Basic Information

Insect: Malthinus seriepunctatus
Gene Symbol: -
Assembly: GCA_963924605.1
Location: OZ004604.1:22006122-22008369[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.056 3.9 8.6 0.1 2 23 75 96 74 96 0.96

2 15 0.13 9.2 7.4 1.1 1 23 102 124 102 124 0.98

3 15 0.0004 0.028 15.3 2.9 1 23 220 242 220 242 0.98

4 15 0.004 0.28 12.2 2.8 1 23 293 315 293 315 0.96

5 15 0.00065 0.045 14.7 1.2 1 23 321 343 321 343 0.98

6 15 2.3 1.6e+02 3.5 1.3 12 23 349 360 348 360 0.90

7 15 0.00033 0.023 15.6 3.1 1 23 366 388 366 388 0.97

8 15 2.5e-06 0.00017 22.3 1.3 1 23 394 416 394 416 0.99

9 15 7.7e-05 0.0054 17.6 0.2 1 23 422 444 422 444 0.98

10 15 3.7e-05 0.0026 18.6 0.5 1 23 449 471 449 471 0.98

11 15 0.012 0.84 10.7 3.2 1 23 477 499 477 499 0.96

12 15 0.00065 0.045 14.7 2.5 1 23 505 527 505 527 0.99

13 15 0.00043 0.03 15.2 0.9 1 23 536 558 536 558 0.98

14 15 2e-06 0.00014 22.6 0.4 1 23 564 586 564 586 0.99

15 15 0.011 0.74 10.9 8.0 1 23 592 614 592 614 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.056	3.9	8.6	0.1	2	23	75	96	74	96	0.96
2	15	0.13	9.2	7.4	1.1	1	23	102	124	102	124	0.98
3	15	0.0004	0.028	15.3	2.9	1	23	220	242	220	242	0.98
4	15	0.004	0.28	12.2	2.8	1	23	293	315	293	315	0.96
5	15	0.00065	0.045	14.7	1.2	1	23	321	343	321	343	0.98
6	15	2.3	1.6e+02	3.5	1.3	12	23	349	360	348	360	0.90
7	15	0.00033	0.023	15.6	3.1	1	23	366	388	366	388	0.97
8	15	2.5e-06	0.00017	22.3	1.3	1	23	394	416	394	416	0.99
9	15	7.7e-05	0.0054	17.6	0.2	1	23	422	444	422	444	0.98
10	15	3.7e-05	0.0026	18.6	0.5	1	23	449	471	449	471	0.98
11	15	0.012	0.84	10.7	3.2	1	23	477	499	477	499	0.96
12	15	0.00065	0.045	14.7	2.5	1	23	505	527	505	527	0.99
13	15	0.00043	0.03	15.2	0.9	1	23	536	558	536	558	0.98
14	15	2e-06	0.00014	22.6	0.4	1	23	564	586	564	586	0.99
15	15	0.011	0.74	10.9	8.0	1	23	592	614	592	614	0.98

Sequence Information

Coding Sequence: atgatGGCCAAAACAGAGAATGTTGATTGGGAAACTGCTCCTTCCAATTTAGtaatcgTTAAAGACGAAGAATTGataattgaagaaaaacatATCGTCGATGGAATTCAAAACGTGGAAATTGAATACCTTGAATACGGCGAGAATAACCCAAATGACACTGATGTTTCAGTACATGAGCAGACGACAAACAATAATTGTGAATCAAACGAAAACTTAAAAGTGTGTACTTTATGtgggttaaattttttaaatgatgatCTATTACAAATTCATATAAAAGCCCACAACCTCGCAGATTATTACAAATGTGATTTTTGCGAATTTAAAAGCCAAAGTAATTTAGAACTCTTCAACCACTTATTAATACACACCAAGGAGAAGGAATATGAGTGCCATGTTTGTGTTTACAAAAGTATAACAAAATTATGCTTAGAAGCAGATATGCTAAAAGATAGTATTATCGAGTCTATGAAAAGTCAGTCGGAGTATTCTAAAAGTGAAGAGTCATGTACGTATACCAATACTACAATTTCTAACGAACCCTCAACATGTGAACCGTTGAATTACGAGAATTCATTCAAAACAAAAGTAGAACAAACTGTTCCTGCTAGTAAGCCTAAAAGCCCCAAAAAACTGGTAACGAAGACGAAGCAGTATTGTTGTGAATTATGTGATAGGTTATTTGCCGacagaaaatctttaaaaaccCATCGTGAAACACATACTCTTCAGAAACCATCTACTTGTGAGCTTTGTGATTACACAACTAAACCAGAAGACAAAAAATTGAGCAAATGTTATAGTTGTTATAAATCTTTCAGATGTGTAAATTGTTGTGTAGTTCATAGAAGACAATGTACGAAGCGAAGACAATTCTTGTGTGAAATATGTGGTACTAACTTTACTTGtccattttacttaaaaattcattatcGTAAACATACCGGTGAGAGACCATTTCCTTGTCAACTTTGTAAGTATAGAGCTACAAGTAAAAAGTACCTGATATTACATATGCAAACACATTCGaaagaaaaaaaAAATCGAAGAAGCTTAGCAATGCACATGCGGACTCATTCTGGAGAAAAACCATTCAAATGCGACGTTTGTGATTATTCTTGTACGTTTAAAACTAGCTTAACATCCCATCAGGCAGAACATACAGGTGTAAATCCATTTGAGTGTAGTGTTTGTAACAATACGTTTAGAACTAGACCAAAATTAACAGTCCATATGCGAACACATactggagaaaaaccatttaagtGCGACGTTTGTGATTATTCTGGTTCATCTAAACCTGACTTAACATCGCATATGATACAACACACAGGCAACCCATTTGAGTGTGATGTTtgtaataagaaatatagaacTAAAGCAATATTAGCAGTCCATATGCGAAGACATactggagaaaaaccatttaaatgcaACGTTTGTGATTTTAGTTGTGCAACTCAAGGTCGCTTAACATACCATAAGGTCCGACATACCGGCGAAAAATCATTTAAGTGTAAAATTTGCGAGTACAGTACTGTATACTATAGTAGTTTAATGCTTCATAGAAAAAAACATGCAGATCCTTCCACTATTAAGACATTTGAATGTGATAAATGTGATTTCACAAACACGAACAAAGCAAATATGCAACGTCATATGCTAGTTCATACTGGTGAGAAGCCATATCAATGTAGAATATGTTGGGTAAAATTTTCTCAACCAAGTGGTTTAAAAATTCATATGAACAAACACACTGGAGAAAGGCCTTTTCATTGTAATTTATGTGATTATAAATGCACCAAAAAACAGTATTTAGAAAAACATCAATTGAAACACGCTTCTACTAAGGAATGA
Protein Sequence: MMAKTENVDWETAPSNLVIVKDEELIIEEKHIVDGIQNVEIEYLEYGENNPNDTDVSVHEQTTNNNCESNENLKVCTLCGLNFLNDDLLQIHIKAHNLADYYKCDFCEFKSQSNLELFNHLLIHTKEKEYECHVCVYKSITKLCLEADMLKDSIIESMKSQSEYSKSEESCTYTNTTISNEPSTCEPLNYENSFKTKVEQTVPASKPKSPKKLVTKTKQYCCELCDRLFADRKSLKTHRETHTLQKPSTCELCDYTTKPEDKKLSKCYSCYKSFRCVNCCVVHRRQCTKRRQFLCEICGTNFTCPFYLKIHYRKHTGERPFPCQLCKYRATSKKYLILHMQTHSKEKKNRRSLAMHMRTHSGEKPFKCDVCDYSCTFKTSLTSHQAEHTGVNPFECSVCNNTFRTRPKLTVHMRTHTGEKPFKCDVCDYSGSSKPDLTSHMIQHTGNPFECDVCNKKYRTKAILAVHMRRHTGEKPFKCNVCDFSCATQGRLTYHKVRHTGEKSFKCKICEYSTVYYSSLMLHRKKHADPSTIKTFECDKCDFTNTNKANMQRHMLVHTGEKPYQCRICWVKFSQPSGLKIHMNKHTGERPFHCNLCDYKCTKKQYLEKHQLKHASTKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -