Basic Information

Insect: Malthinus seriepunctatus
Gene Symbol: -
Assembly: GCA_963924605.1
Location: OZ004602.1:14805702-14809050[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8.6e-06 0.0006 20.6 1.2 1 23 143 165 143 165 0.97

2 15 0.007 0.49 11.4 5.9 1 23 171 193 171 193 0.96

3 15 0.01 0.72 10.9 0.4 1 21 293 313 293 315 0.94

4 15 0.4 28 5.9 0.1 2 23 322 344 321 344 0.95

5 15 5.3e-07 3.7e-05 24.4 3.3 1 23 374 396 374 396 0.97

6 15 0.0063 0.44 11.6 0.0 1 23 409 431 409 431 0.94

7 15 0.024 1.7 9.7 0.0 1 23 437 460 437 460 0.93

8 15 0.071 5 8.3 3.7 2 23 468 489 468 489 0.90

9 15 0.00011 0.008 17.0 3.7 3 23 497 517 495 517 0.98

10 15 0.0029 0.2 12.6 0.4 2 23 523 544 522 544 0.96

11 15 1.2e-05 0.00081 20.2 0.4 1 23 552 574 552 574 0.98

12 15 0.005 0.35 11.9 0.2 3 23 582 602 580 602 0.97

13 15 0.00016 0.011 16.6 0.3 1 23 608 630 608 631 0.95

14 15 0.35 24 6.1 0.2 1 23 645 667 645 667 0.96

15 15 0.00043 0.03 15.2 0.1 1 20 993 1012 993 1015 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8.6e-06	0.0006	20.6	1.2	1	23	143	165	143	165	0.97
2	15	0.007	0.49	11.4	5.9	1	23	171	193	171	193	0.96
3	15	0.01	0.72	10.9	0.4	1	21	293	313	293	315	0.94
4	15	0.4	28	5.9	0.1	2	23	322	344	321	344	0.95
5	15	5.3e-07	3.7e-05	24.4	3.3	1	23	374	396	374	396	0.97
6	15	0.0063	0.44	11.6	0.0	1	23	409	431	409	431	0.94
7	15	0.024	1.7	9.7	0.0	1	23	437	460	437	460	0.93
8	15	0.071	5	8.3	3.7	2	23	468	489	468	489	0.90
9	15	0.00011	0.008	17.0	3.7	3	23	497	517	495	517	0.98
10	15	0.0029	0.2	12.6	0.4	2	23	523	544	522	544	0.96
11	15	1.2e-05	0.00081	20.2	0.4	1	23	552	574	552	574	0.98
12	15	0.005	0.35	11.9	0.2	3	23	582	602	580	602	0.97
13	15	0.00016	0.011	16.6	0.3	1	23	608	630	608	631	0.95
14	15	0.35	24	6.1	0.2	1	23	645	667	645	667	0.96
15	15	0.00043	0.03	15.2	0.1	1	20	993	1012	993	1015	0.94

