Basic Information

Insect: Malthinus seriepunctatus
Gene Symbol: -
Assembly: GCA_963924605.1
Location: OZ004603.1:36316808-36318781[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0007 0.049 14.6 5.3 1 23 374 396 374 396 0.99

2 8 1.1e-05 0.00079 20.2 0.8 1 23 402 424 402 424 0.96

3 8 9.3e-05 0.0065 17.3 0.7 1 23 430 452 430 452 0.98

4 8 0.00046 0.032 15.2 5.7 1 23 458 480 458 480 0.98

5 8 0.00013 0.0094 16.8 5.1 1 23 486 508 486 508 0.96

6 8 0.00017 0.012 16.5 0.7 1 23 514 536 514 536 0.98

7 8 0.037 2.6 9.2 1.2 1 23 541 563 541 563 0.97

8 8 0.00011 0.0075 17.1 1.6 2 23 614 635 613 635 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0007	0.049	14.6	5.3	1	23	374	396	374	396	0.99
2	8	1.1e-05	0.00079	20.2	0.8	1	23	402	424	402	424	0.96
3	8	9.3e-05	0.0065	17.3	0.7	1	23	430	452	430	452	0.98
4	8	0.00046	0.032	15.2	5.7	1	23	458	480	458	480	0.98
5	8	0.00013	0.0094	16.8	5.1	1	23	486	508	486	508	0.96
6	8	0.00017	0.012	16.5	0.7	1	23	514	536	514	536	0.98
7	8	0.037	2.6	9.2	1.2	1	23	541	563	541	563	0.97
8	8	0.00011	0.0075	17.1	1.6	2	23	614	635	613	635	0.97

Sequence Information

Coding Sequence: ATGGAAAATGTATGTCGTACGTGTTTACGTGTAATTGAGAGTACATATTCAATTACGTACTTATACGGTTCTAAAAAAAGTTCTGAAGCAGTATCGATTCGACAAAAATTACAAGCGTGCGTACCGGAACTGACTTTAGACATCGTTGCCGATCCCGCTATTTGCAGTACTTGCACTTCGGCACTTACGTTTGCATTCCAATTCAGAAGTACATGTTTACAAACAGAAAAAACTTTATATAAGTGTATTCAAAGCAGGAGGAAGCATAACCCAAATTTTACAGATTTGCTAAGTACAAACGATCTCTTGCAAATTGCGCGGAAAGGAATACAGGACGAACATAGTTATTCATATGCTGAACGATACTCTCCGGTGGATAATTCCTGTGATGAAAGTAGTTCAGATCAAGAAACTCAATCTGTGAGCTTGTCTAATCGAGTTCAATCGTCATTGggagaaattgttaaaaaagtaaataccgctgaaaaaaaaagaaattctgGTGATAAGAAAGTAAATACCGCTGTTAAAAAAGTGAAGCCTGTAAATGAGCCATCTTTCAATATTAAAACTAGCCCTAAAAAGTACACGAACAAGAATAAAGTAAAAACTTCGCCCAAGTCGAAAAATTTACCGGCACCTAGTTCTACTATTAATTTTGAACATATTACAATTAAACCGGACTTTCCTAGTGaaagtgttaaaaaagtttCTAGTTTGCCACTTTCAAAATCaatagataaattaattaagaaacttAAAGATCATGCTGACCACGATTGTGGTACAATTGTAAATACGGATTTGGGTGTGTTGTCGGCTAATAGTCCAAAAAGTAAAGTGCGAAAAATGCCAAAGATACGGGCTGCTACAAATAAAAGAGAAAGAGACGAACCGTTAGAAGATGCATCTAAAAAACGACAAAAATTATCTCTTGGTACAcgacaaattaatataaaacgaACTTGCCGTGGACAAAAGAGTCCCAACAGAGCTACCAACACTAATGAAAAAGTTGTTACGAAGAAGGAGGCTTCGACTGATGAAAGTAACGATAGCGAAGGAAGTGTCGGTAATTTTAATGTTACCGCTTACGTTAAACCGGAAAGTTCTTTTCGCTATCAGTGTAATAGATGTAACAAAGGCTACAAATTCAAATCCCATTTTGACGTTCATTTAAAATCTCACATAATTAAAAAGCTGTTTTCGTGTCCAATATGTAACAAAGATTTCACTCAGGAGAAATACCTTAAAACTCACGCTATGCTTCACACGAATACTGGGTTATACCAGTGCGATTTATGCTCAAAATATTTATCGTCATCTACAGCTCTCAAGCGTCACATTGTAACCCACACTGGTGAAAAGGCGTTTGCTTGTACACATTGCAACAAACGCTTTGCCCAAAGAGTACAATGTACGGTTCATATGAGAACTCATACGGGAGATAGACCATTTTTGTGTCACGTTTGTAAATCTACGTTCACTCAAAAGAGCCATCTCATGGGTCATATGTTAACTCATACTGGCGAAAAACCGTTCAAATGTGATGTTTGTCCTAAACAGTTTCGTAAAATTAACGCACTCAACATTCACAAACAAAGTCATAGtaaaaaaccatttcagtgtagATCGTGCAGTTTTCTATTTCGTGATGGCGAAACGTTACGTAGACATATTGGAAAGCATCTAAGCGGTCGTTTGCCTATGAAAAACAAattagtaataaacaaaaaatcgaaacaaatattaattgataaacttaaagatgatattagaaagATGGGTTTTATTAAAAGAGAACTTGTTGGAAATGGTTCGTCAAATAAAGGTGTCGTATATTGTGATGTTTGTTTAAGAAGTTTTTCTAGCACTTTTCACCTTGGTAGACACATGCGAATACATAATTAA
Protein Sequence: MENVCRTCLRVIESTYSITYLYGSKKSSEAVSIRQKLQACVPELTLDIVADPAICSTCTSALTFAFQFRSTCLQTEKTLYKCIQSRRKHNPNFTDLLSTNDLLQIARKGIQDEHSYSYAERYSPVDNSCDESSSDQETQSVSLSNRVQSSLGEIVKKVNTAEKKRNSGDKKVNTAVKKVKPVNEPSFNIKTSPKKYTNKNKVKTSPKSKNLPAPSSTINFEHITIKPDFPSESVKKVSSLPLSKSIDKLIKKLKDHADHDCGTIVNTDLGVLSANSPKSKVRKMPKIRAATNKRERDEPLEDASKKRQKLSLGTRQINIKRTCRGQKSPNRATNTNEKVVTKKEASTDESNDSEGSVGNFNVTAYVKPESSFRYQCNRCNKGYKFKSHFDVHLKSHIIKKLFSCPICNKDFTQEKYLKTHAMLHTNTGLYQCDLCSKYLSSSTALKRHIVTHTGEKAFACTHCNKRFAQRVQCTVHMRTHTGDRPFLCHVCKSTFTQKSHLMGHMLTHTGEKPFKCDVCPKQFRKINALNIHKQSHSKKPFQCRSCSFLFRDGETLRRHIGKHLSGRLPMKNKLVINKKSKQILIDKLKDDIRKMGFIKRELVGNGSSNKGVVYCDVCLRSFSSTFHLGRHMRIHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -