Basic Information

Insect: Malthinus seriepunctatus
Gene Symbol: -
Assembly: GCA_963924605.1
Location: OZ004600.1:80093196-80097132[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.25 18 6.5 0.5 1 10 466 475 466 489 0.78

2 12 0.00038 0.027 15.4 1.5 2 23 495 515 495 515 0.97

3 12 0.00058 0.041 14.8 0.2 1 23 521 543 521 543 0.96

4 12 5.6e-07 3.9e-05 24.3 0.7 1 23 549 571 549 571 0.98

5 12 5.4e-06 0.00038 21.2 2.6 1 23 577 600 577 600 0.97

6 12 0.00034 0.024 15.6 1.4 1 23 615 637 615 637 0.93

7 12 0.37 26 6.0 0.1 2 23 643 664 642 664 0.95

8 12 9.1e-05 0.0064 17.4 2.9 1 23 706 728 706 728 0.97

9 12 0.0011 0.076 14.0 0.7 1 23 734 756 734 756 0.96

10 12 3.7e-05 0.0026 18.6 1.7 1 23 762 784 762 784 0.98

11 12 3.2e-07 2.3e-05 25.1 0.2 1 23 790 812 790 812 0.99

12 12 0.00011 0.0078 17.1 2.0 1 23 818 840 818 841 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.25	18	6.5	0.5	1	10	466	475	466	489	0.78
2	12	0.00038	0.027	15.4	1.5	2	23	495	515	495	515	0.97
3	12	0.00058	0.041	14.8	0.2	1	23	521	543	521	543	0.96
4	12	5.6e-07	3.9e-05	24.3	0.7	1	23	549	571	549	571	0.98
5	12	5.4e-06	0.00038	21.2	2.6	1	23	577	600	577	600	0.97
6	12	0.00034	0.024	15.6	1.4	1	23	615	637	615	637	0.93
7	12	0.37	26	6.0	0.1	2	23	643	664	642	664	0.95
8	12	9.1e-05	0.0064	17.4	2.9	1	23	706	728	706	728	0.97
9	12	0.0011	0.076	14.0	0.7	1	23	734	756	734	756	0.96
10	12	3.7e-05	0.0026	18.6	1.7	1	23	762	784	762	784	0.98
11	12	3.2e-07	2.3e-05	25.1	0.2	1	23	790	812	790	812	0.99
12	12	0.00011	0.0078	17.1	2.0	1	23	818	840	818	841	0.95