Sequence Information

Coding Sequence: ATGGAGGAAGGATATACCTTAGTCTGGGAGGATGGGAATGCAGTTGTCCAAAATGAGGAAGTCATATGCGATATGGAAGACGAGATGGCAGGGATGGAACAGGGCTCGGAAGACTATTCCGATGTTTGTGAAGAGATCGTTATACAGGGCACtaacaatattaaaattgaaaatgcaaATTCGTGCAGAGGCGGAAATATTATGTACGTTACCGAAGACGATATGATGGTAATGCAAGAAGCTACTGATGTTCAGTTCGACgaaaattttgtagaaatatcTACTGAAGAAGTAATAACCGATTCTTGGAACGAAAATTGTTCAGAAATTGTCGTCGGTTCTGAAGAACATGTAGAAGAACAACCAACTGAAGATGTCGAAATTCCTTTACCTACTGATCAAGATGAATATACAGCAGCACGACCTTATCCTTGTGATTTTTGTAGTCGTAGATTTAGTAAAAAAGcaaatttacaaaatcacaTGGTATCTCATCAGTCAGATCGCCCTCATTGTTGTAATTTATGTGGAATTCGTTACATACGAAAGTGTGATCTTATGAATCATTTAAAAATCCACGCTTACAGTCCAGATGGTGATGGTATGGAGGAAGAAGTACAAAATGAATTTGATGTAGAAAAAATCAATAAGCGTCCTAAaccgtttattaaaaaaagaaaaaataaaatcaaaattaaagaagaagagGATAAGAATGCATCGAGTTCGAGATCTTATGACTATGTGGATGAGGATGTTAGACTTATGGAAACTATGGAAAGTAGTGGTTCAAGATCTGATTATTCGAGTTATCATCTACCAGAAGAAAACACGTTAACTGAACCCAGGTTTCCTGTTAGAGATCCGCGGAAACCGTTTGTTTGCCAACAGTGTGGTGTAGGATTTGCAAGGGAAAAGGCTTTAGCTTCGCACGCACGCTGTCACGGGGGAGATAGTCCATTAGAATGTAGAACTTGTGAGGAAGTTTTTTGGGATGTTGCTCAAATGCGTGAACATATACGTGTGAAACATGGTGGAATTGAACAGGATTATGAAGAAGAAGATGACGACGACGATAATGATGAAGATTTTTCAGatGATGATTCAAAATTTGGTCAATTCTTCTGCCCCACTTGTGGTATGACATTTCACAGACAAGATAATTTGAAAAGACATCAAAGGGTTCACGTAAAAGAAGAAATGTCCAAAGAAGTCGGTTTTGGTCACATTTGCAACGTTTGTGGAGAATCTTTTCCTGAAGCTTTGGAATTATTAGCTCATGCAGAAGTTCATGCAAGAGGTTGGGAACATCGCTGTATGATATGTGGTGAAGTTTTCGTCGATGACGACGCAGTTGCGAGTCACGTTTCTGTTAAACATGGTAAAAATTTGCCTCCAAACACTTGTATGATGTGCGGTCGAACGTGCAAAGATCGCCGAACGCTGTTAAAACATTCATTCGAACATTCGAGAGAAAAAACGTTTGGTTGTTCGAAGTGTGATAAGACGTTTCATAATAAGGCTAGACTAAAACGTCACATGATTTCGCATAGAAATAAAGTTGTCTCTTGTGAAGAATGTGGAGAAAATTTCCCAGACGGTCGGTCTCTTATGAATCACAGGCATAGCCACAGCAGCGTTTCTGGACGACACTTTCCATGTAGGGAATGTGGTAAAACGTTTGGTTCTAGAAGTTCACAGCAAATTCATATCCGGATTCACACCGGAGAAAGACCTTATGGGTGTAGATTCTGTTGGAAAGCTTTTGCAGATGGTGGAACTTTGCGTAAACACGAACGTATTCATACCGGTGAAAAACCATATGCTTGTGCAGTATGTCCTCGAGCGTTTAATCAACGAGTTGTTTTGAGAGAACACATCCGTTCTCACCATTCGGGACCAGATTCGAGTTTAAATCATACCGTAACTCCTTACTCCTGTGCAGTCTGTTCCGATTTATTTGCTACGTCGCAAGATTTGATTGTTCACTTGATTCATCATTGTGATTTAAATACCGCTATGAAACGACAACCACAGgtGGGGCCTCGAAAATATAAGAGAAGGCGTAAATTAAAACCTCACGAATTGGAAATGATGTCTTCACAtaacgaagaagaagaagatatGACCGATTCAGAAAACGAGTACAAGaagaaaataataagaaaaccTAAAAAGACACCTCCTAAGACTACAGACATTGAAGAAAATTATGTCGAAGTTTATAACAGTTTTACTTCCGCAATTGAAAACATCAACTCGATTATGAATAATTCTAAAACtaataaagtaaaaagaaaaactaagcAAGAGTCTCCTGTAGTGCCCTCACGACCGAAAATGATTCATACACAAAAAACTAGAGTACCTGTCGATATGAATGATGGTGGCAAAGTACGTCATAAAATGAAGACGTTAGTTACTCATACTCAACCGACAGAGTTGAAATCGGCGACTGGCGAACGTATTCGCCCTCGCACCAAAAATGTCAGTTATCATGTGCTTCAATCAGAAAAATTCCCAATCGCCACCTTCCCTGATGATGACACGGAGGAAGCCGTCAATAACCTTATTGCAAGTGACGAAACTTTACAAAACAGTGAACAATCTCAAACCAACGGTATTATAGAAAATCCACCAGAAATAGCTAGCGAACAAACAGTAGAAACCGATACACCCACACCTACAAATCTAATAAAAGTTTCAAGTTCCCCACCACCTAAAAGACAATACAGTTTAAGGCCGGGACGAACAATTATAGGACCTGGTAACAAAGTAGTTCGTTTTGTTAAAAGTGGTATGTTGGtttcgaaaaataaaaagatcaaAGAAGAGTGTGACAATACAATAATTGAACAAGACCCCGAATCTGCATTACAGGAAATGTTTGAACCTATAATTAAACAAGAATTTATATCGGATCCGAGTCCATTACACGAATTGGCCGAATTATCTGCACAACACGCTCAAAATATCTTTAGATGTGAAATGTGCAGCGAAGTGTTTTCTGATCGTGATCAATTGTTAGTGCACGTGCCTATTCATATCTGA
Protein Sequence: MEEGYTLVWEDGNAVVQNEEVICDMEDEMAGMEQGSEDYSDVCEEIVIQGTNNIKIENANSCRGGNIMYVTEDDMMVMQEATDVQFDENFVEISTEEVITDSWNENCSEIVVGSEEHVEEQPTEDVEIPLPTDQDEYTAARPYPCDFCSRRFSKKANLQNHMVSHQSDRPHCCNLCGIRYIRKCDLMNHLKIHAYSPDGDGMEEEVQNEFDVEKINKRPKPFIKKRKNKIKIKEEEDKNASSSRSYDYVDEDVRLMETMESSGSRSDYSSYHLPEENTLTEPRFPVRDPRKPFVCQQCGVGFAREKALASHARCHGGDSPLECRTCEEVFWDVAQMREHIRVKHGGIEQDYEEEDDDDDNDEDFSDDDSKFGQFFCPTCGMTFHRQDNLKRHQRVHVKEEMSKEVGFGHICNVCGESFPEALELLAHAEVHARGWEHRCMICGEVFVDDDAVASHVSVKHGKNLPPNTCMMCGRTCKDRRTLLKHSFEHSREKTFGCSKCDKTFHNKARLKRHMISHRNKVVSCEECGENFPDGRSLMNHRHSHSSVSGRHFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDSSLNHTVTPYSCAVCSDLFATSQDLIVHLIHHCDLNTAMKRQPQVGPRKYKRRRKLKPHELEMMSSHNEEEEDMTDSENEYKKKIIRKPKKTPPKTTDIEENYVEVYNSFTSAIENINSIMNNSKTNKVKRKTKQESPVVPSRPKMIHTQKTRVPVDMNDGGKVRHKMKTLVTHTQPTELKSATGERIRPRTKNVSYHVLQSEKFPIATFPDDDTEEAVNNLIASDETLQNSEQSQTNGIIENPPEIASEQTVETDTPTPTNLIKVSSSPPPKRQYSLRPGRTIIGPGNKVVRFVKSGMLVSKNKKIKEECDNTIIEQDPESALQEMFEPIIKQEFISDPSPLHELAELSAQHAQNIFRCEMCSEVFSDRDQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00950107;
90% Identity: iTF_00950107;
80% Identity: -