTTTGCGTTAATGGAAAAAGTCATGCGTTTGAAACCGAAATTTTCGAAAACGgaacaaaataaagatttaaaagacGGAAAAGTATACAAAGATGTCGCCTTACCTGATGAAAAAGTAGTACAAGCTTTGCAGtactatttagaaaatatagaaGATTTCGTCAGTCCAAGATTTGAGAAGAAATACCTCTGGACTGAACTAGCAAATTACGTTTGCGAGCCAATAACTAAAGTCTTCAATAAAATCAACTATTTAAAACAAGCTTACAACCTGGAtacggacgaagttgcgggagTAAAGACTCCATTTGCAGAGTATTTGAAAGAAATATTTGCTAAAGAGATAGCAATCAATCTCTTCTTAGAAAATCAACCAAGGCCTGTCATTGAAGAACCGGGTGTTGAAGAAACCTGGTCTGATGAAGAAACTGAACAGTTACTAGAATGGTATCTAAGCAATTTAGACAAGTTCAAGAACCCCAAATACGTCAGAAGTTACCTCTGGATGGAAGTTTCTAGCATGCTCAACAAAAGTGCTATCACCTGTTCCAAGAAAATGTCTGAAGTTCGGACGCAGTACAGGAATATGGTGAGGGAAAGGCCTGAGGAATTGAATGAGTGGAGGTTCCTTGATCTTTGTCAGAAGATATATGGAACGGGAAAGAAAGGTACCCcaatgaatattaattaa
Protein Sequence
MEGSIVVKTEMGTNGEILLFYVDENGGNEEGVLTTVESIENQAIQLQQDNSFIIQDVTDDSNEISADQSALIDHWTEDETKKLLVFYNDNKQTFINGTTKKMHLWTVACKTMIVGKNPNSCEAKLNSLQAKYNEICGHIQKGVYVKWPYFELCHQIFHEETPMITVETLNTPEPQIIKVPASRQNHDNVMMVKKVNSRAPADEKVEMMLKLYLKYKKNFQAEYWRRGIWETIALELGEDDGEYWQKRFLNYKQHYLRLIDKRRESGPEGINWPYLELFDKIFEGDEDFNRKYLTEEYRQIENQAISEVEEPPSKVVDWDTTEKTVLVKYCFDCFDEFQDKTIPNNFLWTEIGRLLDKTAEACKLKYEELKNAHLDKYIEGGYDLRTRKPIAILFDNIISKNTEDQIIKSGKIPEQLEMWKTEELDELVQFFYDNIEMYKDLVCHFVCWAGVTKKLKRTLQSCRSQWEDLVSLYTTILNDKKEDPDMQIDWRYIEVFDRIFDYGMDTNLLSGYETLKGLGQNQKKENSGKIGVKKVNIKLDDAMEELTDDDESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWDILAKQIGISATQCAHRFRNLKQVYTAYVQREISKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFSHNFDDINLNIEDTTKWSDLAGEIGKGENSCKEKLLELRKSYRKLKTMRSRNPDVKISWKYFNMFEDIYKAKENGVETIEVDDSEITYMEIPASDDRVEQEEDDYQCIIVIPEGQDISQIENARIIIQENSATMPQEQETIQKEPEPPKEVKPLLKWTKRTKKRLLIFYINYIRMHKGKEIIAKEMWAEIALKIPNKTPLACRKMFAKLKASHKQIDESNPSMKKTPYFALMEKVMRLKPKFSKTEQNKDLKDGKVYKDVALPDEKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKINYLKQAYNLDTDEVAGVKTPFAEYLKEIFAKEIAINLFLENQPRPVIEEPGVEETWSDEETEQLLEWYLSNLDKFKNPKYVRSYLWMEVSSMLNKSAITCSKKMSEVRTQYRNMVRERPEELNEWRFLDLCQKIYGTGKKGTPMNIN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00771874;
90% Identity
iTF_00851758;
80% Identity
-