Sequence Information

Coding Sequence: ATGTTTCCTAAAAACAAAAACGATAAAGAAATATGGTTTGCAAAAATAGTCTTAAATCCTGTGCTTTTAGAAGAAGCTAATAAAAACTATGTAAGATTTAGACGGCGTTACGGCGTGTGCGGCTTGCATTTTGAATTGAGTCAATATCAAACTAGTGAAAAAAAGAAACTTAATCGAAATGCAGTGCCAACAATCGTCTCTCTAGATGGGAAGTTAGATTACGGTAGGAAACCGACAGTTACTTTACCCAATAAAGAAACTGAAACAATACAACCAGAAAAACCACAACGTACTATAAAAGAACCTGTATATATGTATGatGATATAATAATGGGATATTATGAAGAACATATAAAACAAGTGGATGACACTGTAACGCTAGATGAATTACCAGAAAGGTCAGATGAGGAGATGAGAGGAGAGGAAAAATTAGAggaaaaattagaagaaaaaccAATGAAAGtaaaatatAAGACAAGGACTTGGCGTAAATGTGCAGTACCAAATTGTGTAAATGCCAAAACTAACTGGAACGCTGCTTATTTCACATTTCCAATGGATCAAAAATTACTTGAAGAATGGTTGAACGCAATTAAAAACCctaaattaacattattaaatacGGAAAAAACTGAAAAGATAAGAAGAAATCATGGAGTTTGTGCACGCCACTTTGAAGATTCTCAATTTAAATCAATTCGGAAGTTGTCGTTGAAATCAAAAGCCGAAATTCCTTGCAAGTTTTTATCAGAAGAGGAAGAACCAGACCCTATAAATGGATTACTTCTTCAAGTTGATCAAGGAAACGTGGGTACAGTGGTTTCTCAAATTCAAATGTCTGTTACAACTACCGTAACTGACATTGATAAAGAATCGTCGTGCCGAGTATGTTTAACAAAGACCGatcctaaaaatttatattgctTATTTGGAACGAATGCAATGTTTGAAGAACTATCTGTTGCAGCAGCTTTACAAGATTGTTTCAATATTTATttaAAAGAAGACGAAGAACTTCCAAACTACGTTTGTATTAATTGTGCATCCAGCACACTGCAAGCATATACATTTAGAAGATGTATTATAAAATGTCAATCAGTTTTAAAGTCGCAGAAAGTGGAAAAAGAAGATGACGAACTTAATCCAATAAATTTATCACCACAAGgaattttattcgattgtttaaCAAAGGACAAAACTGAAGATGTTGAACATACTATAAACAATGAAATTTCTGCTGAAGTATTTGAAGACAAAAAATGTGATCCTTTAATAGACCATAGTTACactaaagaaattataatagaaGATGAAAAACCTGCTGAGATTTTgccaacaaaaaaaaaagtaaaaagcgCCCCTGACAAGTGGTGGTTAAAAGAAAGAGGGCCTCCGTATCAGTGTAAAATTTGTGGTCGAAATTATGGTGTAAGATACTACGCATTTTATATGCACGTTCGTGCCCATCGAATGAACAAACCTTCATGTTCGCAATGTGGGAAAAAGTTTactagagataaaatgataGTTCACATGCGAAGTCATACAAAAGAGAAACCATTTGTTTGTGATCAATGTCCGGCTCGTTTTACAATAGAAGGAAATTTAAAACGTCACTTGTATTTGCATTCAGGTGAAAAGTTGTATGTTTGTGATGAGTGTGGTAAAGcTTTTACCCAATCGACAACTCTAATGAGTCACAAACAAACTCATTCGAAAGAAGTTCAATTTGTTTGTGAATATTGTGGCAAAATTTGCACAACTAACGGAAGTTTGCAAACACACATTCGTCAtattcataaatttattaaaagggaGGAAGCGGgcgattcaataaataaatatacttGTCAAGAATGTGATAAAGtttttaaatcgaAGGCTTCTTTAAGTTTTCATTCTAAAATTCACACATTCGTTAAACTAGAATGTAACCTATGTACTAAAATATTGTACTCGGATAATAATTATGATGTTCACATGCTGTGGCATCGTGTAATAGAAACTGACACAGCGAATGATGTTATTAAGAAGTGGGAATGTGAATTATGTAATGATATACATGAAGATCGAGAAGTATTAGCTTCTCATGTACTTTCGCATTCAGATCTACAGTTTGACTGTAATTATTGTTCTAAATCATTTCCTAACAGACAGGCTCTTGTGCATCATTCACGAAGACATTCagATGAACGACCATTTGCATGTCGTTCGTGTCCGAAGACGTTTAAATATGTTGCTACGTTACGACAACACGAAAAAGTTCATACTGGTGAAAGACCTTATCGATGTGACATTTGTGAAAGACAGTTTTCCCAGCAACAACAATTAATAAGTCATAAATatactcatacaggtgaaaaaaaaTATGTGTGTCCTTATTGTGGAAAAGCATTCGCTTTAAATGGCAATTTAACTGTTCATAAAAGACGACACACTGGTGAAACACCATACGTTTGTGACGTATGTCTCAAAGGATTTTATGATTCGAGTAGTTTGAAAAAGCATAAAACTATACATCATCGACGTTGA
Protein Sequence: MFPKNKNDKEIWFAKIVLNPVLLEEANKNYVRFRRRYGVCGLHFELSQYQTSEKKKLNRNAVPTIVSLDGKLDYGRKPTVTLPNKETETIQPEKPQRTIKEPVYMYDDIIMGYYEEHIKQVDDTVTLDELPERSDEEMRGEEKLEEKLEEKPMKVKYKTRTWRKCAVPNCVNAKTNWNAAYFTFPMDQKLLEEWLNAIKNPKLTLLNTEKTEKIRRNHGVCARHFEDSQFKSIRKLSLKSKAEIPCKFLSEEEEPDPINGLLLQVDQGNVGTVVSQIQMSVTTTVTDIDKESSCRVCLTKTDPKNLYCLFGTNAMFEELSVAAALQDCFNIYLKEDEELPNYVCINCASSTLQAYTFRRCIIKCQSVLKSQKVEKEDDELNPINLSPQGILFDCLTKDKTEDVEHTINNEISAEVFEDKKCDPLIDHSYTKEIIIEDEKPAEILPTKKKVKSAPDKWWLKERGPPYQCKICGRNYGVRYYAFYMHVRAHRMNKPSCSQCGKKFTRDKMIVHMRSHTKEKPFVCDQCPARFTIEGNLKRHLYLHSGEKLYVCDECGKAFTQSTTLMSHKQTHSKEVQFVCEYCGKICTTNGSLQTHIRHIHKFIKREEAGDSINKYTCQECDKVFKSKASLSFHSKIHTFVKLECNLCTKILYSDNNYDVHMLWHRVIETDTANDVIKKWECELCNDIHEDREVLASHVLSHSDLQFDCNYCSKSFPNRQALVHHSRRHSDERPFACRSCPKTFKYVATLRQHEKVHTGERPYRCDICERQFSQQQQLISHKYTHTGEKKYVCPYCGKAFALNGNLTVHKRRHTGETPYVCDVCLKGFYDSSSLKKHKTIHHRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00950922;
90% Identity: iTF_00950922;
80% Identity: iTF_00950922;