Mbra000179.1
Basic Information
- Insect
- Mamestra brassicae
- Gene Symbol
- jarid2b
- Assembly
- GCA_905163435.1
- Location
- LR990987.1:3340047-3353836[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-19 7.5e-16 59.0 0.2 12 89 1074 1150 1067 1150 0.90
Sequence Information
- Coding Sequence
- ATGTCGTTAAGGTCGCGACGCTTGAGCACACTGGAAATGAACAAGCTCGTAGCACTAAGTTGTGCGCCATTAAGAAAGGGTACCTCGAAGCGTAAAAGAGAATCTTCTGACGAGGATGAGCCACTTATTTACCAAAAAACTCGCAAAAAGAGCCTTACTGCTACTGCTAGTGAGAGTAGCCCTTGTGAGATATACAAAATGAAATCTTCCCAGGACATTTATGTACCTCACAAGATCACAGCAAAAGAGATCAAAACAAATCCAGTCTCCTCAAAGCATATCAAAGAGAATAGTGGCAAAAAAAAGAAGAGCGCTCTTCAAAAGAAGATTCCTAAAGAGTGGTCTCACAAAAAGCCAGTTATCACCGCCATTAAAGGCCTCACGATTATAAGtaacgaagttattaaagaggCTGAACTTGATAATCTAGTCGGCCGAAATGACTCAGTTATAGTTGCAAACGCGGTAGACCCAGTAGTAAACCCATATGATCCCATAGAAGTCCCTGTTTGTCCCGTAGTAGTCCGAGATCCACCTGTAGTAGTCccagaagatgatgatgaatacctAGAGGCTTTGGAGATAATCATAGACGTCCCGTTAGTAACCCCAGATCCACCTGCAGTAGTCCCATGTGCTCCTGTAGTAGTCCCAGGTTCTCCTGCAGTAGTCCCAGATGCTCCAGTAGTAGTCCCAGATGCCCCTGTAGTAGTCCCAGATGCTCCTGTAGTAGTCCCAGGTGCTCCTGTAGTAGTCCCAGGCTCATCTGTAGTAGTCCCAGGTTCTCCTGCAGTAGTCCCAGATGCTCCAGTAGTAGTCCCAGATGCCCCTGTAGTAGTCCCAGATGCACCTGTAGTATGCCCAGGTGCTCCTGTAGTATTCCCAGGTGCTCCTGTAGTAGTCCCAGGTGCTCCTGTTGTAGCCCCAGGTGCTCCTGTTGTAGTCCCAGTTGCTCCTGTAGTAGTCCCAGATGCTCCAGTAGTAGTCACAGATGCTCTTGTAGTAGTCCCAGATGACCCGGAAGTAGTCCCTCATGCCCCGGTAGTAGTCCCAGATGCTCCTGTAGTAGTCCCAAGTTCCCCGGTATTAGTCCCAAGATATCGGTACTCCTATATATCCCCAAAAACCCAGTTTGAACCAATGGAGAACATGACGCCTGAGCAGAACGAGGCATATTTAGCTAGAATGGAATTGGCTCTAGCCGACATAGAAATTATGCCCGTTCTGGACAAACTTATCTATGATAGTTCGATGGAGGAGCAGGAAGATCAAGAACACGATGAAGTCCCAGTACACAACGAAGACCCAGTACGCGACGAAGTCCCAGTACGTGACGAAGGCCCAGTACGTGACGAAGTCCCAGTACGTGACGAAGTCCCAGTACGTGACGAAGTCCCAGTACGTGACGAAGTCCCAGTACGTGACGAAGTCCCAGTACGTAACGAAGTCCCAGTACGTGACGAAGTCCCAGTACGTGACGAAGTCCCAGTACGTGACGAAGTCCCAGTACGTGACAAAGTCCCAGTACGTGACGAAGTCCCAGTACGTGACGAAGTCCCAGTACGTGACGAAGTCCCAGTACGTGACGAAGTCCCAGTACACGACGAAGTCTCAGGACACGAAGAAGTCCCAGTACACAAAGAAGTCTCAGAACACGACGAAGTCCCAGTACACGACGAAGTCCTATTGAACCCGAGAGACATATCAGACCAAGATAGTTCTTCTTCAAATACGCCTCTGATATACCGTTCGGAGGACTCTGATGATGAGTCGATGATGGCAGGTGAACCGGCGGTCAAGCAACTAAATAGACGTACCAGCGACTCTCCTGaaCCTGGACCAAGTGGCATGCAGTTCCAATTCAGAAAGAATGATTCATACTCCAGTCAACATAATAATGGCGAGAGAAGCAACGAAATACAGGCTCTcatcaaaaaaatttttgaaaatgcaAATGTCGATTTTGAGATTACACGAAATGTTCAGAAATCACGAAATGTTCCGAAGACTTGCGTTGCGGCAAAGTGGAACTCCGAGCAGGATTTCATTGAAGCCTCTACAGAAGCACAAAACTCCCGCTGCAAGGTTTGTGAGTCCTGCAACAGAATTGACGAAATGATAGCTGCATCGAACTTATTGAATAAACTTGAAAGGGGCAATAGCAGCTTCTGTGGCGGCGCAACCGTGCATCCAGAGAACAAACGAGAGACCGAAAACGGTAAGACAGTAAGTGGCAAAATGGGCAACAAGAATGATGAAGAAATTGATGGTGAATATGCTCACTTGGACATTTCTTCAAAACATTCTAATGTAACGATGCAAGTTAGACCTCCCGTCGACAGATCAGACCGCAGAGCGATCTTGGGGGTGAATTGTGAGACAAATGGTGAATCTTCGAAAAATAACGAAGACCTTCTTGAACACCAAAGAGACACCCTGAATATTACTCAAAACGTAAACTCAGAGAGTCCAAACGTAAACTCGgaaaatcaaaacaattatCGAGTTGTTGGAAGTATAGTCTTAACTTCCAGCGACACTGACATGAGCACTGATAGTAATTCTGACCCAGAAGAGGTGCGCCGCGCGAGGGCTAGAGAAAGGAGGACAATTAGGAACCAGAAATTACTCGCTAGTAGAAGGGCAAGGTTAGCTGAAGCCAGGCTAGAACGCATCAGGCAAGGAAAGAATTATATAAATCCACTACTGATAGAGCTAAACGAAAAAGAACAGGCGATGAAAGAAGCCTTAACTCTGCGACTGAAACAAATGCAACAGGAGAGAACGAAGGAACTTGCTCGCATGAGGATCAAACTCTCAGACGAAATACGAGCTGAAATAGAGGCTGATCGCCTTATGATCAAGGAAGTGGACAGTATGGCGAACTCCTTGGATAAAGAAACGGACGCCAAGAGTTTGTACCCGACGCCAAGTGCAGATTTACCTAGCGCCAGTAGTATATCACCGACGGAAGGCGAGACTCTAGTAGACGCGCCTGTATTCTTCCCCTCTGAAGAAGAATTCAAAGACCCCATCGCCTACTATGAAAAGGTCTATACACAAACAGTGAAATATGGAGTATGTAAGGTGGTGCCACCATTTGGCTGGTTCCCTCCCTCGGAAGTGCATGGGGACATAAGGTTCGATGTAATGGACCAGTACATCACACGGCTGTTCTGCCGCTGGGGACCGGCCTCGAGGGAGCTCAGTGCTATCAAATTGTGTCTTCAGcaaaatactaatataaattatatgcgACTACCACAAttgaatGGTGTGGAAATAAATTTACCGAAATTTTATCACCTTGTGCAACGGCTCGGCGGTCTGGAATCAGTTATCAACAAGAAACGATGGGCTAAGGTCGCAGATGACCTGCAAGTTGTTAAGAATGggaattttgagaaaaaattaGACCAAATTTACGTGAAGTATTTACTACCATACGACACGCTTTCCAATAAGGAGCGCCTGGAGACAATACGGAAAGTCGAATTGTTTTGGACCAGAAAGAATCAAAAGCTGTTGGAACGCGCCATGAACCCGCTATACCGCCAGCAGCGAATGCTCGGTTTATTGGACTCATCTTCGGACGATGAGGCCGAAGATGATGATACTAAGGCTGCTCTCTTTCAGGCAGAAGACTGCATCGTCAAAGGAACCGTTATGCAGTACCACCGATTCAAAAAGGTGGCGTCCACGTTGTACGAGAACACGTTCGGGCTGGGCTCGGAGGCCTCCCCGCCGTCGCTGAAGGAAATCGAGGACAAGTACTGGAGCCTCGTCACGTCGGGCACGGATCACGTGTGCGTGCACACCGCGGCCATAGACACCGGCGAGCAGGCCCACGGCTTCACAACCCGCGTGAAGCCGTTTGACAAACATATGTGGAACCCCAAGGAACTCCACAAGAACGCTCGCAATGTGCTTCACCACTTGGGTCCCGTGGTAGGCGTTACGGTGCCCACTCTGCTTCTGGGAATGCTGTTTTCGACCTCGTGCTGGCACAAAGATCCACATGGAGTAGCGTGGCATGAGTTCCAGAGTAAGGGACCCACCAGAATCTGGTACGGGATCCCAGTGGACCAGGCGGAGAACTTCAGGAAGGCTTTAGAAACGTTGTGCCCGACGTCATGCCAGAACAAGGCCCTGTGGCTGTCGTCGGAGATCGCAATGATCCCGCCGAGCATCCTGCGCGAACACAACGTGCGTTTGTCGCGCGTGACGCAGTACGCGGGCGAGTTCGTCGTGGCCTATCCCAACGCCTACACCAGCTGCATCAGCACCGGCTACACCGAGTCCGAGAGTGTGTACTTCGCATCGGCGAAATGGCTTGACTCCATGTGGAGCGCCTTCAAGATAGCACGTGAGAGCTGCGAGCCGACGATGTTCTCAATAGAGCACCTGCTCTACAACATAGGCCTAGACAAGAGTGCGAACAGGGAAGTATTGGAGTGCACGCTGCCGCTGTTCGACAAGATGATGCGCGAAGAGGTCACCAACCGGCAGGTGCTGCAGGAGAGAGGAGTTTCTTTCGCGCAAGAGCTGCTGAGCGCTCAGCCTGAGGAAGAGTCGGAGATCAGCGCGCGCACTCTAGAAGAATGTGATTACTGCAGGGCTTCACTGTTCCTCTCCAAGGTAAAGGGGCTGCCCGAGGAGAACTCGGTGCTGTGCCTGGAGCACACGCTGATGCTGCTGGACTTGGAGCGGAACAAGCACATAGACGTGCAGCAGCTGCGCGGGCTGGTGCACGTCAGCGTCAACGAAATGCGCAAGGTGCACGATGACATGCAGCGCCGGCTGTGCACCAAGTAG
- Protein Sequence
- MSLRSRRLSTLEMNKLVALSCAPLRKGTSKRKRESSDEDEPLIYQKTRKKSLTATASESSPCEIYKMKSSQDIYVPHKITAKEIKTNPVSSKHIKENSGKKKKSALQKKIPKEWSHKKPVITAIKGLTIISNEVIKEAELDNLVGRNDSVIVANAVDPVVNPYDPIEVPVCPVVVRDPPVVVPEDDDEYLEALEIIIDVPLVTPDPPAVVPCAPVVVPGSPAVVPDAPVVVPDAPVVVPDAPVVVPGAPVVVPGSSVVVPGSPAVVPDAPVVVPDAPVVVPDAPVVCPGAPVVFPGAPVVVPGAPVVAPGAPVVVPVAPVVVPDAPVVVTDALVVVPDDPEVVPHAPVVVPDAPVVVPSSPVLVPRYRYSYISPKTQFEPMENMTPEQNEAYLARMELALADIEIMPVLDKLIYDSSMEEQEDQEHDEVPVHNEDPVRDEVPVRDEGPVRDEVPVRDEVPVRDEVPVRDEVPVRDEVPVRNEVPVRDEVPVRDEVPVRDEVPVRDKVPVRDEVPVRDEVPVRDEVPVRDEVPVHDEVSGHEEVPVHKEVSEHDEVPVHDEVLLNPRDISDQDSSSSNTPLIYRSEDSDDESMMAGEPAVKQLNRRTSDSPEPGPSGMQFQFRKNDSYSSQHNNGERSNEIQALIKKIFENANVDFEITRNVQKSRNVPKTCVAAKWNSEQDFIEASTEAQNSRCKVCESCNRIDEMIAASNLLNKLERGNSSFCGGATVHPENKRETENGKTVSGKMGNKNDEEIDGEYAHLDISSKHSNVTMQVRPPVDRSDRRAILGVNCETNGESSKNNEDLLEHQRDTLNITQNVNSESPNVNSENQNNYRVVGSIVLTSSDTDMSTDSNSDPEEVRRARARERRTIRNQKLLASRRARLAEARLERIRQGKNYINPLLIELNEKEQAMKEALTLRLKQMQQERTKELARMRIKLSDEIRAEIEADRLMIKEVDSMANSLDKETDAKSLYPTPSADLPSASSISPTEGETLVDAPVFFPSEEEFKDPIAYYEKVYTQTVKYGVCKVVPPFGWFPPSEVHGDIRFDVMDQYITRLFCRWGPASRELSAIKLCLQQNTNINYMRLPQLNGVEINLPKFYHLVQRLGGLESVINKKRWAKVADDLQVVKNGNFEKKLDQIYVKYLLPYDTLSNKERLETIRKVELFWTRKNQKLLERAMNPLYRQQRMLGLLDSSSDDEAEDDDTKAALFQAEDCIVKGTVMQYHRFKKVASTLYENTFGLGSEASPPSLKEIEDKYWSLVTSGTDHVCVHTAAIDTGEQAHGFTTRVKPFDKHMWNPKELHKNARNVLHHLGPVVGVTVPTLLLGMLFSTSCWHKDPHGVAWHEFQSKGPTRIWYGIPVDQAENFRKALETLCPTSCQNKALWLSSEIAMIPPSILREHNVRLSRVTQYAGEFVVAYPNAYTSCISTGYTESESVYFASAKWLDSMWSAFKIARESCEPTMFSIEHLLYNIGLDKSANREVLECTLPLFDKMMREEVTNRQVLQERGVSFAQELLSAQPEEESEISARTLEECDYCRASLFLSKVKGLPEENSVLCLEHTLMLLDLERNKHIDVQQLRGLVHVSVNEMRKVHDDMQRRLCTK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00952489;
- 90% Identity
- iTF_00952489;
- 80% Identity
- -