Basic Information

Insect: Malthinus seriepunctatus
Gene Symbol: -
Assembly: GCA_963924605.1
Location: OZ004602.1:9768626-9769648[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.3e-05 0.00089 20.1 0.8 2 23 59 80 58 80 0.97

2 9 0.027 1.9 9.6 1.1 1 23 84 106 84 106 0.97

3 9 0.011 0.75 10.8 2.3 1 19 141 159 141 163 0.94

4 9 0.043 3 9.0 2.8 1 23 169 192 169 192 0.97

5 9 0.00042 0.029 15.3 4.9 1 23 203 225 203 225 0.97

6 9 8.7e-05 0.0061 17.4 0.6 2 23 231 252 231 252 0.97

7 9 1.5e-05 0.0011 19.8 2.8 1 23 258 280 258 280 0.98

8 9 3.6e-05 0.0025 18.6 2.4 1 23 286 308 286 308 0.97

9 9 0.0016 0.11 13.5 1.1 1 22 314 335 314 335 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.3e-05	0.00089	20.1	0.8	2	23	59	80	58	80	0.97
2	9	0.027	1.9	9.6	1.1	1	23	84	106	84	106	0.97
3	9	0.011	0.75	10.8	2.3	1	19	141	159	141	163	0.94
4	9	0.043	3	9.0	2.8	1	23	169	192	169	192	0.97
5	9	0.00042	0.029	15.3	4.9	1	23	203	225	203	225	0.97
6	9	8.7e-05	0.0061	17.4	0.6	2	23	231	252	231	252	0.97
7	9	1.5e-05	0.0011	19.8	2.8	1	23	258	280	258	280	0.98
8	9	3.6e-05	0.0025	18.6	2.4	1	23	286	308	286	308	0.97
9	9	0.0016	0.11	13.5	1.1	1	22	314	335	314	335	0.94

Sequence Information

Coding Sequence: ATGTTGAACGAATACGAAGATGAATTGTCTAATCTGAACGACTCCAAATTCTTTGTCTGTCACGTTTGTAAGGACGAAGCGAAAATGACTGAAAAAGAATTGCGTCAACATTTTAAAGACGAACATCAGGGCAAAAGGTTGAGGAGTTTGAAATTGCATTCCGAAAATCCAGTTTCGTGCGATGTGTGCAACAAACAATTTCGGTCGTCGAAAAGTTGGAAGGAACACATGGAAACTCACAGTAACGTATTTAACTGCGAGACATGCAAtgttcagtttaaaaaaattttggactATACCCTTCATTTACGTTTACACGATCCTCAAGACGTCTTTAAGTGCGTGTTGTGCGACTTTTTGACCGATTCGATTAACGAAATATCTGACCACGTGAATAATACCCAcaatcaaaatttcaagtatCAATGCAGGATTTGTGGAAAAGGTTTTCACGTATATTCTTGGTTTAAAGAGCACGATAATTTCCACACTGGGTTGAAACCGTTCGAGTGTGATTTTTGCGAACAGCACTTTTTGTATTCGCGCTATTTAACGGCGCATAAAAACACCGTTCACAAGGAAGAAATGGCCGGTGCTCCAAGCATTCACGAATGCGTTATTTGCAAAAAGAAATACCaacataaaaatagtttaaaacttcACATGAACGTTCATACAGGAAACGTTGCCGTTTGCGACGTTTGTGGAAAGTCTCTTTcaagtaaagaaaaattaaagtttcataTGCGTATTCATACGGGTTATAAGCCTTTCAGTTGCACTTTTTGCGGAAAGTGCTTCACTAAAAAGCCTACTTTGGTAGAACACGAGCGAATTCATACTGGCGAAAAGCCATATCATTGCGACTTTTGCTCGAGACGCTTTTCCCAAAGGTCCAGTTTGGTTATTCACGTGCGTGGACATACCGGAGAAAAACCTTATTCTTGCCATATTTGTCATAGAAGTTACGTTGCTCGAGCCATGctaaatattcattttaaaacttgtaaagGGGTTATATGa
Protein Sequence: MLNEYEDELSNLNDSKFFVCHVCKDEAKMTEKELRQHFKDEHQGKRLRSLKLHSENPVSCDVCNKQFRSSKSWKEHMETHSNVFNCETCNVQFKKILDYTLHLRLHDPQDVFKCVLCDFLTDSINEISDHVNNTHNQNFKYQCRICGKGFHVYSWFKEHDNFHTGLKPFECDFCEQHFLYSRYLTAHKNTVHKEEMAGAPSIHECVICKKKYQHKNSLKLHMNVHTGNVAVCDVCGKSLSSKEKLKFHMRIHTGYKPFSCTFCGKCFTKKPTLVEHERIHTGEKPYHCDFCSRRFSQRSSLVIHVRGHTGEKPYSCHICHRSYVARAMLNIHFKTCKGVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -